| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g06146 | 1:36,465,023-36,469,872 | + | C2H1g15293 | CX1g004396 | LOC_Os01g70800 | Os01g0934200 | - | Detail |
| C1H1g03023 | 1:36,471,773-36,480,215 | + | C2H1g05192 | CX1g002755 | LOC_Os01g70810 | Os01g0934300 | - | Detail |
| C1H1g01920 | 1:36,481,607-36,484,453 | + | C2H1g07442 | CX1g000166 | LOC_Os01g70820 | Os01g0934400 | - | Detail |
| C1H1g08883 | 1:36,487,288-36,488,344 | - | C2H1g08100 | CX1g006318 | LOC_Os01g70830 | Os01g0934600 | - | Detail |
| C1H1g14267 | 1:36,490,142-36,491,141 | - | C2H1g18717 | CX1g006318 | LOC_Os01g70840 | Os01g0934700 | - | Detail |
| C1H1g16887 | 1:36,491,899-36,493,748 | - | C2H1g19631 | CX1g006318 | LOC_Os01g70850 | Os01g0934800 | - | Detail |
| C1H1g17715 | 1:36,495,613-36,496,601 | - | C2H1g07927 | CX1g006318 | LOC_Os01g70860 | Os01g0934900 | - | Detail |
| C1H1g07097 | 1:36,499,601-36,502,840 | - | C2H1g04071 | CX1g002808 | LOC_Os01g70870 | Os01g0935000 | - | Detail |
| C1H1g12407 | 1:36,509,952-36,510,482 | - | C2H1g11057 | CX1g000564 | LOC_Os01g70880 | Os01g0935100 | OsNF-YB5, HAP3J | Detail |
| C1H1g25287 | 1:36,517,676-36,518,212 | - | C2H1g11057 | CX1g000564 | LOC_Os01g70890 | Os01g0935200 | OsNF-YB6, HAP3G | Detail |
| C1H1g19575 | 1:36,540,058-36,542,511 | + | C2H1g01962 | CX1g002476 | LOC_Os01g70920 | Os01g0935300 | - | Detail |
| C1H1g24703 | 1:36,543,841-36,545,407 | - | C2H1g06966 | CX1g007182 | LOC_Os01g70930 | Os01g0935400 | - | Detail |
| C1H1g06250 | 1:36,547,310-36,553,062 | + | C2H1g17944 | CX1g003330 | LOC_Os01g70940 | Os01g0935500 | - | Detail |
| C1H1g31603 | 1:36,553,053-36,560,172 | - | C2H1g19180 | CX1g002999 | LOC_Os01g70950 | Os01g0935600 | - | Detail |
| C1H1g21314 | 1:36,561,620-36,566,122 | + | C2H1g01879 | CX1g006234 | LOC_Os01g70960 | Os01g0935700 | - | Detail |
| C1H1g21557 | 1:36,566,601-36,568,732 | - | C2H1g06725 | CX1g006518 | LOC_Os01g70970 | Os01g0935800 | - | Detail |
| C1H1g23176 | 1:36,573,517-36,575,692 | - | C2H1g20555 | CX1g006977 | LOC_Os01g70980 | Os01g0935900 | - | Detail |
| C1H1g15115 | 1:36,577,855-36,578,169 | + | C2H1g05731 | CX1g006835 | LOC_Os01g70990 | Os01g0936000 | - | Detail |
| C1H1g20598 | 1:36,583,230-36,587,692 | + | C2H1g05708 | CX1g005643 | LOC_Os01g71000 | Os01g0936100 | - | Detail |
| C1H1g13211 | 1:36,587,865-36,591,622 | - | C2H1g29418 | CX1g003103 | LOC_Os01g71010 | Os01g0936200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g29234 | 3:9,589,591-9,592,789 | + | C1H3g09918 | CX3g029447 | LOC_Os03g19300 | Os03g0305700 | - | Detail |
| C2H3g25404 | 3:9,593,061-9,594,512 | - | C1H3g15276 | CX3g025751 | LOC_Os03g19310 | Os03g0305800 | - | Detail |
| C2H3g04492 | 3:9,605,909-9,607,258 | + | C1H3g04998 | CX3g029664 | LOC_Os03g19330 | Os03g0306100 | - | Detail |
| C2H3g27650 | 3:9,608,099-9,625,295 | - | C1H3g22410 | CX3g028723 | LOC_Os03g19340 | Os03g0306200 | - | Detail |
| C2H3g07435 | 3:9,627,515-9,639,295 | - | C1H3g02755 | CX3g027549 | LOC_Os03g19350 | Os03g0306400 | - | Detail |
| C2H3g20582 | 3:9,647,619-9,648,140 | + | C1H3g18574 | CX3g026074 | LOC_Os03g19375 | Os03g0239400 | - | Detail |
| C2H3g07871 | 3:9,651,461-9,651,847 | + | C1H3g08148 | CX3g027392 | LOC_Os03g19380 | Os03g0306800 | - | Detail |
| C2H3g26352 | 3:9,652,500-9,654,378 | - | C1H3g23949 | CX3g025960 | LOC_Os03g19390 | Os03g0306900 | - | Detail |
| C2H3g08753 | 3:9,654,788-9,656,681 | + | C1H3g18672 | CX3g025770 | LOC_Os03g19400 | Os03g0307000 | - | Detail |
| C2H3g28158 | 3:9,658,647-9,666,875 | + | C1H3g26919 | CX3g025641 | LOC_Os03g19410 | Os03g0307100 | - | Detail |
| C2H3g27859 | 3:9,667,653-9,668,684 | + | C1H3g07326 | CX3g028955 | LOC_Os03g19427 | Os03g0307300 | - | Detail |
| C2H3g23633 | 3:9,672,964-9,675,855 | - | C1H3g08713 | CX3g027893 | LOC_Os03g19420 | Os03g0307200 | NAS2, OsNAS2 | Detail |
| C2H3g12347 | 3:9,680,537-9,681,031 | + | C1H3g12875 | CX3g027748 | LOC_Os03g19452 | Os03g0307400 | - | Detail |
| C2H3g00214 | 3:9,683,277-9,684,485 | + | C1H3g10945 | CX3g025182 | LOC_Os03g19452 | Os03g0307400 | - | Detail |
| C2H3g27228 | 3:9,684,900-9,688,173 | + | C1H3g01117 | CX3g028724 | LOC_Os03g19462 | - | - | Detail |
| C2H3g27622 | 3:9,690,908-9,693,250 | + | C1H3g07984 | CX3g026010 | LOC_Os03g19470 | Os03g0307700 | - | Detail |
| C2H3g03655 | 3:9,693,645-9,700,852 | - | C1H3g00240 | CX3g031316 | LOC_Os03g19480 | Os03g0307800 | IEZ1, OsiEZ1, OsSET1, SET1, iEZ1, OsEZ1/OsiEZ1, OsEZ1, EZ1, ez1, OsSET15, SDG718 | Detail |
| C2H3g06844 | 3:9,702,422-9,702,951 | + | C1H3g04726 | CX3g025615 | LOC_Os03g13830 | Os03g0307900 | - | Detail |
| C2H3g23976 | 3:9,704,003-9,706,653 | + | C1H3g19730 | CX3g024948 | LOC_Os03g19500 | Os03g0308000 | SMG3 | Detail |
| C2H3g08220 | 3:9,708,308-9,710,749 | - | C1H3g14154 | CX3g029346 | LOC_Os03g19510 | Os03g0308100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |