| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g06146 | 1:36,465,023-36,469,872 | + | C2H1g15293 | CX1g004396 | LOC_Os01g70800 | Os01g0934200 | - | Detail |
| C1H1g03023 | 1:36,471,773-36,480,215 | + | C2H1g05192 | CX1g002755 | LOC_Os01g70810 | Os01g0934300 | - | Detail |
| C1H1g01920 | 1:36,481,607-36,484,453 | + | C2H1g07442 | CX1g000166 | LOC_Os01g70820 | Os01g0934400 | - | Detail |
| C1H1g08883 | 1:36,487,288-36,488,344 | - | C2H1g08100 | CX1g006318 | LOC_Os01g70830 | Os01g0934600 | - | Detail |
| C1H1g14267 | 1:36,490,142-36,491,141 | - | C2H1g18717 | CX1g006318 | LOC_Os01g70840 | Os01g0934700 | - | Detail |
| C1H1g16887 | 1:36,491,899-36,493,748 | - | C2H1g19631 | CX1g006318 | LOC_Os01g70850 | Os01g0934800 | - | Detail |
| C1H1g17715 | 1:36,495,613-36,496,601 | - | C2H1g07927 | CX1g006318 | LOC_Os01g70860 | Os01g0934900 | - | Detail |
| C1H1g07097 | 1:36,499,601-36,502,840 | - | C2H1g04071 | CX1g002808 | LOC_Os01g70870 | Os01g0935000 | - | Detail |
| C1H1g12407 | 1:36,509,952-36,510,482 | - | C2H1g11057 | CX1g000564 | LOC_Os01g70880 | Os01g0935100 | OsNF-YB5, HAP3J | Detail |
| C1H1g25287 | 1:36,517,676-36,518,212 | - | C2H1g11057 | CX1g000564 | LOC_Os01g70890 | Os01g0935200 | OsNF-YB6, HAP3G | Detail |
| C1H1g19575 | 1:36,540,058-36,542,511 | + | C2H1g01962 | CX1g002476 | LOC_Os01g70920 | Os01g0935300 | - | Detail |
| C1H1g24703 | 1:36,543,841-36,545,407 | - | C2H1g06966 | CX1g007182 | LOC_Os01g70930 | Os01g0935400 | - | Detail |
| C1H1g06250 | 1:36,547,310-36,553,062 | + | C2H1g17944 | CX1g003330 | LOC_Os01g70940 | Os01g0935500 | - | Detail |
| C1H1g31603 | 1:36,553,053-36,560,172 | - | C2H1g19180 | CX1g002999 | LOC_Os01g70950 | Os01g0935600 | - | Detail |
| C1H1g21314 | 1:36,561,620-36,566,122 | + | C2H1g01879 | CX1g006234 | LOC_Os01g70960 | Os01g0935700 | - | Detail |
| C1H1g21557 | 1:36,566,601-36,568,732 | - | C2H1g06725 | CX1g006518 | LOC_Os01g70970 | Os01g0935800 | - | Detail |
| C1H1g23176 | 1:36,573,517-36,575,692 | - | C2H1g20555 | CX1g006977 | LOC_Os01g70980 | Os01g0935900 | - | Detail |
| C1H1g15115 | 1:36,577,855-36,578,169 | + | C2H1g05731 | CX1g006835 | LOC_Os01g70990 | Os01g0936000 | - | Detail |
| C1H1g20598 | 1:36,583,230-36,587,692 | + | C2H1g05708 | CX1g005643 | LOC_Os01g71000 | Os01g0936100 | - | Detail |
| C1H1g13211 | 1:36,587,865-36,591,622 | - | C2H1g29418 | CX1g003103 | LOC_Os01g71010 | Os01g0936200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g15340 | 5:1,779,981-1,784,195 | + | C1H5g15318 | CX5g039240 | LOC_Os05g04520 | Os05g0135800 | RLCK178, OsPti1a, OsRLCK178 | Detail |
| C2H5g09071 | 5:1,784,743-1,786,926 | - | C1H5g22825 | CX5g040556 | LOC_Os05g04530 | Os05g0135900 | - | Detail |
| C2H5g11738 | 5:1,798,378-1,799,442 | + | - | CX5g040743 | LOC_Os05g04540 | Os05g0136100 | - | Detail |
| C2H5g01548 | 5:1,800,699-1,804,493 | - | C1H5g10755 | CX5g039210 | LOC_Os05g04550 | Os05g0136200 | - | Detail |
| C2H5g23155 | 5:1,829,551-1,835,745 | + | C1H5g30580 | CX5g040521 | LOC_Os05g04584 | Os05g0136900 | OsPMT2, OsAT3 | Detail |
| C2H5g15489 | 5:1,843,721-1,844,729 | + | - | - | - | - | - | Detail |
| C2H5g06046 | 5:1,849,609-1,855,994 | + | C1H5g18480 | CX5g040420 | LOC_Os05g04610 | Os05g0137200 | - | Detail |
| C2H5g14079 | 5:1,857,180-1,858,849 | + | C1H5g19392 | CX5g039843 | LOC_Os05g04620 | Os05g0137300 | - | Detail |
| C2H5g14963 | 5:1,859,884-1,863,799 | + | C1H5g26357 | CX5g040603 | LOC_Os05g04630 | Os05g0137400 | - | Detail |
| C2H5g23559 | 5:1,864,493-1,869,943 | - | C1H5g12317 | CX5g036724 | LOC_Os05g04640 | Os05g0137500 | OsWRKY5 | Detail |
| C2H5g03222 | 5:1,881,639-1,882,913 | + | C1H5g04306 | CX5g037574 | LOC_Os05g04650 | Os05g0137600 | - | Detail |
| C2H5g28363 | 5:1,883,175-1,884,682 | - | C1H5g13155 | - | LOC_Os05g04660 | Os05g0137700 | - | Detail |
| C2H5g07352 | 5:1,899,671-1,900,263 | - | C1H5g04433 | CX1g002314 | LOC_Os05g04700 | Os05g0138300 | OsLti6b | Detail |
| C2H5g19962 | 5:1,916,898-1,919,055 | + | C1H5g25088 | CX5g037589 | LOC_Os05g04740 | Os05g0139100 | APG | Detail |
| C2H5g25266 | 5:1,922,063-1,923,286 | - | C1H5g25511 | CX5g037123 | LOC_Os05g04750 | Os05g0139200 | - | Detail |
| C2H5g23665 | 5:1,933,084-1,934,268 | - | C1H5g18751 | CX5g037123 | LOC_Os05g04770 | Os05g0139300 | - | Detail |
| C2H5g30393 | 5:1,934,410-1,935,053 | + | - | - | - | - | - | Detail |
| C2H5g03061 | 5:1,970,541-1,971,097 | - | C1H5g17291 | CX5g038058 | - | Os05g0140000 | - | Detail |
| C2H5g22528 | 5:1,971,471-1,974,178 | + | C1H5g01364 | CX5g041027 | LOC_Os05g04820 | Os05g0140100 | - | Detail |
| C2H5g28238 | 5:1,982,372-1,984,229 | + | C1H1g13588 | CX5g039047 | LOC_Os05g04830 | Os05g0140300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |