| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g10192 | 1:37,983,384-37,983,758 | - | C2H1g13361 | CX1g001721 | LOC_Os01g62605 | Os01g0525350 | - | Detail |
| C1H1g22544 | 1:38,012,853-38,014,658 | + | C2H1g11458 | CX1g004641 | LOC_Os01g74140 | Os01g0972800 | - | Detail |
| C1H1g11871 | 1:38,015,604-38,018,377 | + | C2H1g01506 | CX1g002412 | LOC_Os01g74146 | Os01g0972900 | - | Detail |
| C1H1g20094 | 1:38,020,128-38,022,349 | + | C2H1g06809 | CX1g001376 | LOC_Os01g74152 | Os01g0973000 | - | Detail |
| C1H1g13166 | 1:38,026,253-38,034,717 | + | C2H1g13614 | CX1g005552 | LOC_Os01g74160 | Os01g0973100 | - | Detail |
| C1H1g06879 | 1:38,043,466-38,048,873 | + | C2H1g13614 | CX1g006692 | LOC_Os01g74160 | Os01g0973100 | - | Detail |
| C1H1g09462 | 1:38,060,707-38,062,257 | + | C2H1g12274 | CX1g006692 | LOC_Os01g74160 | Os01g0973100 | - | Detail |
| C1H1g08383 | 1:38,063,641-38,066,390 | - | C2H1g11159 | CX1g005022 | LOC_Os01g74170 | Os01g0973200 | - | Detail |
| C1H1g08747 | 1:38,066,630-38,073,123 | + | C2H1g11244 | CX1g001253 | LOC_Os01g74180 | Os01g0973300 | - | Detail |
| C1H1g24365 | 1:38,073,391-38,076,022 | - | C2H1g02312 | CX1g006642 | LOC_Os01g74190 | Os01g0973400 | - | Detail |
| C1H1g04847 | 1:38,077,455-38,078,176 | - | C2H1g19031 | CX1g001727 | - | - | - | Detail |
| C1H1g17179 | 1:38,078,466-38,082,153 | - | C2H1g00069 | CX1g005214 | LOC_Os01g74200 | Os01g0973500 | OsRLCK57 | Detail |
| C1H1g03340 | 1:38,089,922-38,091,626 | + | C2H1g03909 | CX1g000931 | LOC_Os01g74250 | Os01g0973600 | - | Detail |
| C1H1g14171 | 1:38,097,322-38,101,289 | + | C2H1g15614 | CX1g005461 | LOC_Os01g74280 | Os01g0974000 | - | Detail |
| C1H1g17283 | 1:38,101,504-38,103,123 | + | C2H1g21525 | CX1g000461 | LOC_Os05g02060 | Os01g0974100 | - | Detail |
| C1H1g22123 | 1:38,104,483-38,105,148 | + | C2H1g15720 | CX1g006877 | LOC_Os01g74300 | Os01g0974200 | - | Detail |
| C1H1g01783 | 1:38,106,016-38,115,484 | - | C2H1g08301 | CX1g005460 | LOC_Os01g74310 | Os01g0974300 | - | Detail |
| C1H1g11378 | 1:38,123,392-38,124,753 | + | C2H1g06537 | CX1g003643 | LOC_Os01g74320 | Os01g0974400 | - | Detail |
| C1H1g11600 | 1:38,126,428-38,129,695 | - | C2H1g18112 | CX1g002940 | LOC_Os01g74330 | Os01g0974500 | - | Detail |
| C1H1g07020 | 1:38,130,338-38,132,470 | + | C2H1g17646 | CX1g006503 | LOC_Os01g74340 | Os01g0974701 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g27162 | 9:19,021,887-19,023,725 | - | C1H9g18815 | CX9g057033 | LOC_Os09g38920 | Os09g0497500 | - | Detail |
| C2H9g03456 | 9:19,024,895-19,026,937 | - | C1H9g04134 | CX9g057411 | LOC_Os09g38930 | Os09g0562750 | - | Detail |
| C2H9g09986 | 9:19,040,180-19,040,616 | + | C1H9g07046 | CX9g055362 | LOC_Os09g38670 | Os09g0559600 | - | Detail |
| C2H9g06709 | 9:19,042,621-19,048,413 | - | C1H9g06523 | CX9g055046 | LOC_Os09g38960 | Os09g0563200 | OsHAK18 | Detail |
| C2H9g01538 | 9:19,051,561-19,057,154 | + | C1H9g19754 | CX9g057500 | LOC_Os09g38970 | Os09g0563250 | - | Detail |
| C2H9g16021 | 9:19,057,688-19,061,764 | + | C1H9g21219 | CX9g054934 | LOC_Os09g38980 | Os09g0563300 | TCD9, OsCPn60alpha3, OsCPn60α3 | Detail |
| C2H9g21433 | 9:19,071,960-19,074,845 | + | C1H9g01697 | CX9g056918 | LOC_Os09g39020 | Os09g0563700 | - | Detail |
| C2H9g26806 | 9:19,076,762-19,086,439 | - | C1H9g21274 | CX9g057338 | LOC_Os09g39034 | Os09g0563800 | - | Detail |
| C2H9g27013 | 9:19,092,614-19,094,426 | - | C1H9g07375 | CX9g058103 | LOC_Os09g39060 | Os09g0564000 | - | Detail |
| C2H9g21279 | 9:19,098,085-19,100,923 | - | C1H9g22045 | CX9g058103 | LOC_Os09g39070 | Os09g0564200 | - | Detail |
| C2H9g23865 | 9:19,108,617-19,110,153 | - | C1H9g22045 | CX9g058103 | LOC_Os09g39090 | Os09g0564400 | - | Detail |
| C2H9g13270 | 9:19,121,816-19,124,616 | - | C1H9g22045 | CX9g058103 | LOC_Os09g39110 | Os09g0564600 | - | Detail |
| C2H9g00317 | 9:19,126,925-19,128,682 | - | C1H9g27358 | CX9g058103 | LOC_Os09g39120 | Os09g0564700 | - | Detail |
| C2H9g01274 | 9:19,137,269-19,139,208 | - | C1H9g06269 | CX9g058103 | LOC_Os09g39160 | Os09g0565000 | - | Detail |
| C2H9g29707 | 9:19,176,003-19,178,915 | + | C1H9g06269 | CX9g058103 | LOC_Os09g39160 | Os09g0565000 | - | Detail |
| C2H9g17980 | 9:19,186,630-19,189,149 | - | C1H9g03665 | CX9g055784 | LOC_Os09g39180 | Os09g0565200 | OsCRP1 | Detail |
| C2H9g06735 | 9:19,189,868-19,191,873 | - | C1H9g23294 | CX9g055878 | LOC_Os09g39190 | Os09g0565300 | - | Detail |
| C2H9g05243 | 9:19,193,569-19,195,287 | - | C1H9g02800 | CX9g055878 | LOC_Os09g39190 | Os09g0565350 | - | Detail |
| C2H9g29461 | 9:19,195,507-19,199,219 | - | C1H9g15519 | CX9g056354 | LOC_Os09g39200 | Os09g0565400 | - | Detail |
| C2H9g27919 | 9:19,201,190-19,217,268 | + | C1H9g26476 | CX9g057714 | - | Os09g0565500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |