| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g08742 | 1:37,878,810-37,879,475 | + | C2H1g00754 | CX1g003828 | LOC_Os01g73770 | Os01g0968800 | OsDREB1F | Detail |
| C1H1g28424 | 1:37,889,332-37,890,883 | - | C2H1g09238 | CX1g003644 | LOC_Os01g73780 | Os01g0969000 | - | Detail |
| C1H1g31794 | 1:37,891,446-37,894,977 | - | C2H1g20740 | CX1g006205 | LOC_Os01g73790 | Os01g0969100 | - | Detail |
| C1H1g01507 | 1:37,906,288-37,909,549 | + | C2H1g09544 | CX1g003584 | LOC_Os01g73880 | Os01g0970400 | - | Detail |
| C1H1g08350 | 1:37,911,627-37,912,946 | + | C2H1g13571 | CX1g002862 | LOC_Os01g73890 | Os01g0970500 | OsTFIIAgamma1, OsTFIIAγ1 | Detail |
| C1H1g18423 | 1:37,913,620-37,917,041 | - | C2H1g20677 | CX1g006271 | LOC_Os01g73900 | Os01g0970600 | OsRH58 | Detail |
| C1H1g08408 | 1:37,918,204-37,920,437 | - | C2H1g02029 | CX1g001477 | LOC_Os01g73910 | Os01g0970700 | - | Detail |
| C1H1g27707 | 1:37,921,319-37,926,355 | - | C2H1g20906 | CX1g000299 | LOC_Os01g73950 | Os01g0970900 | - | Detail |
| C1H1g29874 | 1:37,922,784-37,923,023 | + | - | CX1g001068 | LOC_Os01g73940 | Os01g0971000 | - | Detail |
| C1H1g24776 | 1:37,929,699-37,931,836 | + | C2H1g18524 | CX1g003601 | LOC_Os01g73960 | Os01g0971100 | OsDi19-5 | Detail |
| C1H1g21855 | 1:37,933,279-37,937,712 | - | C2H1g12108 | CX1g003985 | LOC_Os01g73970 | Os01g0971200 | - | Detail |
| C1H1g24112 | 1:37,940,102-37,941,882 | + | C2H1g29254 | CX1g001229 | LOC_Os01g73980 | Os01g0971400 | - | Detail |
| C1H1g16044 | 1:37,943,109-37,944,391 | + | C2H1g07849 | CX1g006897 | LOC_Os01g73990 | Os01g0971500 | - | Detail |
| C1H1g29294 | 1:37,947,500-37,948,726 | - | C2H1g06455 | CX1g006969 | LOC_Os01g74000 | Os01g0971600 | - | Detail |
| C1H1g07344 | 1:37,948,790-37,950,687 | - | C2H1g06455 | CX1g006969 | LOC_Os01g74000 | Os01g0971600 | - | Detail |
| C1H1g11998 | 1:37,951,933-37,957,466 | - | C2H1g14357 | CX1g003751 | LOC_Os01g74010 | Os01g0971700 | - | Detail |
| C1H1g09458 | 1:37,958,268-37,958,999 | - | C2H1g05837 | CX1g002155 | LOC_Os01g74020 | Os01g0971800 | OsPCL1, OsLUX | Detail |
| C1H1g15323 | 1:37,960,317-37,966,793 | - | C2H1g13899 | CX1g001256 | LOC_Os01g74030 | Os01g0971900 | - | Detail |
| C1H1g17657 | 1:37,967,965-37,971,177 | + | C2H1g06104 | CX1g000341 | LOC_Os01g74040 | Os01g0972000 | - | Detail |
| C1H1g23136 | 1:37,972,684-37,974,615 | - | C2H1g26306 | CX1g006301 | LOC_Os01g74110 | Os01g0972200 | OsZIP1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g07018 | 3:4,064,168-4,067,247 | - | C1H3g25212 | CX3g030934 | LOC_Os03g09020 | Os03g0189600 | - | Detail |
| C2H3g15705 | 3:4,076,995-4,077,741 | + | C1H3g17759 | CX3g030414 | LOC_Os03g09045 | Os03g0190000 | - | Detail |
| C2H3g04200 | 3:4,079,357-4,082,330 | - | C1H3g10345 | CX3g029542 | LOC_Os03g09060 | Os03g0190100 | - | Detail |
| C2H3g20959 | 3:4,084,964-4,088,393 | - | C1H3g09287 | CX3g031332 | LOC_Os03g09070 | Os03g0190300 | - | Detail |
| C2H3g15387 | 3:4,095,573-4,099,565 | - | C1H3g05709 | CX3g031087 | LOC_Os03g09080 | Os03g0190800 | - | Detail |
| C2H3g01761 | 3:4,101,326-4,104,401 | - | C1H3g10832 | CX3g028138 | LOC_Os03g09090 | Os03g0190900 | - | Detail |
| C2H3g07809 | 3:4,106,752-4,114,670 | - | C1H3g14873 | CX3g029059 | LOC_Os03g09100 | Os03g0191000 | SCT1 | Detail |
| C2H3g15678 | 3:4,117,966-4,121,511 | - | C1H3g14873 | CX3g025401 | LOC_Os03g09110 | Os03g0191100 | - | Detail |
| C2H3g21550 | 3:4,126,940-4,128,168 | - | C1H3g14671 | CX3g026471 | LOC_Os03g09120 | Os03g0191200 | - | Detail |
| C2H3g28466 | 3:4,139,871-4,142,219 | + | C1H3g14495 | CX3g028388 | LOC_Os03g09140 | Os03g0191400 | OsRab6B2, OsRab6a | Detail |
| C2H3g00905 | 3:4,144,938-4,148,814 | - | C1H3g25069 | CX3g027338 | LOC_Os03g09150 | Os03g0191700 | - | Detail |
| C2H3g19135 | 3:4,151,128-4,151,937 | + | C1H3g30469 | CX3g029377 | LOC_Os03g09160 | Os03g0191800 | - | Detail |
| C2H3g16037 | 3:4,157,728-4,158,624 | - | C1H3g18769 | CX3g028606 | LOC_Os03g09170 | Os03g0191900 | - | Detail |
| C2H3g14345 | 3:4,163,160-4,166,595 | - | C1H3g13867 | CX3g025223 | LOC_Os03g09180 | Os03g0192000 | - | Detail |
| C2H3g00220 | 3:4,167,033-4,169,737 | + | C1H3g13109 | CX3g026535 | LOC_Os03g09190 | Os03g0192100 | - | Detail |
| C2H3g04064 | 3:4,169,895-4,172,790 | - | C1H3g24183 | CX3g029681 | LOC_Os03g09200 | Os03g0192300 | - | Detail |
| C2H3g23777 | 3:4,183,683-4,186,314 | - | C1H3g22125 | CX3g026243 | LOC_Os03g09210 | Os03g0192400 | - | Detail |
| C2H3g14962 | 3:4,191,655-4,196,800 | + | C1H3g21423 | CX3g025389 | LOC_Os03g09220 | Os03g0192500 | PP45, OsPP45, BIPP2C1 | Detail |
| C2H3g01547 | 3:4,197,442-4,198,720 | - | C1H3g29007 | CX3g029005 | LOC_Os03g09230 | Os03g0192600 | - | Detail |
| C2H3g00630 | 3:4,201,731-4,206,113 | - | C1H3g26414 | CX3g028884 | LOC_Os03g09250 | Os03g0192700 | INO1, RINO1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |