| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g08742 | 1:37,878,810-37,879,475 | + | C2H1g00754 | CX1g003828 | LOC_Os01g73770 | Os01g0968800 | OsDREB1F | Detail |
| C1H1g28424 | 1:37,889,332-37,890,883 | - | C2H1g09238 | CX1g003644 | LOC_Os01g73780 | Os01g0969000 | - | Detail |
| C1H1g31794 | 1:37,891,446-37,894,977 | - | C2H1g20740 | CX1g006205 | LOC_Os01g73790 | Os01g0969100 | - | Detail |
| C1H1g01507 | 1:37,906,288-37,909,549 | + | C2H1g09544 | CX1g003584 | LOC_Os01g73880 | Os01g0970400 | - | Detail |
| C1H1g08350 | 1:37,911,627-37,912,946 | + | C2H1g13571 | CX1g002862 | LOC_Os01g73890 | Os01g0970500 | OsTFIIAgamma1, OsTFIIAγ1 | Detail |
| C1H1g18423 | 1:37,913,620-37,917,041 | - | C2H1g20677 | CX1g006271 | LOC_Os01g73900 | Os01g0970600 | OsRH58 | Detail |
| C1H1g08408 | 1:37,918,204-37,920,437 | - | C2H1g02029 | CX1g001477 | LOC_Os01g73910 | Os01g0970700 | - | Detail |
| C1H1g27707 | 1:37,921,319-37,926,355 | - | C2H1g20906 | CX1g000299 | LOC_Os01g73950 | Os01g0970900 | - | Detail |
| C1H1g29874 | 1:37,922,784-37,923,023 | + | - | CX1g001068 | LOC_Os01g73940 | Os01g0971000 | - | Detail |
| C1H1g24776 | 1:37,929,699-37,931,836 | + | C2H1g18524 | CX1g003601 | LOC_Os01g73960 | Os01g0971100 | OsDi19-5 | Detail |
| C1H1g21855 | 1:37,933,279-37,937,712 | - | C2H1g12108 | CX1g003985 | LOC_Os01g73970 | Os01g0971200 | - | Detail |
| C1H1g24112 | 1:37,940,102-37,941,882 | + | C2H1g29254 | CX1g001229 | LOC_Os01g73980 | Os01g0971400 | - | Detail |
| C1H1g16044 | 1:37,943,109-37,944,391 | + | C2H1g07849 | CX1g006897 | LOC_Os01g73990 | Os01g0971500 | - | Detail |
| C1H1g29294 | 1:37,947,500-37,948,726 | - | C2H1g06455 | CX1g006969 | LOC_Os01g74000 | Os01g0971600 | - | Detail |
| C1H1g07344 | 1:37,948,790-37,950,687 | - | C2H1g06455 | CX1g006969 | LOC_Os01g74000 | Os01g0971600 | - | Detail |
| C1H1g11998 | 1:37,951,933-37,957,466 | - | C2H1g14357 | CX1g003751 | LOC_Os01g74010 | Os01g0971700 | - | Detail |
| C1H1g09458 | 1:37,958,268-37,958,999 | - | C2H1g05837 | CX1g002155 | LOC_Os01g74020 | Os01g0971800 | OsPCL1, OsLUX | Detail |
| C1H1g15323 | 1:37,960,317-37,966,793 | - | C2H1g13899 | CX1g001256 | LOC_Os01g74030 | Os01g0971900 | - | Detail |
| C1H1g17657 | 1:37,967,965-37,971,177 | + | C2H1g06104 | CX1g000341 | LOC_Os01g74040 | Os01g0972000 | - | Detail |
| C1H1g23136 | 1:37,972,684-37,974,615 | - | C2H1g26306 | CX1g006301 | LOC_Os01g74110 | Os01g0972200 | OsZIP1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g16916 | 5:21,941,751-21,943,169 | - | C1H5g02470 | CX5g040432 | LOC_Os05g45110 | Os05g0527100 | LTG5 | Detail |
| C2H5g26267 | 5:21,946,541-21,947,998 | - | C1H5g26656 | CX5g040432 | LOC_Os05g45140 | Os05g0527200 | - | Detail |
| C2H5g18262 | 5:21,952,884-21,954,030 | - | C1H5g16988 | CX5g040432 | LOC_Os05g45120 | Os05g0527600 | - | Detail |
| C2H5g26863 | 5:21,954,082-21,954,345 | - | C1H5g16988 | CX5g040432 | LOC_Os05g45170 | Os05g0527700 | - | Detail |
| C2H5g14340 | 5:21,957,532-21,957,918 | - | C1H5g19598 | CX5g040432 | LOC_Os05g45180 | Os05g0527800 | - | Detail |
| C2H5g08285 | 5:21,963,954-21,965,354 | - | C1H5g26785 | CX5g040432 | LOC_Os05g45200 | Os05g0527900 | - | Detail |
| C2H5g01814 | 5:21,965,778-21,974,249 | - | C1H5g24507 | CX5g038665 | LOC_Os05g45210 | Os05g0528000 | OsRBOH5 | Detail |
| C2H5g28345 | 5:21,978,076-21,978,713 | - | C1H5g28587 | CX5g037204 | LOC_Os05g45220 | Os05g0528200 | - | Detail |
| C2H5g25633 | 5:21,981,854-21,982,060 | - | C1H5g01096 | CX5g037082 | LOC_Os05g49210 | Os05g0583000 | - | Detail |
| C2H5g03986 | 5:21,985,770-21,986,480 | - | C1H5g01594 | CX5g039623 | LOC_Os05g45230 | Os05g0528500 | - | Detail |
| C2H5g20737 | 5:21,989,857-21,992,475 | - | C1H5g08207 | CX5g040089 | LOC_Os05g45240 | Os05g0528600 | YUCCA2, OsYUCCA2, OsYUC2 | Detail |
| C2H5g24380 | 5:22,004,753-22,007,223 | + | C1H5g01627 | CX5g037129 | LOC_Os05g45270 | Os05g0528900 | - | Detail |
| C2H5g24809 | 5:22,008,029-22,011,095 | - | C1H5g10151 | CX5g037006 | LOC_Os05g45280 | Os05g0529000 | OsCOLE1 | Detail |
| C2H5g17684 | 5:22,014,304-22,015,032 | - | C1H5g28513 | CX5g037310 | LOC_Os05g45300 | Os05g0529200 | - | Detail |
| C2H5g19780 | 5:22,018,144-22,018,601 | - | C1H5g24048 | CX5g038523 | LOC_Os05g45310 | Os05g0529300 | - | Detail |
| C2H5g25402 | 5:22,019,259-22,021,190 | + | C1H5g11025 | CX5g039119 | LOC_Os05g45320 | Os05g0529400 | - | Detail |
| C2H5g16121 | 5:22,029,592-22,035,048 | + | C1H5g31384 | CX5g036791 | LOC_Os05g45340 | Os05g0529600 | - | Detail |
| C2H5g16704 | 5:22,041,383-22,044,184 | - | C1H5g03075 | CX5g038291 | LOC_Os05g45350 | Os05g0529700 | - | Detail |
| C2H5g05411 | 5:22,047,422-22,050,628 | - | C1H5g03402 | CX5g039702 | LOC_Os05g45370 | Os05g0529900 | - | Detail |
| C2H5g30642 | 5:22,055,667-22,059,206 | - | C1H5g16768 | CX5g038212 | LOC_Os05g45400 | Os05g0530300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |