| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g24870 | 1:38,133,777-38,135,067 | - | C2H1g29036 | CX1g003882 | LOC_Os01g74350 | Os01g0974800 | - | Detail |
| C1H1g25105 | 1:38,136,323-38,136,607 | - | C2H1g11687 | CX1g003190 | - | - | - | Detail |
| C1H1g11140 | 1:38,137,508-38,138,664 | - | C2H1g23261 | CX1g005588 | LOC_Os01g74370 | Os01g0975000 | - | Detail |
| C1H1g20453 | 1:38,142,873-38,143,890 | + | C2H1g00046 | CX1g004945 | LOC_Os01g74410 | Os01g0975300 | - | Detail |
| C1H1g20910 | 1:38,153,106-38,154,141 | + | - | - | - | - | - | Detail |
| C1H1g08219 | 1:38,157,516-38,158,145 | + | C2H1g01068 | CX1g003699 | LOC_Os01g74440 | Os01g0975800 | MADS79 | Detail |
| C1H1g02174 | 1:38,161,270-38,162,104 | - | C2H1g19458 | CX1g006077 | LOC_Os01g74450 | Os01g0975900 | - | Detail |
| C1H1g10248 | 1:38,165,217-38,170,708 | - | C2H1g03008 | CX1g006488 | LOC_Os01g74460 | Os01g0976000 | MON1 | Detail |
| C1H1g23123 | 1:38,171,490-38,179,527 | - | C2H1g29806 | CX1g006587 | LOC_Os01g74470 | Os01g0976100 | - | Detail |
| C1H1g19138 | 1:38,181,108-38,182,238 | - | C2H1g14975 | CX1g000916 | LOC_Os01g74480 | Os01g0976200 | - | Detail |
| C1H1g04013 | 1:38,186,232-38,186,858 | + | C2H1g05558 | CX1g003039 | LOC_Os01g74490 | Os01g0976300 | - | Detail |
| C1H1g31465 | 1:38,188,032-38,192,631 | + | C2H1g15344 | CX1g004080 | LOC_Os01g74500 | Os01g0976450 | - | Detail |
| C1H1g00111 | 1:38,193,283-38,196,868 | + | C2H1g17772 | CX1g003446 | LOC_Os01g74510 | Os01g0976500 | - | Detail |
| C1H1g31006 | 1:38,198,798-38,201,965 | - | C2H1g05896 | CX1g003902 | LOC_Os01g74520 | Os01g0976600 | - | Detail |
| C1H1g13528 | 1:38,204,043-38,207,368 | - | C2H1g11672 | CX1g001345 | LOC_Os01g74530 | Os01g0976700 | - | Detail |
| C1H1g28719 | 1:38,209,476-38,209,986 | - | C2H1g08596 | CX1g005337 | LOC_Os01g74540 | Os01g0976800 | GATA10 | Detail |
| C1H1g02636 | 1:38,212,307-38,216,056 | - | C2H1g27561 | CX1g006826 | LOC_Os01g74550 | Os01g0976900 | - | Detail |
| C1H1g11576 | 1:38,218,231-38,219,115 | + | C2H1g13292 | CX1g000198 | LOC_Os01g74570 | Os01g0977100 | OsTET1 | Detail |
| C1H1g05726 | 1:38,221,483-38,225,848 | + | C2H1g13292 | CX1g000198 | LOC_Os01g74580 | Os01g0977200 | - | Detail |
| C1H1g30613 | 1:38,226,471-38,227,208 | - | C2H1g02664 | CX1g001561 | LOC_Os01g74590 | Os01g0977300 | Os2R_MYB20 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g22986 | 11:837,648-841,629 | - | C1H11g21830 | CX11g011406 | LOC_Os12g02710 | Os11g0120200 | - | Detail |
| C2H11g01727 | 11:856,189-858,539 | + | C1H11g06531 | CX11g013247 | LOC_Os12g02730 | Os11g0120600 | - | Detail |
| C2H11g19747 | 11:863,464-867,543 | + | C1H11g00074 | CX11g013247 | LOC_Os12g02730 | Os11g0120725 | - | Detail |
| C2H11g07452 | 11:867,074-868,939 | - | C1H11g19265 | CX11g013016 | LOC_Os12g02760 | Os11g0121000 | - | Detail |
| C2H11g27746 | 11:879,383-883,925 | - | C1H11g24980 | CX11g012023 | LOC_Os12g02810 | Os11g0121400 | - | Detail |
| C2H11g18565 | 11:896,828-899,519 | - | C1H12g01196 | CX11g012580 | LOC_Os12g02830 | Os11g0123500 | OsSNF7.3 | Detail |
| C2H11g14593 | 11:902,644-905,256 | + | C1H11g13638 | CX11g013051 | LOC_Os11g03070 | Os11g0123600 | - | Detail |
| C2H11g13616 | 11:925,994-928,866 | + | C1H11g05824 | CX11g012864 | LOC_Os11g03110 | Os11g0124300 | OsSCR1 | Detail |
| C2H11g12710 | 11:930,413-930,863 | + | C1H11g21592 | - | - | - | - | Detail |
| C2H11g27808 | 11:935,233-936,979 | + | C1H11g02113 | CX11g011459 | LOC_Os11g03130 | Os11g0124500 | - | Detail |
| C2H11g12455 | 11:947,380-948,702 | + | - | - | LOC_Os12g02890 | - | - | Detail |
| C2H11g30531 | 11:951,321-956,763 | - | C1H11g05866 | CX11g010987 | LOC_Os11g03160 | Os11g0124900 | - | Detail |
| C2H11g22399 | 11:963,864-966,263 | - | C1H11g27495 | CX11g011530 | LOC_Os11g03200 | Os11g0125500 | - | Detail |
| C2H11g17171 | 11:967,139-967,899 | + | C1H11g17257 | CX11g014122 | LOC_Os12g02960 | Os11g0125601 | - | Detail |
| C2H11g18559 | 11:968,375-970,888 | - | C1H11g02962 | CX11g012533 | LOC_Os11g03220 | Os11g0125700 | - | Detail |
| C2H11g08980 | 11:976,812-979,352 | + | C1H11g20891 | CX11g013454 | LOC_Os12g02980 | Os11g0125900 | - | Detail |
| C2H11g29415 | 11:983,955-987,083 | + | C1H11g29922 | CX11g013454 | LOC_Os11g03290 | Os11g0126400 | OsAPY6 | Detail |
| C2H11g14924 | 11:988,457-989,122 | + | C1H11g08382 | CX11g013454 | LOC_Os11g03270 | Os11g0125900 | - | Detail |
| C2H11g07686 | 11:991,696-995,655 | + | C1H11g26767 | CX11g014599 | LOC_Os11g03290 | Os11g0126800 | OsAPY7 | Detail |
| C2H11g20336 | 11:1,002,005-1,003,549 | + | C1H11g12971 | CX11g013912 | LOC_Os11g03300 | Os11g0126900 | NAC122, OsNAC10, ONAC122, NAC122 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |