| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g07210 | 1:36,701,248-36,706,802 | + | C2H1g00426 | CX1g000756 | LOC_Os01g71200 | Os01g0938200 | - | Detail |
| C1H1g13834 | 1:36,709,163-36,710,152 | - | - | CX1g000266 | LOC_Os01g71210 | Os01g0938400 | - | Detail |
| C1H1g26126 | 1:36,712,091-36,717,052 | - | C2H1g14108 | CX1g004308 | LOC_Os01g71220 | Os01g0938600 | - | Detail |
| C1H1g10097 | 1:36,721,952-36,724,804 | + | C2H1g29372 | CX1g004180 | LOC_Os01g71230 | Os01g0938900 | - | Detail |
| C1H1g13399 | 1:36,728,801-36,729,172 | + | C2H1g06212 | CX1g005905 | - | Os01g0939000 | - | Detail |
| C1H1g17991 | 1:36,730,047-36,736,200 | + | C2H1g03097 | CX1g004665 | LOC_Os01g71240 | Os01g0939100 | - | Detail |
| C1H1g18399 | 1:36,736,922-36,738,715 | - | C2H1g07622 | CX1g005484 | LOC_Os01g71250 | Os01g0939200 | - | Detail |
| C1H1g15855 | 1:36,739,998-36,743,046 | - | C2H1g16653 | CX1g002440 | LOC_Os01g71256 | Os01g0939300 | - | Detail |
| C1H1g14395 | 1:36,745,046-36,748,212 | - | C2H1g17831 | CX1g005035 | LOC_Os01g71262 | Os01g0939400 | - | Detail |
| C1H1g17803 | 1:36,750,934-36,752,148 | + | C2H7g09412 | CX1g001018 | LOC_Os01g71270 | Os01g0939500 | - | Detail |
| C1H1g19591 | 1:36,754,537-36,758,865 | + | C2H1g21755 | CX1g007004 | LOC_Os01g71280 | Os01g0939600 | - | Detail |
| C1H1g21264 | 1:36,760,002-36,773,868 | + | C2H1g29286 | - | LOC_Os01g71300 | Os01g0939700 | - | Detail |
| C1H1g12592 | 1:36,774,143-36,779,177 | + | C2H1g28290 | - | LOC_Os01g71300 | Os01g0939700 | - | Detail |
| C1H1g26080 | 1:36,811,858-36,814,634 | + | C2H1g22141 | CX1g000893 | LOC_Os01g71310 | Os01g0940000 | CKX4, OsCKX4, ckx4, OsSCRM, OsSCRM2, SCRM, SCRM2 | Detail |
| C1H1g08967 | 1:36,817,457-36,823,509 | - | C2H1g01876 | CX1g004002 | LOC_Os01g71320 | Os01g0940100 | - | Detail |
| C1H1g04585 | 1:36,844,904-36,845,442 | + | C2H1g06863 | CX1g006883 | LOC_Os01g71330 | Os01g0940600 | - | Detail |
| C1H1g16091 | 1:36,848,582-36,850,305 | + | C2H1g01858 | CX1g000254 | LOC_Os01g71340 | Os01g0940700 | - | Detail |
| C1H1g10602 | 1:36,851,597-36,852,899 | + | C2H1g03308 | CX1g000254 | LOC_Os01g71350 | Os01g0940800 | Gns6 | Detail |
| C1H1g11005 | 1:36,857,741-36,858,706 | + | C2H1g25094 | CX1g000254 | LOC_Os01g71860 | Os01g0947000 | - | Detail |
| C1H1g17272 | 1:36,866,819-36,867,937 | + | C2H1g16744 | CX1g000254 | LOC_Os01g71410 | Os01g0941500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g24829 | 11:24,833,235-24,839,165 | + | C1H11g18630 | - | - | Os11g0696600 | - | Detail |
| C2H11g22023 | 11:24,840,079-24,840,792 | + | - | - | - | - | - | Detail |
| C2H11g28625 | 11:24,844,221-24,845,573 | + | C1H11g09166 | - | - | - | - | Detail |
| C2H11g02299 | 11:24,847,897-24,850,142 | - | C1H11g18304 | CX11g014713 | LOC_Os11g47390 | Os11g0696900 | - | Detail |
| C2H11g05964 | 11:24,851,652-24,852,573 | - | - | CX11g014536 | - | - | - | Detail |
| C2H11g01524 | 11:24,877,507-24,877,853 | + | C1H11g09170 | CX11g014979 | LOC_Os11g47441 | Os11g0699532 | - | Detail |
| C2H11g22015 | 11:24,908,771-24,911,844 | + | C1H11g28594 | CX11g014691 | LOC_Os11g47447 | Os11g0700100 | - | Detail |
| C2H11g14378 | 11:24,958,996-24,961,251 | - | C1H11g17473 | CX11g014459 | LOC_Os11g47460 | Os11g0700500 | OsMYBAS1 | Detail |
| C2H11g14896 | 11:24,976,825-24,977,172 | + | - | - | - | - | - | Detail |
| C2H11g03415 | 11:24,979,391-24,980,305 | - | C1H11g28548 | CX11g010968 | LOC_Os11g47500 | Os11g0700900 | - | Detail |
| C2H11g19864 | 11:24,984,073-24,985,011 | - | C1H11g28548 | CX11g013722 | LOC_Os11g47510 | Os11g0701000 | - | Detail |
| C2H11g21265 | 11:24,986,477-24,987,346 | + | C1H11g28548 | CX11g014219 | LOC_Os11g47520 | Os11g0701100 | - | Detail |
| C2H11g11867 | 11:24,989,749-24,990,624 | + | C1H11g14521 | CX11g014219 | LOC_Os11g47530 | Os11g0701200 | - | Detail |
| C2H11g24600 | 11:25,003,819-25,004,688 | + | C1H11g25719 | CX11g014219 | LOC_Os11g47550 | Os11g0701400 | - | Detail |
| C2H11g14715 | 11:25,007,418-25,008,272 | + | C1H11g05290 | CX11g014219 | LOC_Os11g47560 | Os11g0701500 | - | Detail |
| C2H11g14762 | 11:25,013,082-25,013,924 | + | C1H11g00801 | CX11g014219 | LOC_Os11g47570 | Os11g0701600 | - | Detail |
| C2H11g09809 | 11:25,019,236-25,020,150 | + | C1H11g14521 | CX11g013722 | LOC_Os11g47580 | Os11g0701800 | RIXI | Detail |
| C2H11g22025 | 11:25,021,447-25,022,349 | - | C1H11g05570 | CX11g010989 | LOC_Os11g47590 | Os11g0701900 | - | Detail |
| C2H11g10596 | 11:25,024,338-25,025,243 | - | C1H11g05570 | CX11g012151 | LOC_Os11g47600 | Os11g0702100 | - | Detail |
| C2H11g15669 | 11:25,025,910-25,026,818 | - | C1H11g05570 | CX11g013345 | LOC_Os11g47610 | Os11g0702200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |