| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g13950 | 1:37,434,699-37,436,080 | + | - | - | - | - | - | Detail |
| C1H1g07051 | 1:37,438,217-37,440,268 | + | C2H1g22102 | CX1g003252 | LOC_Os01g72740 | Os01g0957600 | - | Detail |
| C1H1g25546 | 1:37,443,660-37,445,638 | + | C2H1g10277 | CX1g003252 | LOC_Os01g72760 | Os01g0957800 | - | Detail |
| C1H1g22585 | 1:37,448,654-37,461,342 | + | C2H1g17125 | CX1g005071 | LOC_Os01g72780 | Os01g0957900 | - | Detail |
| C1H1g03012 | 1:37,462,725-37,465,818 | + | C2H1g30473 | CX1g004960 | LOC_Os01g72790 | Os01g0958000 | - | Detail |
| C1H1g15701 | 1:37,467,896-37,470,497 | - | C2H1g28809 | CX1g006015 | LOC_Os01g72800 | Os01g0958100 | - | Detail |
| C1H1g27805 | 1:37,471,569-37,472,951 | + | C2H1g20125 | CX1g003169 | LOC_Os01g72810 | Os01g0958200 | - | Detail |
| C1H1g12147 | 1:37,474,600-37,477,549 | + | C2H1g09202 | CX1g003953 | LOC_Os01g72820 | Os01g0958400 | - | Detail |
| C1H1g06601 | 1:37,481,107-37,488,339 | + | C2H1g09260 | CX1g003931 | LOC_Os01g72834 | Os01g0958500 | - | Detail |
| C1H1g17341 | 1:37,488,726-37,489,229 | - | C2H1g11916 | CX1g002191 | LOC_Os01g72850 | Os01g0748500 | - | Detail |
| C1H1g20872 | 1:37,493,826-37,498,363 | + | C2H1g16622 | CX1g001374 | LOC_Os01g72860 | Os01g0958700 | - | Detail |
| C1H1g13353 | 1:37,498,533-37,502,081 | - | C2H1g17179 | CX1g003826 | LOC_Os01g72870 | Os01g0958800 | - | Detail |
| C1H1g19836 | 1:37,502,297-37,513,934 | + | C2H1g23082 | CX1g002997 | LOC_Os01g72880 | Os01g0958900 | - | Detail |
| C1H1g10020 | 1:37,512,663-37,513,729 | - | - | - | - | Os01g0959050 | - | Detail |
| C1H1g01576 | 1:37,514,811-37,515,232 | - | C2H1g03600 | CX1g005210 | LOC_Os01g72900 | Os01g0959100 | - | Detail |
| C1H1g25395 | 1:37,516,211-37,516,669 | + | C2H1g25163 | CX1g001673 | LOC_Os01g72910 | Os01g0959200 | OsASR1 | Detail |
| C1H1g10801 | 1:37,517,504-37,522,595 | + | C2H1g14114 | CX1g003457 | LOC_Os12g32130 | Os01g0749400 | - | Detail |
| C1H1g17990 | 1:37,530,982-37,533,527 | + | C2H1g09318 | CX1g000366 | LOC_Os01g72930 | Os01g0959600 | - | Detail |
| C1H1g16021 | 1:37,537,421-37,545,202 | - | C2H1g08421 | CX1g006226 | LOC_Os01g72940 | Os01g0959800 | - | Detail |
| C1H1g05317 | 1:37,546,318-37,547,351 | + | C2H1g02502 | CX1g001487 | LOC_Os01g72950 | Os01g0959900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g22765 | 2:28,236,918-28,237,175 | - | C1H2g07594 | CX2g023200 | - | Os02g0736700 | - | Detail |
| C2H2g11611 | 2:28,240,281-28,240,817 | - | - | CX2g022254 | - | Os02g0736900 | - | Detail |
| C2H2g25731 | 2:28,245,225-28,245,455 | + | - | - | LOC_Os02g50400 | Os02g0737300 | - | Detail |
| C2H2g21919 | 2:28,251,181-28,251,420 | + | C1H2g14249 | - | LOC_Os02g50450 | Os02g0738100 | - | Detail |
| C2H2g10969 | 2:28,257,712-28,259,079 | - | C1H2g14103 | CX2g023707 | LOC_Os02g50460 | Os02g0738200 | - | Detail |
| C2H2g16308 | 2:28,277,648-28,283,562 | + | C1H2g00500 | CX2g021204 | LOC_Os02g50480 | Os02g0738400 | OHK5, OHK5, Ohk5, OsHK1, OsHK6, HK, Crl1a | Detail |
| C2H2g12754 | 2:28,294,300-28,298,676 | + | C1H2g09387 | CX2g020936 | LOC_Os02g50490 | Os02g0738600 | - | Detail |
| C2H2g25440 | 2:28,300,139-28,310,024 | - | C1H2g28406 | CX2g022539 | LOC_Os02g50550 | Os02g0738900 | BC3, bc3, bc-3, OsDRP2B, DRP2B | Detail |
| C2H2g10338 | 2:28,311,660-28,320,928 | + | C1H2g06055 | CX2g024755 | LOC_Os02g50560 | Os02g0739000 | - | Detail |
| C2H2g19070 | 2:28,320,855-28,325,288 | - | C1H2g22155 | CX2g024527 | LOC_Os02g50570 | Os02g0739100 | - | Detail |
| C2H2g12798 | 2:28,334,593-28,335,726 | - | C1H2g26267 | CX2g023617 | LOC_Os02g50600 | Os02g0739400 | - | Detail |
| C2H2g13279 | 2:28,345,355-28,349,094 | - | C1H2g19740 | CX2g023255 | LOC_Os02g50620 | Os02g0739600 | - | Detail |
| C2H2g20599 | 2:28,350,795-28,353,624 | - | C1H2g02446 | CX2g021394 | LOC_Os02g50630 | Os02g0739700 | OsE2Fe-1 | Detail |
| C2H2g22496 | 2:28,356,473-28,360,636 | - | C1H2g01602 | CX2g023514 | LOC_Os02g50640 | Os02g0739900 | - | Detail |
| C2H2g07910 | 2:28,375,801-28,381,895 | - | C1H2g14498 | CX2g021304 | LOC_Os02g50680 | Os02g0740300 | - | Detail |
| C2H2g25866 | 2:28,382,669-28,384,104 | - | C1H2g26149 | CX2g024066 | LOC_Os02g50690 | Os02g0740400 | - | Detail |
| C2H2g26692 | 2:28,387,924-28,388,874 | + | C1H2g27425 | CX2g023069 | LOC_Os02g50700 | Os02g0740500 | - | Detail |
| C2H2g23006 | 2:28,390,599-28,390,880 | - | C1H2g04140 | CX2g024544 | LOC_Os02g50710 | Os02g0740600 | - | Detail |
| C2H2g13251 | 2:28,392,972-28,393,480 | + | - | - | - | - | - | Detail |
| C2H2g10045 | 2:28,393,015-28,394,133 | - | - | CX2g019920 | LOC_Os02g50730 | Os02g0740700 | OsMMP1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |