| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g30367 | 1:37,117,906-37,120,719 | + | C2H3g08891 | CX1g001289 | - | - | - | Detail |
| C1H1g13183 | 1:37,121,582-37,122,052 | - | C2H1g09890 | CX1g000649 | LOC_Os01g72205 | Os01g0950866 | - | Detail |
| C1H1g26489 | 1:37,121,617-37,127,831 | + | C2H1g20439 | CX1g006637 | LOC_Os01g72210 | Os01g0950900 | - | Detail |
| C1H1g26405 | 1:37,126,345-37,133,241 | - | C2H1g27207 | CX1g001273 | LOC_Os01g72220 | Os01g0951000 | OsFY | Detail |
| C1H1g21234 | 1:37,135,362-37,138,578 | + | C2H1g23592 | CX1g004320 | LOC_Os01g72230 | Os01g0951100 | - | Detail |
| C1H1g03325 | 1:37,139,935-37,147,511 | + | C2H1g09816 | CX1g004161 | LOC_Os01g72240 | Os01g0951200 | - | Detail |
| C1H1g25508 | 1:37,148,245-37,149,867 | - | C2H1g26033 | CX1g005013 | LOC_Os01g72260 | Os01g0951500 | CYP94E2, OsCYP94E2 | Detail |
| C1H1g24604 | 1:37,155,802-37,158,937 | - | C2H1g09971 | CX1g006323 | LOC_Os01g72280 | Os01g0951800 | - | Detail |
| C1H1g13711 | 1:37,165,847-37,167,114 | + | C2H1g11533 | CX1g003867 | LOC_Os01g72290 | Os01g0952000 | - | Detail |
| C1H1g12927 | 1:37,172,409-37,173,548 | + | C2H1g04145 | CX1g000435 | LOC_Os01g72300 | Os01g0952100 | - | Detail |
| C1H1g25821 | 1:37,174,340-37,179,867 | + | C2H1g17493 | CX1g001457 | LOC_Os01g72310 | Os01g0952200 | - | Detail |
| C1H1g12568 | 1:37,180,233-37,187,553 | - | C2H1g24796 | CX1g004562 | LOC_Os01g72320 | Os01g0952300 | - | Detail |
| C1H1g26383 | 1:37,204,253-37,206,559 | + | C2H1g17242 | CX1g002915 | LOC_Os01g72330 | Os01g0952500 | RR4, rr4, OsRR4, Rra3, OsRRA3 | Detail |
| C1H1g28344 | 1:37,209,200-37,217,312 | + | C2H1g15970 | CX1g006787 | LOC_Os01g72340 | Os01g0952600 | - | Detail |
| C1H1g14812 | 1:37,220,453-37,226,469 | + | C2H1g26616 | CX1g000308 | LOC_Os01g72350 | Os01g0952700 | - | Detail |
| C1H1g24549 | 1:37,228,408-37,229,073 | + | - | CX1g004115 | LOC_Os01g72360 | Os01g0952900 | - | Detail |
| C1H1g10733 | 1:37,230,068-37,233,918 | - | C2H1g27034 | CX1g006331 | LOC_Os01g72370 | Os01g0952800 | - | Detail |
| C1H1g18549 | 1:37,237,551-37,239,692 | + | C2H1g16159 | CX1g002462 | LOC_Os01g72380 | Os01g0953100 | - | Detail |
| C1H1g01146 | 1:37,241,007-37,242,509 | - | C2H1g14926 | CX1g001591 | LOC_Os01g72420 | Os01g0953500 | - | Detail |
| C1H1g04628 | 1:37,247,452-37,249,749 | - | C2H1g03834 | CX1g003263 | LOC_Os01g72430 | Os01g0953600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g02997 | 1:12,233,616-12,239,615 | + | C1H1g02190 | CX1g000047 | LOC_Os01g24680 | Os01g0348600 | - | Detail |
| C2H1g13094 | 1:12,242,301-12,243,912 | + | C1H1g22060 | CX1g006528 | LOC_Os01g24690 | Os01g0348700 | - | Detail |
| C2H1g24178 | 1:12,246,421-12,246,663 | - | C1H1g28108 | CX1g002294 | LOC_Os01g25280 | Os01g0348800 | - | Detail |
| C2H1g30396 | 1:12,253,254-12,253,788 | - | C1H1g00208 | CX1g002294 | LOC_Os01g24710 | Os01g0348900 | OsJRL, OsMBL1, OsSalt | Detail |
| C2H1g24096 | 1:12,270,705-12,275,657 | - | C1H1g16274 | CX1g004857 | LOC_Os01g24750 | Os01g0349400 | - | Detail |
| C2H1g13316 | 1:12,289,183-12,292,326 | + | C1H1g27046 | CX1g000662 | LOC_Os01g24780 | Os01g0349800 | - | Detail |
| C2H1g08931 | 1:12,438,143-12,442,353 | - | C1H1g11336 | CX1g001694 | LOC_Os01g24820 | Os01g0350300 | - | Detail |
| C2H1g21333 | 1:12,460,738-12,468,533 | + | C1H1g00555 | CX1g002860 | LOC_Os01g24880 | Os01g0350900 | IPI1 | Detail |
| C2H1g14607 | 1:12,476,204-12,482,396 | + | C1H1g05982 | CX1g005272 | LOC_Os01g24940 | Os01g0351100 | - | Detail |
| C2H1g09806 | 1:12,493,810-12,500,200 | + | C1H1g06101 | CX1g000433 | LOC_Os01g24940 | Os01g0351200 | - | Detail |
| C2H1g18699 | 1:12,517,727-12,518,452 | - | C1H1g24498 | CX1g006080 | LOC_Os01g24960 | Os01g0351500 | - | Detail |
| C2H1g23303 | 1:12,524,550-12,527,499 | + | C1H1g12342 | CX1g002020 | LOC_Os01g24980 | Os01g0351800 | - | Detail |
| C2H1g18138 | 1:12,531,480-12,534,702 | + | C1H1g19518 | CX1g002475 | LOC_Os01g25010 | Os01g0352100 | - | Detail |
| C2H1g07713 | 1:12,560,452-12,560,833 | + | C1H1g19827 | CX1g006850 | - | - | - | Detail |
| C2H1g05879 | 1:12,560,881-12,563,018 | + | C1H1g05990 | CX1g006850 | - | Os01g0750100 | WRKY13, OsWRKY13 | Detail |
| C2H1g07698 | 1:12,589,870-12,590,804 | + | C1H1g16000 | CX1g003259 | LOC_Os01g25100 | Os01g0353400 | OsGST4 | Detail |
| C2H1g26082 | 1:12,595,884-12,598,643 | + | C1H1g26956 | CX1g006645 | LOC_Os01g25110 | Os01g0353600 | - | Detail |
| C2H1g07502 | 1:12,600,023-12,601,880 | + | - | - | - | - | - | Detail |
| C2H1g18726 | 1:12,605,357-12,605,733 | + | - | - | - | - | - | Detail |
| C2H1g28232 | 1:12,643,628-12,644,232 | - | C1H1g21653 | CX1g000417 | LOC_Os01g25160 | Os01g0348900 | OsJRL, OsMBL1, OsSalt | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |