| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g24474 | 1:2,855,549-2,861,023 | - | C2H1g08155 | CX1g006690 | LOC_Os01g07110 | Os01g0164800 | OsBRCA2 | Detail |
| C1H1g28973 | 1:2,861,627-2,865,314 | - | C2H1g24105 | CX1g006690 | LOC_Os01g07110 | Os01g0164800 | OsBRCA2 | Detail |
| C1H1g28709 | 1:2,866,693-2,868,772 | + | C2H1g23761 | CX1g005149 | LOC_Os01g07120 | Os01g0165000 | - | Detail |
| C1H1g06420 | 1:2,869,020-2,870,975 | - | C2H1g13562 | CX1g003505 | LOC_Os01g07130 | Os01g0165100 | - | Detail |
| C1H1g09488 | 1:2,872,413-2,877,974 | - | C2H1g23637 | CX1g005200 | LOC_Os01g07140 | Os01g0165200 | - | Detail |
| C1H1g11655 | 1:2,915,334-2,918,475 | + | C2H1g08507 | CX1g007089 | LOC_Os01g07200 | Os01g0166100 | - | Detail |
| C1H1g25978 | 1:2,919,050-2,921,284 | + | C2H1g01020 | CX1g002009 | LOC_Os01g07212 | Os01g0166300 | - | Detail |
| C1H1g13936 | 1:2,923,443-2,925,123 | + | C2H1g10111 | - | LOC_Os01g07212 | Os01g0166400 | - | Detail |
| C1H1g07427 | 1:2,940,377-2,942,061 | + | C2H1g02905 | CX1g000127 | LOC_Os01g07250 | Os01g0166700 | - | Detail |
| C1H1g26302 | 1:2,942,833-2,946,371 | - | C2H1g25257 | CX1g005999 | LOC_Os01g07260 | Os01g0166800 | - | Detail |
| C1H1g20393 | 1:2,946,811-2,947,032 | + | C2H1g06988 | CX1g001312 | - | Os01g0167100 | - | Detail |
| C1H1g04419 | 1:2,967,967-2,970,079 | + | C2H1g17311 | CX1g006992 | LOC_Os01g06740 | Os01g0167400 | - | Detail |
| C1H1g22310 | 1:2,970,741-2,973,987 | - | C2H1g15989 | CX1g004676 | LOC_Os01g07310 | Os01g0167500 | - | Detail |
| C1H1g19378 | 1:2,978,815-2,979,883 | + | C2H1g11597 | CX1g004086 | LOC_Os01g07320 | Os01g0167600 | - | Detail |
| C1H1g21201 | 1:2,981,177-2,991,422 | - | C2H1g08925 | CX1g005536 | LOC_Os01g07340 | Os01g0167750 | - | Detail |
| C1H1g22514 | 1:2,993,362-2,995,606 | - | C2H1g08657 | CX1g001588 | LOC_Os01g07350 | Os01g0167800 | - | Detail |
| C1H1g16535 | 1:2,997,247-3,000,528 | - | C2H1g00388 | CX1g004828 | LOC_Os01g07360 | Os01g0167900 | - | Detail |
| C1H1g01854 | 1:3,002,950-3,008,871 | - | C2H1g24620 | CX1g001191 | LOC_Os01g07370 | Os01g0168100 | - | Detail |
| C1H1g14782 | 1:3,014,065-3,015,933 | - | C2H1g00503 | CX1g003480 | LOC_Os01g07376 | Os01g0168200 | - | Detail |
| C1H1g01998 | 1:3,017,575-3,020,622 | - | C2H1g03327 | CX1g005935 | LOC_Os01g07382 | Os01g0168300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g10913 | 8:21,067,651-21,069,042 | + | C1H8g22629 | - | - | - | - | Detail |
| C2H8g20109 | 8:21,080,998-21,087,585 | + | C1H8g11072 | CX8g050517 | LOC_Os08g39350 | Os08g0503200 | - | Detail |
| C2H8g11821 | 8:21,096,317-21,099,344 | + | C1H8g07115 | CX8g050586 | LOC_Os08g39370 | Os08g0503700 | - | Detail |
| C2H8g16030 | 8:21,101,042-21,105,896 | + | C1H8g30228 | CX8g051798 | LOC_Os08g39380 | Os08g0503800 | RCN11, Xyl, OsXylT, RCN11/OsXylT | Detail |
| C2H8g14205 | 8:21,118,627-21,121,651 | + | C1H8g09278 | CX8g052201 | LOC_Os08g39390 | Os08g0504000 | - | Detail |
| C2H8g03769 | 8:21,146,592-21,151,232 | - | C1H8g18887 | CX8g052020 | LOC_Os08g39420 | Os08g0504400 | - | Detail |
| C2H8g15537 | 8:21,152,047-21,152,766 | - | - | - | LOC_Os08g39430 | Os08g0504500 | - | Detail |
| C2H8g01958 | 8:21,154,262-21,162,695 | + | C1H8g31169 | CX8g054735 | LOC_Os08g39440 | Os08g0504600 | - | Detail |
| C2H8g27106 | 8:21,171,047-21,171,559 | + | C1H8g08213 | CX8g053940 | LOC_Os08g39450 | Os08g0504700 | SAP11, OsDOG, OsSAP11 | Detail |
| C2H8g22594 | 8:21,184,983-21,186,254 | + | C1H8g25456 | CX8g053398 | LOC_Os08g39460 | Os08g0504800 | - | Detail |
| C2H8g29790 | 8:21,190,759-21,192,014 | - | - | CX8g051056 | LOC_Os08g39530 | Os08g0505700 | - | Detail |
| C2H8g28041 | 8:21,197,035-21,202,426 | + | C1H9g26058 | CX9g055951 | LOC_Os08g39480 | Os08g0505001 | - | Detail |
| C2H8g29492 | 8:21,208,553-21,213,149 | + | C1H8g25246 | CX8g053863 | LOC_Os08g39490 | Os08g0505200 | - | Detail |
| C2H8g10032 | 8:21,215,616-21,216,830 | - | C1H8g21369 | CX8g052550 | LOC_Os08g39500 | Os08g0505300 | - | Detail |
| C2H8g16371 | 8:21,223,365-21,224,489 | - | C1H8g03346 | CX8g052722 | LOC_Os08g39550 | Os08g0505900 | PGIP6, Ospgip6, pgip6, OsPGIP6 | Detail |
| C2H8g13708 | 8:21,232,861-21,235,968 | + | C1H8g20564 | CX8g053318 | LOC_Os08g39560 | Os08g0506000 | - | Detail |
| C2H8g28309 | 8:21,239,511-21,240,950 | + | C1H8g09970 | CX8g053861 | LOC_Os08g39570 | Os08g0506100 | - | Detail |
| C2H8g06580 | 8:21,240,995-21,243,115 | + | C1H8g09970 | CX8g053861 | LOC_Os08g39570 | Os08g0506100 | - | Detail |
| C2H8g13309 | 8:21,258,218-21,260,281 | + | C1H8g19974 | CX8g053721 | LOC_Os08g39590 | Os08g0506400 | - | Detail |
| C2H8g17243 | 8:21,262,229-21,264,110 | - | C1H8g17337 | CX8g051301 | LOC_Os08g39600 | Os08g0506500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |