| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g21649 | 1:36,073,838-36,079,524 | - | C2H1g25236 | CX1g007063 | LOC_Os01g70340 | Os01g0928400 | - | Detail |
| C1H1g19034 | 1:36,089,137-36,092,975 | - | C2H1g21292 | CX1g003437 | LOC_Os01g70360 | Os01g0928600 | - | Detail |
| C1H1g17988 | 1:36,096,383-36,100,686 | - | C2H1g14237 | CX1g001633 | LOC_Os01g70370 | Os01g0928700 | - | Detail |
| C1H1g16608 | 1:36,103,539-36,107,638 | - | C2H1g14237 | CX1g002751 | LOC_Os01g70380 | Os01g0928800 | - | Detail |
| C1H1g08268 | 1:36,109,321-36,113,962 | + | C2H1g13715 | CX1g000636 | LOC_Os01g70390 | Os01g0929000 | - | Detail |
| C1H1g01681 | 1:36,114,448-36,115,789 | + | C2H1g16469 | CX1g004811 | LOC_Os01g70400 | Os01g0929100 | - | Detail |
| C1H1g00366 | 1:36,116,120-36,120,181 | - | C2H1g21622 | CX1g002810 | LOC_Os01g70410 | Os01g0929200 | - | Detail |
| C1H1g21275 | 1:36,124,450-36,125,915 | - | C2H1g00194 | CX1g000883 | LOC_Os01g70430 | Os01g0929500 | - | Detail |
| C1H1g18317 | 1:36,127,138-36,127,437 | - | - | CX1g003021 | LOC_Os01g70440 | Os01g0929600 | RTS | Detail |
| C1H1g10599 | 1:36,131,917-36,133,171 | + | C2H1g09535 | CX1g000121 | LOC_Os01g70460 | Os01g0930000 | - | Detail |
| C1H1g31478 | 1:36,136,586-36,138,064 | + | C2H1g15098 | CX1g004324 | LOC_Os01g70470 | Os01g0930200 | - | Detail |
| C1H1g10781 | 1:36,147,402-36,151,600 | + | C2H1g16315 | CX1g002298 | LOC_Os01g70490 | Os01g0930400 | HAK5, OsHAK5 | Detail |
| C1H1g09790 | 1:36,155,084-36,155,788 | - | - | CX1g000811 | LOC_Os01g70500 | Os01g0930500 | - | Detail |
| C1H1g02378 | 1:36,160,659-36,165,056 | + | C2H1g13922 | CX1g001641 | LOC_Os01g70520 | Os01g0930800 | - | Detail |
| C1H1g24922 | 1:36,166,148-36,167,112 | + | C2H1g21447 | CX1g002785 | LOC_Os01g70525 | Os01g0930900 | - | Detail |
| C1H1g13018 | 1:36,170,310-36,171,507 | + | C2H1g24743 | - | - | Os01g0930950 | - | Detail |
| C1H1g22732 | 1:36,173,719-36,177,179 | - | C2H1g18332 | CX1g003885 | LOC_Os01g70550 | - | - | Detail |
| C1H1g09506 | 1:36,178,604-36,179,757 | - | C2H1g18456 | CX1g003420 | LOC_Os01g70560 | Os01g0931200 | - | Detail |
| C1H1g24833 | 1:36,180,385-36,183,751 | - | C2H1g06067 | CX1g006757 | LOC_Os01g70570 | Os01g0931300 | - | Detail |
| C1H1g13658 | 1:36,184,330-36,187,370 | - | C2H1g10796 | CX1g003208 | LOC_Os01g70580 | Os01g0931400 | ROX1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g28905 | 5:9,107,917-9,109,364 | - | C1H5g26341 | CX5g040110 | LOC_Os05g19570 | Os05g0276500 | OsEXPA3 | Detail |
| C2H5g07930 | 5:9,137,558-9,138,574 | - | C1H5g09212 | CX5g038660 | LOC_Os05g19600 | Os05g0277000 | - | Detail |
| C2H5g03374 | 5:9,157,292-9,159,827 | - | C1H5g06044 | CX5g040958 | LOC_Os05g19630 | Os05g0277300 | - | Detail |
| C2H5g20956 | 5:9,186,603-9,187,349 | + | C1H5g02530 | CX5g038137 | LOC_Os05g19670 | Os05g0277500 | - | Detail |
| C2H5g25018 | 5:9,249,128-9,255,855 | - | C1H5g11498 | CX5g037933 | LOC_Os05g19910 | Os05g0278500 | OsFMT, OsFMT1, OsAT5, OsAT5/OsFMT | Detail |
| C2H5g00557 | 5:9,270,807-9,271,806 | - | - | CX5g039844 | - | - | - | Detail |
| C2H5g28009 | 5:9,282,859-9,290,634 | - | C1H5g29704 | CX5g039281 | LOC_Os05g19954 | Os05g0279300 | - | Detail |
| C2H5g12080 | 5:9,309,446-9,315,430 | + | C1H5g23736 | CX5g037702 | LOC_Os05g19970 | Os05g0279400 | - | Detail |
| C2H5g08718 | 5:9,320,458-9,330,009 | + | C1H5g23078 | CX5g039549 | LOC_Os05g19974 | Os05g0279600 | - | Detail |
| C2H5g23273 | 5:9,337,131-9,340,143 | + | C1H5g13096 | CX5g039172 | LOC_Os05g20020 | Os05g0279900 | - | Detail |
| C2H5g01527 | 5:9,411,485-9,413,024 | + | C1H5g25005 | CX5g040064 | LOC_Os05g20050 | Os05g0280200 | - | Detail |
| C2H5g23868 | 5:9,415,022-9,418,946 | - | C1H5g28156 | CX5g039890 | - | Os05g0480700 | - | Detail |
| C2H5g28478 | 5:9,448,522-9,451,356 | - | C1H5g26284 | CX5g038222 | LOC_Os05g20100 | Os05g0280500 | - | Detail |
| C2H5g04863 | 5:9,476,010-9,478,803 | - | - | CX5g039194 | - | - | - | Detail |
| C2H5g21904 | 5:9,484,936-9,486,894 | + | - | - | - | - | - | Detail |
| C2H5g02247 | 5:9,509,517-9,509,885 | - | C1H5g03157 | CX5g038694 | LOC_Os05g20420 | - | - | Detail |
| C2H5g18533 | 5:9,522,507-9,524,670 | - | C1H5g05125 | - | - | - | - | Detail |
| C2H5g23953 | 5:9,530,132-9,530,514 | - | C1H5g08577 | - | - | Os02g0216200 | - | Detail |
| C2H5g14404 | 5:10,011,667-10,016,243 | - | C1H5g05724 | CX5g036941 | LOC_Os05g21180 | Os05g0287800 | OsIPCS3 | Detail |
| C2H5g08960 | 5:10,306,871-10,307,263 | + | C1H5g04296 | CX5g039313 | - | Os05g0289100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |