| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g07210 | 1:36,701,248-36,706,802 | + | C2H1g00426 | CX1g000756 | LOC_Os01g71200 | Os01g0938200 | - | Detail |
| C1H1g13834 | 1:36,709,163-36,710,152 | - | - | CX1g000266 | LOC_Os01g71210 | Os01g0938400 | - | Detail |
| C1H1g26126 | 1:36,712,091-36,717,052 | - | C2H1g14108 | CX1g004308 | LOC_Os01g71220 | Os01g0938600 | - | Detail |
| C1H1g10097 | 1:36,721,952-36,724,804 | + | C2H1g29372 | CX1g004180 | LOC_Os01g71230 | Os01g0938900 | - | Detail |
| C1H1g13399 | 1:36,728,801-36,729,172 | + | C2H1g06212 | CX1g005905 | - | Os01g0939000 | - | Detail |
| C1H1g17991 | 1:36,730,047-36,736,200 | + | C2H1g03097 | CX1g004665 | LOC_Os01g71240 | Os01g0939100 | - | Detail |
| C1H1g18399 | 1:36,736,922-36,738,715 | - | C2H1g07622 | CX1g005484 | LOC_Os01g71250 | Os01g0939200 | - | Detail |
| C1H1g15855 | 1:36,739,998-36,743,046 | - | C2H1g16653 | CX1g002440 | LOC_Os01g71256 | Os01g0939300 | - | Detail |
| C1H1g14395 | 1:36,745,046-36,748,212 | - | C2H1g17831 | CX1g005035 | LOC_Os01g71262 | Os01g0939400 | - | Detail |
| C1H1g17803 | 1:36,750,934-36,752,148 | + | C2H7g09412 | CX1g001018 | LOC_Os01g71270 | Os01g0939500 | - | Detail |
| C1H1g19591 | 1:36,754,537-36,758,865 | + | C2H1g21755 | CX1g007004 | LOC_Os01g71280 | Os01g0939600 | - | Detail |
| C1H1g21264 | 1:36,760,002-36,773,868 | + | C2H1g29286 | - | LOC_Os01g71300 | Os01g0939700 | - | Detail |
| C1H1g12592 | 1:36,774,143-36,779,177 | + | C2H1g28290 | - | LOC_Os01g71300 | Os01g0939700 | - | Detail |
| C1H1g26080 | 1:36,811,858-36,814,634 | + | C2H1g22141 | CX1g000893 | LOC_Os01g71310 | Os01g0940000 | CKX4, OsCKX4, ckx4, OsSCRM, OsSCRM2, SCRM, SCRM2 | Detail |
| C1H1g08967 | 1:36,817,457-36,823,509 | - | C2H1g01876 | CX1g004002 | LOC_Os01g71320 | Os01g0940100 | - | Detail |
| C1H1g04585 | 1:36,844,904-36,845,442 | + | C2H1g06863 | CX1g006883 | LOC_Os01g71330 | Os01g0940600 | - | Detail |
| C1H1g16091 | 1:36,848,582-36,850,305 | + | C2H1g01858 | CX1g000254 | LOC_Os01g71340 | Os01g0940700 | - | Detail |
| C1H1g10602 | 1:36,851,597-36,852,899 | + | C2H1g03308 | CX1g000254 | LOC_Os01g71350 | Os01g0940800 | Gns6 | Detail |
| C1H1g11005 | 1:36,857,741-36,858,706 | + | C2H1g25094 | CX1g000254 | LOC_Os01g71860 | Os01g0947000 | - | Detail |
| C1H1g17272 | 1:36,866,819-36,867,937 | + | C2H1g16744 | CX1g000254 | LOC_Os01g71410 | Os01g0941500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g24662 | 4:30,367,835-30,368,107 | - | C1H4g08597 | CX4g036614 | LOC_Os04g58940 | Os04g0686100 | - | Detail |
| C2H4g20786 | 4:30,372,186-30,379,514 | - | C1H4g06869 | CX4g033434 | LOC_Os04g58960 | Os04g0686200 | OsRLR4 | Detail |
| C2H4g06556 | 4:30,388,698-30,390,451 | - | C1H4g27993 | CX4g033160 | LOC_Os04g58980 | Os04g0686300 | - | Detail |
| C2H4g09974 | 4:30,391,221-30,395,140 | - | C1H4g20559 | CX4g034151 | LOC_Os04g58990 | Os04g0686500 | - | Detail |
| C2H4g02812 | 4:30,395,867-30,402,331 | - | C1H4g22211 | CX4g032982 | LOC_Os04g59000 | Os04g0686650 | - | Detail |
| C2H4g14334 | 4:30,411,446-30,412,687 | - | - | CX4g032332 | LOC_Os04g59010 | Os04g0686700 | - | Detail |
| C2H4g23629 | 4:30,417,623-30,418,249 | + | - | CX4g035004 | LOC_Os04g59020 | Os04g0686800 | OsVTL5 | Detail |
| C2H4g05730 | 4:30,423,735-30,427,457 | - | C1H4g16557 | CX4g033455 | LOC_Os04g59040 | Os04g0687100 | - | Detail |
| C2H4g24423 | 4:30,436,413-30,437,110 | + | C1H4g25779 | CX4g031409 | LOC_Os04g59050 | Os04g0687200 | - | Detail |
| C2H4g17341 | 4:30,438,345-30,441,545 | - | C1H4g30754 | CX4g033457 | LOC_Os04g59060 | Os04g0687300 | OsDjC46 | Detail |
| C2H4g17357 | 4:30,450,174-30,453,017 | + | C1H4g02340 | CX4g032584 | LOC_Os04g59120 | Os04g0687800 | - | Detail |
| C2H4g08207 | 4:30,458,707-30,462,673 | + | C1H4g28490 | CX4g034877 | LOC_Os04g59130 | Os04g0687900 | - | Detail |
| C2H4g18008 | 4:30,465,310-30,466,578 | + | - | CX4g032282 | LOC_Os04g59140 | Os04g0688000 | - | Detail |
| C2H4g15410 | 4:30,470,804-30,472,082 | - | C1H4g10712 | CX4g033823 | LOC_Os04g59150 | Os04g0688100 | - | Detail |
| C2H4g21064 | 4:30,476,422-30,477,629 | - | C1H4g16364 | CX4g033823 | LOC_Os04g59160 | Os04g0688200 | - | Detail |
| C2H4g21084 | 4:30,480,100-30,481,287 | - | C1H4g06961 | CX4g033823 | LOC_Os04g59190 | Os04g0688300 | - | Detail |
| C2H4g27045 | 4:30,485,275-30,486,722 | - | C1H4g31633 | CX4g033823 | LOC_Os04g59200 | Os04g0688500 | - | Detail |
| C2H4g21882 | 4:30,493,050-30,494,150 | - | C1H4g24789 | CX4g033823 | LOC_Os04g59210 | Os04g0688600 | - | Detail |
| C2H4g02467 | 4:30,497,343-30,498,439 | - | C1H4g27691 | CX4g033823 | LOC_Os04g59260 | Os04g0689000 | - | Detail |
| C2H4g27148 | 4:30,504,008-30,506,893 | - | C1H4g07402 | CX4g032771 | LOC_Os04g59310 | Os04g0689300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |