| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g07210 | 1:36,701,248-36,706,802 | + | C2H1g00426 | CX1g000756 | LOC_Os01g71200 | Os01g0938200 | - | Detail |
| C1H1g13834 | 1:36,709,163-36,710,152 | - | - | CX1g000266 | LOC_Os01g71210 | Os01g0938400 | - | Detail |
| C1H1g26126 | 1:36,712,091-36,717,052 | - | C2H1g14108 | CX1g004308 | LOC_Os01g71220 | Os01g0938600 | - | Detail |
| C1H1g10097 | 1:36,721,952-36,724,804 | + | C2H1g29372 | CX1g004180 | LOC_Os01g71230 | Os01g0938900 | - | Detail |
| C1H1g13399 | 1:36,728,801-36,729,172 | + | C2H1g06212 | CX1g005905 | - | Os01g0939000 | - | Detail |
| C1H1g17991 | 1:36,730,047-36,736,200 | + | C2H1g03097 | CX1g004665 | LOC_Os01g71240 | Os01g0939100 | - | Detail |
| C1H1g18399 | 1:36,736,922-36,738,715 | - | C2H1g07622 | CX1g005484 | LOC_Os01g71250 | Os01g0939200 | - | Detail |
| C1H1g15855 | 1:36,739,998-36,743,046 | - | C2H1g16653 | CX1g002440 | LOC_Os01g71256 | Os01g0939300 | - | Detail |
| C1H1g14395 | 1:36,745,046-36,748,212 | - | C2H1g17831 | CX1g005035 | LOC_Os01g71262 | Os01g0939400 | - | Detail |
| C1H1g17803 | 1:36,750,934-36,752,148 | + | C2H7g09412 | CX1g001018 | LOC_Os01g71270 | Os01g0939500 | - | Detail |
| C1H1g19591 | 1:36,754,537-36,758,865 | + | C2H1g21755 | CX1g007004 | LOC_Os01g71280 | Os01g0939600 | - | Detail |
| C1H1g21264 | 1:36,760,002-36,773,868 | + | C2H1g29286 | - | LOC_Os01g71300 | Os01g0939700 | - | Detail |
| C1H1g12592 | 1:36,774,143-36,779,177 | + | C2H1g28290 | - | LOC_Os01g71300 | Os01g0939700 | - | Detail |
| C1H1g26080 | 1:36,811,858-36,814,634 | + | C2H1g22141 | CX1g000893 | LOC_Os01g71310 | Os01g0940000 | CKX4, OsCKX4, ckx4, OsSCRM, OsSCRM2, SCRM, SCRM2 | Detail |
| C1H1g08967 | 1:36,817,457-36,823,509 | - | C2H1g01876 | CX1g004002 | LOC_Os01g71320 | Os01g0940100 | - | Detail |
| C1H1g04585 | 1:36,844,904-36,845,442 | + | C2H1g06863 | CX1g006883 | LOC_Os01g71330 | Os01g0940600 | - | Detail |
| C1H1g16091 | 1:36,848,582-36,850,305 | + | C2H1g01858 | CX1g000254 | LOC_Os01g71340 | Os01g0940700 | - | Detail |
| C1H1g10602 | 1:36,851,597-36,852,899 | + | C2H1g03308 | CX1g000254 | LOC_Os01g71350 | Os01g0940800 | Gns6 | Detail |
| C1H1g11005 | 1:36,857,741-36,858,706 | + | C2H1g25094 | CX1g000254 | LOC_Os01g71860 | Os01g0947000 | - | Detail |
| C1H1g17272 | 1:36,866,819-36,867,937 | + | C2H1g16744 | CX1g000254 | LOC_Os01g71410 | Os01g0941500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g11776 | 4:25,433,671-25,435,470 | - | C1H4g16820 | CX4g033099 | LOC_Os04g49610 | Os04g0585600 | - | Detail |
| C2H4g11266 | 4:25,439,551-25,441,167 | - | C1H4g09246 | - | LOC_Os04g49620 | Os04g0585700 | - | Detail |
| C2H4g30476 | 4:25,454,543-25,455,145 | - | C1H4g08474 | - | LOC_Os04g49650 | Os04g0585900 | - | Detail |
| C2H4g22317 | 4:25,459,080-25,459,563 | - | C1H4g14819 | - | LOC_Os04g49660 | Os04g0586000 | - | Detail |
| C2H4g15562 | 4:25,470,204-25,470,497 | - | C1H4g30549 | - | LOC_Os04g49670 | Os04g0586100 | - | Detail |
| C2H4g24989 | 4:25,473,648-25,473,968 | - | C1H4g10022 | - | LOC_Os04g49680 | Os04g0586200 | - | Detail |
| C2H4g18410 | 4:25,488,355-25,489,884 | + | C1H4g24641 | CX4g034550 | LOC_Os04g49690 | Os04g0586500 | - | Detail |
| C2H4g01934 | 4:25,493,577-25,494,656 | + | C1H4g23703 | CX4g033100 | LOC_Os04g49700 | Os04g0586700 | - | Detail |
| C2H4g07006 | 4:25,498,695-25,499,261 | + | - | CX4g036093 | LOC_Os04g49720 | Os04g0587100 | OsINVINH3 | Detail |
| C2H4g20832 | 4:25,500,676-25,501,236 | + | - | CX4g036093 | LOC_Os04g49730 | Os04g0587200 | OsPMEI20 | Detail |
| C2H4g02957 | 4:25,503,576-25,507,184 | + | C1H4g07526 | CX4g035244 | LOC_Os04g49739 | Os04g0587300 | - | Detail |
| C2H4g30591 | 4:25,509,655-25,512,306 | + | C1H4g28454 | CX4g035249 | LOC_Os04g49757 | Os04g0587500 | - | Detail |
| C2H4g11072 | 4:25,517,585-25,518,430 | - | - | CX4g034789 | LOC_Os04g49850 | Os04g0588000 | - | Detail |
| C2H4g10754 | 4:25,521,440-25,531,640 | + | C1H4g11735 | CX4g034668 | LOC_Os04g49860 | Os04g0588200 | OsDNA2_1 | Detail |
| C2H4g21457 | 4:25,532,796-25,534,466 | + | C1H4g26119 | CX4g033123 | LOC_Os04g49870 | Os04g0588350 | - | Detail |
| C2H4g16752 | 4:25,544,587-25,552,061 | + | C1H4g17218 | CX4g033335 | LOC_Os04g49890 | Os04g0588700 | - | Detail |
| C2H4g03312 | 4:25,555,113-25,561,966 | + | C1H4g26451 | CX4g033761 | LOC_Os04g49900 | Os04g0588700 | - | Detail |
| C2H4g21025 | 4:25,582,957-25,584,895 | + | C1H4g17761 | CX4g035587 | LOC_Os04g49940 | Os04g0589200 | - | Detail |
| C2H4g11578 | 4:25,612,721-25,613,421 | + | C1H4g24594 | CX4g031423 | - | - | - | Detail |
| C2H4g03333 | 4:25,638,848-25,641,001 | + | - | CX4g033306 | - | Os04g0589400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |