| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g10192 | 1:37,983,384-37,983,758 | - | C2H1g13361 | CX1g001721 | LOC_Os01g62605 | Os01g0525350 | - | Detail |
| C1H1g22544 | 1:38,012,853-38,014,658 | + | C2H1g11458 | CX1g004641 | LOC_Os01g74140 | Os01g0972800 | - | Detail |
| C1H1g11871 | 1:38,015,604-38,018,377 | + | C2H1g01506 | CX1g002412 | LOC_Os01g74146 | Os01g0972900 | - | Detail |
| C1H1g20094 | 1:38,020,128-38,022,349 | + | C2H1g06809 | CX1g001376 | LOC_Os01g74152 | Os01g0973000 | - | Detail |
| C1H1g13166 | 1:38,026,253-38,034,717 | + | C2H1g13614 | CX1g005552 | LOC_Os01g74160 | Os01g0973100 | - | Detail |
| C1H1g06879 | 1:38,043,466-38,048,873 | + | C2H1g13614 | CX1g006692 | LOC_Os01g74160 | Os01g0973100 | - | Detail |
| C1H1g09462 | 1:38,060,707-38,062,257 | + | C2H1g12274 | CX1g006692 | LOC_Os01g74160 | Os01g0973100 | - | Detail |
| C1H1g08383 | 1:38,063,641-38,066,390 | - | C2H1g11159 | CX1g005022 | LOC_Os01g74170 | Os01g0973200 | - | Detail |
| C1H1g08747 | 1:38,066,630-38,073,123 | + | C2H1g11244 | CX1g001253 | LOC_Os01g74180 | Os01g0973300 | - | Detail |
| C1H1g24365 | 1:38,073,391-38,076,022 | - | C2H1g02312 | CX1g006642 | LOC_Os01g74190 | Os01g0973400 | - | Detail |
| C1H1g04847 | 1:38,077,455-38,078,176 | - | C2H1g19031 | CX1g001727 | - | - | - | Detail |
| C1H1g17179 | 1:38,078,466-38,082,153 | - | C2H1g00069 | CX1g005214 | LOC_Os01g74200 | Os01g0973500 | OsRLCK57 | Detail |
| C1H1g03340 | 1:38,089,922-38,091,626 | + | C2H1g03909 | CX1g000931 | LOC_Os01g74250 | Os01g0973600 | - | Detail |
| C1H1g14171 | 1:38,097,322-38,101,289 | + | C2H1g15614 | CX1g005461 | LOC_Os01g74280 | Os01g0974000 | - | Detail |
| C1H1g17283 | 1:38,101,504-38,103,123 | + | C2H1g21525 | CX1g000461 | LOC_Os05g02060 | Os01g0974100 | - | Detail |
| C1H1g22123 | 1:38,104,483-38,105,148 | + | C2H1g15720 | CX1g006877 | LOC_Os01g74300 | Os01g0974200 | - | Detail |
| C1H1g01783 | 1:38,106,016-38,115,484 | - | C2H1g08301 | CX1g005460 | LOC_Os01g74310 | Os01g0974300 | - | Detail |
| C1H1g11378 | 1:38,123,392-38,124,753 | + | C2H1g06537 | CX1g003643 | LOC_Os01g74320 | Os01g0974400 | - | Detail |
| C1H1g11600 | 1:38,126,428-38,129,695 | - | C2H1g18112 | CX1g002940 | LOC_Os01g74330 | Os01g0974500 | - | Detail |
| C1H1g07020 | 1:38,130,338-38,132,470 | + | C2H1g17646 | CX1g006503 | LOC_Os01g74340 | Os01g0974701 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g25284 | 4:26,053,158-26,054,280 | - | C1H4g15893 | CX4g035889 | LOC_Os04g51140 | Os04g0600100 | - | Detail |
| C2H4g12319 | 4:26,054,891-26,057,188 | - | C1H4g02523 | CX4g035681 | LOC_Os04g51150 | Os04g0600200 | AOX1A, Ao1-1, AOX1a, OsAOX1a, AOX 1a | Detail |
| C2H4g13155 | 4:26,057,959-26,060,860 | - | C1H4g06092 | CX4g036218 | LOC_Os04g51160 | Os04g0600300 | AOX1B, AOX1b, OsAOX1b | Detail |
| C2H4g11382 | 4:26,062,604-26,064,996 | - | C1H4g28733 | CX4g036257 | LOC_Os04g51166 | Os04g0600400 | - | Detail |
| C2H4g16073 | 4:26,065,855-26,071,021 | - | C1H4g04973 | CX4g033183 | LOC_Os04g51172 | Os04g0600500 | OsBRXL3 | Detail |
| C2H4g00138 | 4:26,079,042-26,083,754 | - | C1H4g07853 | CX4g032625 | LOC_Os04g51180 | Os04g0600800 | COLD1 | Detail |
| C2H4g09942 | 4:26,085,183-26,089,337 | - | C1H4g08504 | CX4g033956 | LOC_Os04g51190 | Os04g0574500 | - | Detail |
| C2H4g25560 | 4:26,102,155-26,103,523 | - | C1H4g18677 | CX4g032272 | LOC_Os04g51240 | Os04g0601400 | - | Detail |
| C2H4g10254 | 4:26,104,987-26,107,216 | - | C1H4g11359 | CX4g033025 | LOC_Os04g51250 | Os04g0601500 | - | Detail |
| C2H4g14874 | 4:26,106,519-26,110,669 | + | C1H4g26178 | CX4g034624 | LOC_Os04g51260 | Os04g0602000 | - | Detail |
| C2H4g01351 | 4:26,111,323-26,112,177 | - | C1H4g02715 | CX4g036413 | LOC_Os04g51270 | Os04g0601700 | - | Detail |
| C2H4g08450 | 4:26,113,702-26,115,692 | + | C1H4g04277 | - | LOC_Os04g51280 | Os04g0601800 | WSP1 | Detail |
| C2H4g18195 | 4:26,116,346-26,119,282 | + | C1H4g31358 | CX4g031538 | LOC_Os04g51300 | Os04g0602100 | - | Detail |
| C2H4g21768 | 4:26,119,417-26,121,708 | - | C1H4g26391 | CX4g033882 | LOC_Os04g51310 | Os04g0602200 | - | Detail |
| C2H4g22043 | 4:26,123,267-26,125,534 | - | C1H4g19881 | CX4g033318 | LOC_Os04g51320 | Os04g0602300 | - | Detail |
| C2H4g12426 | 4:26,127,370-26,131,567 | - | C1H4g05144 | CX4g034293 | LOC_Os04g51330 | Os04g0602400 | - | Detail |
| C2H4g05437 | 4:26,134,548-26,138,254 | + | C1H4g22875 | CX4g033998 | LOC_Os04g51340 | Os04g0602500 | - | Detail |
| C2H4g15861 | 4:26,139,791-26,142,202 | + | C1H4g12838 | CX4g032956 | LOC_Os04g51350 | Os04g0602600 | MPR25 | Detail |
| C2H4g20183 | 4:26,143,347-26,145,256 | - | C1H4g06807 | CX4g034077 | LOC_Os04g51360 | Os04g0602700 | - | Detail |
| C2H4g18022 | 4:26,146,411-26,154,053 | - | C1H4g07013 | CX4g035673 | LOC_Os04g51370 | Os04g0602800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |