| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g22575 | 1:38,228,264-38,230,711 | + | C2H1g13756 | CX1g003091 | LOC_Os01g74600 | Os01g0977400 | - | Detail |
| C1H1g07474 | 1:38,234,552-38,247,323 | - | C2H1g30278 | CX1g002702 | LOC_Os01g74610 | Os01g0977600 | - | Detail |
| C1H1g10757 | 1:38,251,328-38,252,363 | - | C2H1g08075 | CX1g002165 | LOC_Os01g74630 | Os01g0977901 | - | Detail |
| C1H1g31840 | 1:38,257,199-38,262,236 | - | C2H1g06471 | CX1g001384 | - | - | - | Detail |
| C1H1g26867 | 1:38,263,571-38,267,778 | + | C2H1g27116 | CX1g001353 | LOC_Os01g74640 | Os01g0978000 | OsUCP1 | Detail |
| C1H1g06588 | 1:38,269,207-38,274,575 | - | C2H1g18952 | CX1g004874 | LOC_Os01g74650 | Os01g0978100 | - | Detail |
| C1H1g16241 | 1:38,281,442-38,282,425 | + | C2H1g23413 | CX1g002707 | LOC_Os01g74660 | Os01g0978400 | - | Detail |
| C1H10g04037 | 10:33,350-33,760 | + | C2H10g06876 | - | - | - | - | Detail |
| C1H10g10615 | 10:34,209-46,905 | - | C2H10g10175 | CX10g007625 | LOC_Os10g01044 | Os10g0100300 | - | Detail |
| C1H10g12715 | 10:54,519-61,604 | + | C2H10g03638 | CX10g008235 | LOC_Os10g01060 | Os10g0100500 | - | Detail |
| C1H10g01786 | 10:129,604-130,545 | - | C2H10g03040 | CX10g009692 | LOC_Os10g01080 | Os10g0100700 | OsPDX1.2 | Detail |
| C1H10g00834 | 10:151,473-153,881 | + | C2H10g29939 | CX10g010378 | LOC_Os10g01100 | Os10g0101000 | SDRLK-44 | Detail |
| C1H10g23663 | 10:160,295-162,859 | - | C2H10g13492 | CX10g008057 | LOC_Os10g01110 | Os10g0101100 | - | Detail |
| C1H10g17975 | 10:171,468-173,534 | - | C2H10g26137 | CX10g009812 | LOC_Os10g01134 | Os10g0101200 | SCP45, OsSCP45, OsSCP46, SCP46 | Detail |
| C1H10g24975 | 10:177,832-178,119 | - | C2H10g26137 | CX10g008057 | LOC_Os10g01110 | Os10g0101200 | SCP45, OsSCP45, OsSCP46, SCP46 | Detail |
| C1H10g10888 | 10:226,282-227,340 | - | C2H10g06494 | CX10g010129 | LOC_Os10g01290 | Os10g0102400 | - | Detail |
| C1H10g10334 | 10:264,396-270,853 | + | C2H10g14615 | CX10g008814 | LOC_Os10g01380 | Os10g0102900 | - | Detail |
| C1H10g06516 | 10:283,832-286,877 | - | C2H10g02203 | CX10g010069 | LOC_Os10g06140 | Os10g0103140 | - | Detail |
| C1H10g15181 | 10:317,860-319,188 | - | C2H10g20902 | CX10g007797 | LOC_Os10g01470 | Os10g0103700 | - | Detail |
| C1H10g21883 | 10:336,702-342,737 | - | C2H10g05016 | CX10g008534 | LOC_Os10g01480 | Os10g0103800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g26843 | 1:4,750,245-4,750,844 | - | C1H1g07163 | CX1g002407 | LOC_Os01g10260 | Os01g0199700 | - | Detail |
| C2H1g15755 | 1:4,753,246-4,753,757 | + | - | - | - | - | - | Detail |
| C2H1g21983 | 1:4,754,465-4,761,263 | + | C1H1g01459 | CX1g001007 | LOC_Os01g10280 | Os01g0199900 | - | Detail |
| C2H1g12530 | 1:4,759,885-4,760,309 | - | - | - | - | Os01g0199950 | - | Detail |
| C2H1g11537 | 1:4,762,509-4,765,113 | - | C1H1g26995 | CX1g006987 | LOC_Os01g10290 | Os01g0200000 | - | Detail |
| C2H1g01403 | 1:4,764,199-4,764,535 | + | - | - | - | Os01g0200150 | - | Detail |
| C2H1g00798 | 1:4,767,188-4,768,654 | + | C1H1g02233 | CX1g001007 | LOC_Os01g10280 | Os01g0199900 | - | Detail |
| C2H1g29755 | 1:4,771,673-4,771,900 | + | C1H1g09040 | - | - | - | - | Detail |
| C2H1g04474 | 1:4,775,772-4,776,284 | + | C1H1g04241 | CX1g003266 | LOC_Os01g10310 | Os01g0200200 | - | Detail |
| C2H1g05458 | 1:4,778,185-4,778,632 | - | C1H10g24741 | CX1g004349 | - | - | - | Detail |
| C2H1g25742 | 1:4,780,038-4,785,038 | - | C1H1g07309 | CX1g001960 | LOC_Os01g10320 | Os01g0200300 | OsHB5 | Detail |
| C2H1g13754 | 1:4,788,897-4,795,712 | - | C1H1g18253 | CX1g004279 | LOC_Os01g10340 | Os01g0200400 | - | Detail |
| C2H1g05709 | 1:4,795,975-4,799,864 | + | C1H1g19440 | CX1g005266 | LOC_Os01g10350 | Os01g0200500 | - | Detail |
| C2H1g21530 | 1:4,806,648-4,807,112 | - | C1H1g08742 | CX1g001261 | LOC_Os01g10370 | Os01g0200600 | - | Detail |
| C2H1g04740 | 1:4,807,137-4,807,349 | - | C1H1g28709 | CX1g001261 | LOC_Os01g10370 | Os01g0200600 | - | Detail |
| C2H1g10402 | 1:4,816,249-4,817,100 | + | C1H1g04932 | - | LOC_Os01g10400 | Os01g0200700 | OsMT-3a | Detail |
| C2H1g28750 | 1:4,825,386-4,841,784 | + | C1H1g18217 | CX1g006358 | LOC_Os01g10440 | Os01g0201000 | - | Detail |
| C2H1g25446 | 1:4,843,430-4,847,372 | - | C1H1g30064 | CX1g000033 | LOC_Os01g10450 | Os01g0201200 | - | Detail |
| C2H1g26595 | 1:4,850,790-4,851,053 | - | - | CX1g006703 | - | - | - | Detail |
| C2H1g20579 | 1:4,863,450-4,864,085 | - | - | CX1g002489 | - | Os01g0201250 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |