| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g08742 | 1:37,878,810-37,879,475 | + | C2H1g00754 | CX1g003828 | LOC_Os01g73770 | Os01g0968800 | OsDREB1F | Detail |
| C1H1g28424 | 1:37,889,332-37,890,883 | - | C2H1g09238 | CX1g003644 | LOC_Os01g73780 | Os01g0969000 | - | Detail |
| C1H1g31794 | 1:37,891,446-37,894,977 | - | C2H1g20740 | CX1g006205 | LOC_Os01g73790 | Os01g0969100 | - | Detail |
| C1H1g01507 | 1:37,906,288-37,909,549 | + | C2H1g09544 | CX1g003584 | LOC_Os01g73880 | Os01g0970400 | - | Detail |
| C1H1g08350 | 1:37,911,627-37,912,946 | + | C2H1g13571 | CX1g002862 | LOC_Os01g73890 | Os01g0970500 | OsTFIIAgamma1, OsTFIIAγ1 | Detail |
| C1H1g18423 | 1:37,913,620-37,917,041 | - | C2H1g20677 | CX1g006271 | LOC_Os01g73900 | Os01g0970600 | OsRH58 | Detail |
| C1H1g08408 | 1:37,918,204-37,920,437 | - | C2H1g02029 | CX1g001477 | LOC_Os01g73910 | Os01g0970700 | - | Detail |
| C1H1g27707 | 1:37,921,319-37,926,355 | - | C2H1g20906 | CX1g000299 | LOC_Os01g73950 | Os01g0970900 | - | Detail |
| C1H1g29874 | 1:37,922,784-37,923,023 | + | - | CX1g001068 | LOC_Os01g73940 | Os01g0971000 | - | Detail |
| C1H1g24776 | 1:37,929,699-37,931,836 | + | C2H1g18524 | CX1g003601 | LOC_Os01g73960 | Os01g0971100 | OsDi19-5 | Detail |
| C1H1g21855 | 1:37,933,279-37,937,712 | - | C2H1g12108 | CX1g003985 | LOC_Os01g73970 | Os01g0971200 | - | Detail |
| C1H1g24112 | 1:37,940,102-37,941,882 | + | C2H1g29254 | CX1g001229 | LOC_Os01g73980 | Os01g0971400 | - | Detail |
| C1H1g16044 | 1:37,943,109-37,944,391 | + | C2H1g07849 | CX1g006897 | LOC_Os01g73990 | Os01g0971500 | - | Detail |
| C1H1g29294 | 1:37,947,500-37,948,726 | - | C2H1g06455 | CX1g006969 | LOC_Os01g74000 | Os01g0971600 | - | Detail |
| C1H1g07344 | 1:37,948,790-37,950,687 | - | C2H1g06455 | CX1g006969 | LOC_Os01g74000 | Os01g0971600 | - | Detail |
| C1H1g11998 | 1:37,951,933-37,957,466 | - | C2H1g14357 | CX1g003751 | LOC_Os01g74010 | Os01g0971700 | - | Detail |
| C1H1g09458 | 1:37,958,268-37,958,999 | - | C2H1g05837 | CX1g002155 | LOC_Os01g74020 | Os01g0971800 | OsPCL1, OsLUX | Detail |
| C1H1g15323 | 1:37,960,317-37,966,793 | - | C2H1g13899 | CX1g001256 | LOC_Os01g74030 | Os01g0971900 | - | Detail |
| C1H1g17657 | 1:37,967,965-37,971,177 | + | C2H1g06104 | CX1g000341 | LOC_Os01g74040 | Os01g0972000 | - | Detail |
| C1H1g23136 | 1:37,972,684-37,974,615 | - | C2H1g26306 | CX1g006301 | LOC_Os01g74110 | Os01g0972200 | OsZIP1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g18887 | 11:24,655,961-24,656,758 | + | C1H11g08785 | CX11g013001 | LOC_Os11g46250 | Os11g0689650 | - | Detail |
| C2H11g25769 | 11:24,662,732-24,665,443 | + | C1H11g17612 | CX11g012170 | LOC_Os11g46870 | Os11g0690332 | - | Detail |
| C2H11g00721 | 11:24,669,102-24,673,277 | + | C1H11g07012 | CX11g014828 | LOC_Os11g47130 | Os11g0693900 | - | Detail |
| C2H11g02366 | 11:24,686,964-24,690,080 | + | C1H11g10846 | CX11g012170 | LOC_Os11g46900 | Os11g0690332 | - | Detail |
| C2H11g19771 | 11:24,708,886-24,709,527 | + | C1H11g17612 | CX11g012170 | LOC_Os11g47140 | Os11g0694100 | - | Detail |
| C2H11g05901 | 11:24,713,833-24,716,751 | + | C1H11g10846 | CX11g012170 | LOC_Os11g47140 | Os11g0694100 | - | Detail |
| C2H11g12607 | 11:24,722,706-24,723,741 | + | C1H11g10846 | CX11g012170 | LOC_Os11g47150 | Os11g0691300 | Pb4 | Detail |
| C2H11g25513 | 11:24,725,011-24,725,885 | - | - | - | - | Os11g0691700 | - | Detail |
| C2H11g29556 | 11:24,725,128-24,726,476 | + | C1H11g01182 | CX11g013574 | LOC_Os11g46980 | Os11g0691800 | - | Detail |
| C2H11g15159 | 11:24,727,468-24,728,547 | + | C1H11g01182 | CX11g013565 | LOC_Os11g47170 | Os11g0694600 | Pi65 | Detail |
| C2H11g22044 | 11:24,728,295-24,730,213 | - | - | - | - | Os11g0694500 | - | Detail |
| C2H11g23375 | 11:24,729,983-24,733,387 | + | C1H11g20640 | CX11g013565 | LOC_Os11g47180 | Os11g0694600 | Pi65 | Detail |
| C2H11g07286 | 11:24,740,427-24,741,620 | + | C1H11g22057 | CX11g014502 | LOC_Os11g46980 | Os11g0694600 | Pi65 | Detail |
| C2H11g06668 | 11:24,741,819-24,743,864 | + | C1H11g20640 | CX11g012045 | LOC_Os11g47210 | Os11g0694850 | Xa26, Xa3, Xa3/Xa26 | Detail |
| C2H11g19602 | 11:24,748,797-24,752,221 | - | C1H11g19223 | CX11g013574 | LOC_Os11g47240 | Os11g0692500 | - | Detail |
| C2H11g25730 | 11:24,782,655-24,783,962 | - | C1H11g13616 | CX11g012045 | LOC_Os11g47310 | Os11g0695000 | - | Detail |
| C2H11g02264 | 11:24,793,327-24,796,947 | - | C1H11g25519 | CX11g013565 | LOC_Os11g47310 | Os11g0695800 | - | Detail |
| C2H11g06125 | 11:24,802,661-24,810,240 | - | C1H11g07012 | CX11g014828 | LOC_Os11g47320 | Os11g0693900 | - | Detail |
| C2H11g17622 | 11:24,811,330-24,817,299 | + | C1H11g12238 | CX11g013008 | LOC_Os11g47330 | Os11g0696200 | EDT1 | Detail |
| C2H11g29185 | 11:24,822,881-24,825,703 | + | C1H11g22878 | CX11g011040 | LOC_Os11g47350 | Os11g0696400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |