| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g16335 | 1:36,969,708-36,972,923 | + | C2H1g26876 | CX1g003320 | LOC_Os01g71380 | Os01g0946700 | OsGLN1 | Detail |
| C1H1g28153 | 1:36,975,055-36,982,346 | + | C2H1g25982 | CX1g005350 | LOC_Os01g71960 | Os01g0948100 | OsMus81, OsMus81beta, OsMus81β | Detail |
| C1H1g11535 | 1:36,995,688-36,997,016 | + | C2H1g13478 | CX1g002069 | LOC_Os01g71970 | Os01g0948200 | OsDLA | Detail |
| C1H1g04988 | 1:36,999,122-37,001,615 | + | C2H1g24573 | CX1g003090 | LOC_Os01g71980 | Os01g0948300 | - | Detail |
| C1H1g12107 | 1:37,001,585-37,004,649 | - | C2H1g07613 | CX1g004443 | LOC_Os01g71990 | Os01g0948400 | OsP5CR | Detail |
| C1H1g04245 | 1:37,005,232-37,009,159 | - | C2H1g30437 | CX1g001292 | LOC_Os01g72000 | Os01g0948500 | - | Detail |
| C1H1g24544 | 1:37,024,281-37,027,744 | - | C2H1g07385 | CX1g006785 | LOC_Os01g72020 | Os01g0948900 | OsBOP1, NH4 | Detail |
| C1H1g23618 | 1:37,063,151-37,067,802 | - | C2H1g13462 | CX1g002411 | LOC_Os01g72049 | Os01g0949060 | - | Detail |
| C1H1g17659 | 1:37,075,795-37,076,391 | + | C2H1g16329 | CX1g003732 | LOC_Os01g72080 | Os01g0949300 | - | Detail |
| C1H1g24211 | 1:37,079,793-37,082,622 | - | C2H1g17329 | CX1g003977 | LOC_Os01g72090 | Os01g0949400 | - | Detail |
| C1H1g05070 | 1:37,083,927-37,084,484 | - | C2H1g08758 | CX1g004333 | LOC_Os01g72100 | Os01g0949500 | - | Detail |
| C1H1g07252 | 1:37,094,149-37,095,200 | + | C2H1g28530 | CX1g001038 | LOC_Os01g72120 | Os01g0949700 | - | Detail |
| C1H1g22384 | 1:37,095,717-37,096,507 | + | C2H1g18539 | CX1g001038 | LOC_Os01g72130 | Os01g0949750 | - | Detail |
| C1H1g30242 | 1:37,098,253-37,099,383 | + | C2H1g25830 | CX1g001038 | LOC_Os01g72140 | Os01g0949800 | - | Detail |
| C1H1g00771 | 1:37,100,645-37,101,455 | + | C2H1g25821 | CX1g001038 | LOC_Os01g72150 | Os01g0949800 | - | Detail |
| C1H1g09413 | 1:37,101,931-37,102,733 | + | C2H1g04599 | CX1g001038 | LOC_Os01g72160 | Os01g0950000 | - | Detail |
| C1H1g16006 | 1:37,105,115-37,105,828 | + | C2H1g22758 | CX1g001038 | LOC_Os01g72170 | Os01g0950000 | - | Detail |
| C1H1g15694 | 1:37,110,283-37,111,721 | + | C2H1g19803 | CX1g001087 | LOC_Os01g72190 | - | - | Detail |
| C1H1g31521 | 1:37,113,544-37,114,611 | - | - | CX1g004052 | LOC_Os01g72200 | Os01g0950800 | - | Detail |
| C1H1g27599 | 1:37,115,935-37,117,015 | - | C2H1g09890 | CX1g000649 | LOC_Os01g72205 | Os01g0950866 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g16346 | 8:20,748,497-20,752,426 | + | C1H8g28296 | CX8g053708 | LOC_Os08g38790 | Os08g0496600 | - | Detail |
| C2H8g10386 | 8:20,757,680-20,759,017 | + | C1H8g12765 | - | LOC_Os08g38760 | Os08g0496400 | - | Detail |
| C2H8g22923 | 8:20,762,121-20,762,729 | + | C1H8g01878 | CX8g054242 | LOC_Os08g38780 | Os08g0496500 | OsHAP5D, OsNF-YC6 | Detail |
| C2H8g11976 | 8:20,765,261-20,766,019 | - | C1H8g28296 | CX8g053708 | LOC_Os08g38790 | Os08g0496600 | - | Detail |
| C2H8g11301 | 8:20,769,345-20,769,977 | + | C1H8g28869 | CX8g053550 | LOC_Os08g38800 | Os08g0499400 | - | Detail |
| C2H8g13569 | 8:20,774,346-20,775,780 | + | C1H8g25170 | CX8g051082 | LOC_Os08g38810 | Os08g0496800 | RAFTIN1 | Detail |
| C2H8g20951 | 8:20,776,076-20,779,421 | - | C1H8g01808 | CX8g052750 | LOC_Os08g38820 | Os08g0496900 | - | Detail |
| C2H8g14353 | 8:20,798,901-20,803,720 | + | C1H8g15634 | CX8g052210 | LOC_Os08g38850 | Os08g0497300 | - | Detail |
| C2H8g15790 | 8:20,814,340-20,817,796 | + | C1H8g05614 | CX8g054370 | LOC_Os08g38880 | Os08g0497600 | SRWD1, SRWD1, OsWD40-162 | Detail |
| C2H8g21269 | 8:20,819,680-20,822,016 | - | C1H8g11509 | CX8g051176 | LOC_Os08g38890 | Os08g0497900 | - | Detail |
| C2H8g28465 | 8:20,825,501-20,826,955 | - | C1H8g04045 | CX8g054486 | LOC_Os08g38920 | Os08g0498100 | ROMT-15 | Detail |
| C2H8g20074 | 8:20,834,002-20,838,066 | - | C1H8g11377 | CX8g050446 | LOC_Os08g38910 | Os08g0498400 | - | Detail |
| C2H8g26195 | 8:20,838,470-20,839,402 | - | C1H8g30587 | CX8g054028 | LOC_Os08g38920 | Os08g0498600 | - | Detail |
| C2H8g00191 | 8:20,847,785-20,848,768 | - | - | CX8g051450 | LOC_Os08g38960 | Os08g0499000 | - | Detail |
| C2H8g19174 | 8:20,857,996-20,863,195 | + | - | - | - | - | - | Detail |
| C2H8g12713 | 8:20,865,315-20,870,307 | + | C1H8g09708 | CX8g054703 | LOC_Os08g38980 | Os08g0499200 | - | Detail |
| C2H8g27487 | 8:20,871,185-20,873,918 | - | C1H8g02579 | CX8g051331 | LOC_Os08g38990 | Os08g0499300 | - | Detail |
| C2H8g24409 | 8:20,885,737-20,886,882 | + | C1H8g24576 | CX8g053550 | LOC_Os08g39000 | Os08g0499400 | - | Detail |
| C2H8g30618 | 8:20,892,854-20,894,185 | + | C1H8g21923 | CX8g053491 | LOC_Os08g39050 | Os08g0499800 | - | Detail |
| C2H8g09429 | 8:20,897,496-20,900,249 | + | C1H8g19746 | CX8g054078 | LOC_Os08g39060 | Os08g0499900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |