| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g15249 | 1:36,597,526-36,600,058 | - | C2H1g14471 | CX1g006168 | LOC_Os01g71040 | Os01g0936700 | - | Detail |
| C1H1g27605 | 1:36,602,821-36,607,885 | - | C2H1g12293 | CX1g005192 | LOC_Os01g71050 | Os01g0936800 | - | Detail |
| C1H1g13348 | 1:36,612,556-36,613,848 | - | C2H1g14811 | CX1g004383 | LOC_Os01g71060 | Os01g0936900 | - | Detail |
| C1H1g22088 | 1:36,617,529-36,618,758 | - | C2H1g05119 | CX1g004383 | LOC_Os01g71060 | Os01g0936900 | - | Detail |
| C1H1g05005 | 1:36,619,881-36,621,170 | - | C2H1g02110 | CX1g004383 | LOC_Os01g71060 | Os01g0936900 | - | Detail |
| C1H1g06025 | 1:36,622,908-36,624,185 | - | C2H1g24708 | CX1g004383 | LOC_Os01g71070 | Os01g0937000 | - | Detail |
| C1H1g25477 | 1:36,626,583-36,627,086 | - | - | - | - | Os01g0596425 | - | Detail |
| C1H1g07177 | 1:36,631,929-36,633,197 | - | C2H1g13049 | CX1g004383 | LOC_Os01g71080 | Os01g0937050 | OsCLP | Detail |
| C1H1g00301 | 1:36,634,391-36,635,647 | - | C2H1g13049 | CX1g004383 | LOC_Os01g71090 | Os01g0937100 | - | Detail |
| C1H1g30610 | 1:36,636,676-36,644,949 | - | C2H1g06509 | CX1g004383 | LOC_Os01g71094 | Os01g0937300 | - | Detail |
| C1H1g14403 | 1:36,647,390-36,651,274 | - | C2H1g15329 | CX1g005296 | LOC_Os01g71106 | Os01g0536466 | - | Detail |
| C1H1g10035 | 1:36,652,176-36,657,834 | - | C2H1g15329 | CX1g005296 | LOC_Os01g71114 | Os01g0937400 | - | Detail |
| C1H1g12751 | 1:36,664,976-36,672,392 | - | C2H1g06509 | CX1g004383 | LOC_Os01g71094 | Os01g0937200 | - | Detail |
| C1H1g26750 | 1:36,673,799-36,676,666 | - | C2H1g08503 | CX1g004383 | LOC_Os01g71106 | Os01g0536466 | - | Detail |
| C1H1g17052 | 1:36,677,771-36,679,556 | + | C2H1g30429 | CX1g000753 | LOC_Os01g71130 | Os01g0937500 | - | Detail |
| C1H1g08199 | 1:36,681,990-36,683,318 | + | C2H1g30429 | CX1g003344 | LOC_Os01g71140 | Os01g0937600 | - | Detail |
| C1H1g20166 | 1:36,685,077-36,686,375 | + | C2H1g30429 | CX1g001482 | LOC_Os01g71160 | Os01g0937800 | - | Detail |
| C1H1g10073 | 1:36,687,380-36,687,841 | + | - | CX1g005072 | LOC_Os01g71170 | Os01g0937900 | - | Detail |
| C1H1g30231 | 1:36,691,517-36,694,264 | + | C2H1g19731 | CX1g006762 | LOC_Os01g71180 | Os01g0260000 | - | Detail |
| C1H1g13460 | 1:36,694,833-36,696,535 | + | C2H1g19731 | CX1g006762 | LOC_Os01g71190 | Os01g0938100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21608 | 3:27,656,719-27,660,241 | - | C1H3g23470 | CX3g028973 | LOC_Os03g52630 | Os03g0736300 | - | Detail |
| C2H3g15503 | 3:27,664,564-27,668,007 | - | C1H3g16767 | CX3g029628 | LOC_Os03g52640 | Os03g0736400 | - | Detail |
| C2H3g14297 | 3:27,669,405-27,673,074 | + | C1H3g06383 | CX3g026452 | LOC_Os03g52650 | Os03g0736500 | - | Detail |
| C2H3g25472 | 3:27,673,881-27,674,926 | - | C1H3g27583 | CX3g030782 | LOC_Os03g52670 | Os03g0736700 | - | Detail |
| C2H3g06997 | 3:27,690,841-27,694,864 | - | C1H3g22100 | CX3g030023 | LOC_Os03g52690 | Os03g0737000 | - | Detail |
| C2H3g03773 | 3:27,700,068-27,708,325 | - | C1H3g13284 | CX3g030091 | LOC_Os03g52700 | Os03g0737200 | OsHOS1 | Detail |
| C2H3g13435 | 3:27,709,054-27,711,006 | - | C1H3g01016 | CX3g030361 | LOC_Os03g52720 | Os03g0737300 | - | Detail |
| C2H3g06862 | 3:27,713,948-27,715,594 | - | C1H3g28619 | CX3g030361 | LOC_Os03g52730 | Os03g0737400 | - | Detail |
| C2H3g04382 | 3:27,716,139-27,720,319 | + | C1H3g18700 | CX3g025820 | LOC_Os03g52750 | Os03g0737600 | - | Detail |
| C2H3g27223 | 3:27,724,488-27,727,069 | - | C1H3g06923 | CX3g026634 | LOC_Os03g52760 | Os03g0737701 | OsMIK, LPA | Detail |
| C2H3g08831 | 3:27,729,452-27,739,232 | + | C1H3g13520 | CX3g025574 | LOC_Os03g52770 | Os03g0737800 | - | Detail |
| C2H3g00418 | 3:27,739,440-27,742,656 | - | C1H3g22442 | CX3g026366 | LOC_Os03g52780 | Os03g0737900 | - | Detail |
| C2H3g24375 | 3:27,742,829-27,746,487 | + | C1H3g19238 | CX3g026865 | LOC_Os03g52794 | Os03g0738000 | - | Detail |
| C2H3g01060 | 3:27,747,275-27,765,946 | + | C1H3g14512 | CX3g030189 | LOC_Os03g52794 | Os03g0738200 | - | Detail |
| C2H3g05635 | 3:27,767,482-27,772,151 | + | C1H3g21044 | CX3g026362 | LOC_Os03g52840 | Os03g0738400 | - | Detail |
| C2H3g05845 | 3:27,783,515-27,787,131 | + | C1H3g07947 | CX3g025013 | LOC_Os03g52860 | Os03g0738600 | LOX-L2, OsLOX-L2, LOX1.1, LOX L-2, OsLOX2 | Detail |
| C2H3g02923 | 3:27,794,046-27,796,994 | + | C1H3g24267 | CX3g030893 | LOC_Os03g52880 | Os03g0738900 | - | Detail |
| C2H3g01404 | 3:27,805,911-27,807,678 | + | C1H3g14490 | CX3g028113 | LOC_Os03g52910 | Os03g0739700 | - | Detail |
| C2H3g15580 | 3:27,837,312-27,841,357 | + | C1H3g22532 | CX3g026120 | LOC_Os03g52970 | Os03g0740600 | - | Detail |
| C2H3g17064 | 3:27,842,274-27,846,884 | + | C1H3g30167 | CX3g027471 | LOC_Os03g52980 | Os03g0740700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |