| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g15249 | 1:36,597,526-36,600,058 | - | C2H1g14471 | CX1g006168 | LOC_Os01g71040 | Os01g0936700 | - | Detail |
| C1H1g27605 | 1:36,602,821-36,607,885 | - | C2H1g12293 | CX1g005192 | LOC_Os01g71050 | Os01g0936800 | - | Detail |
| C1H1g13348 | 1:36,612,556-36,613,848 | - | C2H1g14811 | CX1g004383 | LOC_Os01g71060 | Os01g0936900 | - | Detail |
| C1H1g22088 | 1:36,617,529-36,618,758 | - | C2H1g05119 | CX1g004383 | LOC_Os01g71060 | Os01g0936900 | - | Detail |
| C1H1g05005 | 1:36,619,881-36,621,170 | - | C2H1g02110 | CX1g004383 | LOC_Os01g71060 | Os01g0936900 | - | Detail |
| C1H1g06025 | 1:36,622,908-36,624,185 | - | C2H1g24708 | CX1g004383 | LOC_Os01g71070 | Os01g0937000 | - | Detail |
| C1H1g25477 | 1:36,626,583-36,627,086 | - | - | - | - | Os01g0596425 | - | Detail |
| C1H1g07177 | 1:36,631,929-36,633,197 | - | C2H1g13049 | CX1g004383 | LOC_Os01g71080 | Os01g0937050 | OsCLP | Detail |
| C1H1g00301 | 1:36,634,391-36,635,647 | - | C2H1g13049 | CX1g004383 | LOC_Os01g71090 | Os01g0937100 | - | Detail |
| C1H1g30610 | 1:36,636,676-36,644,949 | - | C2H1g06509 | CX1g004383 | LOC_Os01g71094 | Os01g0937300 | - | Detail |
| C1H1g14403 | 1:36,647,390-36,651,274 | - | C2H1g15329 | CX1g005296 | LOC_Os01g71106 | Os01g0536466 | - | Detail |
| C1H1g10035 | 1:36,652,176-36,657,834 | - | C2H1g15329 | CX1g005296 | LOC_Os01g71114 | Os01g0937400 | - | Detail |
| C1H1g12751 | 1:36,664,976-36,672,392 | - | C2H1g06509 | CX1g004383 | LOC_Os01g71094 | Os01g0937200 | - | Detail |
| C1H1g26750 | 1:36,673,799-36,676,666 | - | C2H1g08503 | CX1g004383 | LOC_Os01g71106 | Os01g0536466 | - | Detail |
| C1H1g17052 | 1:36,677,771-36,679,556 | + | C2H1g30429 | CX1g000753 | LOC_Os01g71130 | Os01g0937500 | - | Detail |
| C1H1g08199 | 1:36,681,990-36,683,318 | + | C2H1g30429 | CX1g003344 | LOC_Os01g71140 | Os01g0937600 | - | Detail |
| C1H1g20166 | 1:36,685,077-36,686,375 | + | C2H1g30429 | CX1g001482 | LOC_Os01g71160 | Os01g0937800 | - | Detail |
| C1H1g10073 | 1:36,687,380-36,687,841 | + | - | CX1g005072 | LOC_Os01g71170 | Os01g0937900 | - | Detail |
| C1H1g30231 | 1:36,691,517-36,694,264 | + | C2H1g19731 | CX1g006762 | LOC_Os01g71180 | Os01g0260000 | - | Detail |
| C1H1g13460 | 1:36,694,833-36,696,535 | + | C2H1g19731 | CX1g006762 | LOC_Os01g71190 | Os01g0938100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g29615 | 1:24,334,968-24,346,372 | - | C1H1g06521 | CX1g001948 | LOC_Os01g47740 | Os01g0667700 | - | Detail |
| C2H1g11333 | 1:24,372,810-24,374,557 | + | C1H1g13825 | CX1g002850 | LOC_Os01g47770 | Os01g0668000 | - | Detail |
| C2H1g26438 | 1:24,381,883-24,390,911 | + | C1H1g02552 | CX1g000496 | LOC_Os01g47800 | Os01g0668300 | - | Detail |
| C2H1g02543 | 1:24,403,092-24,405,485 | - | C1H1g13739 | CX1g003920 | LOC_Os01g47820 | Os01g0668600 | SDRLK-12 | Detail |
| C2H1g04620 | 1:24,423,794-24,426,253 | - | C1H1g14765 | CX1g003920 | LOC_Os01g47900 | Os01g0669100 | - | Detail |
| C2H1g07553 | 1:24,441,401-24,443,857 | - | C1H1g01688 | CX1g003964 | LOC_Os01g48000 | Os01g0670100 | SDRLK-13 | Detail |
| C2H1g01164 | 1:24,461,781-24,464,063 | - | C1H1g12093 | CX1g000226 | LOC_Os01g48040 | Os01g0670600 | SDRLK-14 | Detail |
| C2H1g04896 | 1:24,471,402-24,478,762 | - | C1H1g22206 | CX1g006814 | LOC_Os01g48060 | Os01g0670800 | OsARF2, OsETT2, ARF3a | Detail |
| C2H1g16519 | 1:24,501,094-24,504,471 | + | - | - | - | - | - | Detail |
| C2H1g18055 | 1:24,510,831-24,514,902 | - | C1H1g00357 | CX1g006626 | LOC_Os01g48130 | Os01g0672100 | - | Detail |
| C2H1g23590 | 1:24,533,270-24,549,540 | + | C1H1g22608 | CX1g005190 | LOC_Os01g48170 | Os01g0672201 | - | Detail |
| C2H1g10699 | 1:24,552,512-24,556,095 | + | C1H1g30509 | CX1g001676 | LOC_Os01g48190 | Os01g0672400 | - | Detail |
| C2H1g08595 | 1:24,576,950-24,582,684 | + | C1H1g25004 | CX1g000126 | LOC_Os01g48210 | Os01g0672700 | - | Detail |
| C2H1g25350 | 1:24,583,399-24,586,146 | - | C1H1g22345 | CX1g006595 | LOC_Os01g48220 | Os01g0672800 | - | Detail |
| C2H1g23016 | 1:24,608,150-24,614,752 | - | C1H1g22730 | CX1g004722 | LOC_Os01g48270 | Os01g0673500 | - | Detail |
| C2H1g16188 | 1:24,616,582-24,619,561 | - | C1H1g16906 | CX1g000015 | LOC_Os01g48280 | Os01g0673600 | OsUbc13, Ubc13, OsUBC47, UBC47 | Detail |
| C2H1g27008 | 1:24,625,647-24,626,171 | + | C1H1g29519 | CX1g005558 | LOC_Os01g48290 | Os01g0673700 | - | Detail |
| C2H1g24331 | 1:24,626,467-24,626,711 | - | - | - | - | - | - | Detail |
| C2H1g05416 | 1:24,627,455-24,630,878 | - | C1H1g26426 | CX1g003719 | LOC_Os01g48300 | Os01g0673800 | - | Detail |
| C2H1g03818 | 1:24,631,116-24,635,918 | - | C1H1g29626 | CX1g005342 | LOC_Os01g48310 | Os01g0673900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |