| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g05100 | 1:35,920,454-35,925,881 | - | C2H1g14530 | CX1g004923 | LOC_Os01g70130 | Os01g0925700 | - | Detail |
| C1H1g06053 | 1:35,931,262-35,934,116 | - | C2H1g19195 | CX1g004787 | LOC_Os01g70140 | Os01g0925800 | - | Detail |
| C1H1g15321 | 1:35,935,973-35,936,292 | + | C2H1g28182 | - | LOC_Os01g70150 | - | - | Detail |
| C1H1g31139 | 1:35,939,716-35,941,151 | + | C2H1g01254 | CX1g005513 | LOC_Os01g70160 | Os01g0926200 | - | Detail |
| C1H1g05043 | 1:35,941,560-35,944,486 | - | C2H1g24811 | CX1g001700 | LOC_Os01g70170 | Os01g0926300 | - | Detail |
| C1H1g16684 | 1:35,947,086-35,951,015 | - | C2H1g19540 | CX1g001157 | LOC_Os01g70180 | Os01g0926400 | - | Detail |
| C1H1g06343 | 1:35,956,759-35,960,111 | - | C2H1g05945 | CX1g004584 | LOC_Os01g70190 | Os01g0926600 | OsGT47A, OsGT47-3 | Detail |
| C1H1g07586 | 1:35,962,914-35,965,924 | - | C2H1g24614 | CX1g003254 | LOC_Os01g70200 | Os01g0926700 | OsIRX10, OsGT47-2 | Detail |
| C1H1g25516 | 1:35,976,383-35,980,273 | + | C2H1g22666 | CX1g005241 | LOC_Os01g70210 | Os01g0926800 | OsSec14-4 | Detail |
| C1H1g22961 | 1:35,984,776-35,994,013 | + | C2H1g25867 | CX1g000354 | LOC_Os01g70220 | Os01g0927000 | SDG714 | Detail |
| C1H1g27772 | 1:35,994,811-35,996,256 | + | C2H1g22231 | CX1g006190 | LOC_Os01g70230 | - | - | Detail |
| C1H1g05104 | 1:35,998,444-36,002,453 | - | C2H1g00196 | CX1g006254 | LOC_Os01g70240 | Os01g0927300 | - | Detail |
| C1H1g31575 | 1:36,005,791-36,008,079 | - | C2H1g00196 | CX1g006254 | LOC_Os01g70250 | Os01g0927400 | - | Detail |
| C1H1g20327 | 1:36,010,073-36,014,556 | + | C2H1g20558 | CX1g004439 | LOC_Os01g70260 | Os01g0927500 | - | Detail |
| C1H1g21675 | 1:36,024,911-36,030,188 | + | C2H1g30132 | CX1g000868 | LOC_Os01g70270 | Os01g0927600 | OsARF4, OsARF2 | Detail |
| C1H1g19787 | 1:36,035,010-36,038,724 | + | C2H1g23635 | - | LOC_Os01g70290 | Os01g0223300 | - | Detail |
| C1H1g07966 | 1:36,039,269-36,043,581 | - | C2H1g07834 | CX1g003442 | LOC_Os01g70300 | Os01g0927900 | AK2 | Detail |
| C1H1g21717 | 1:36,044,978-36,047,856 | - | C2H1g22892 | CX1g000725 | LOC_Os01g70310 | Os01g0928000 | OsICE2 | Detail |
| C1H1g29647 | 1:36,053,250-36,060,219 | - | C2H1g11762 | CX1g001603 | LOC_Os01g70320 | Os01g0928100 | OsSCD2, DPH1 | Detail |
| C1H1g31460 | 1:36,068,790-36,072,851 | + | C2H1g15406 | CX1g002248 | LOC_Os01g70330 | Os01g0928300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g03514 | 4:29,448,149-29,448,868 | - | C1H4g29276 | CX4g031690 | LOC_Os04g57180 | Os04g0667400 | M2H, 2-ODD 21 | Detail |
| C2H4g20638 | 4:29,453,004-29,455,947 | - | C1H4g19147 | CX4g033675 | LOC_Os04g57190 | Os04g0667500 | - | Detail |
| C2H4g07967 | 4:29,465,585-29,468,272 | - | C1H4g19147 | CX4g033675 | LOC_Os04g57190 | Os04g0667500 | - | Detail |
| C2H4g26737 | 4:29,471,984-29,473,277 | + | C1H4g27331 | CX4g035023 | LOC_Os04g57200 | Os04g0667600 | OsHIPP24 | Detail |
| C2H4g18780 | 4:29,474,576-29,478,577 | + | C1H4g25251 | CX4g032489 | LOC_Os04g57210 | Os04g0667700 | - | Detail |
| C2H4g23930 | 4:29,479,590-29,481,940 | - | C1H4g10442 | CX4g035437 | LOC_Os04g57220 | Os04g0667800 | - | Detail |
| C2H4g04165 | 4:29,483,130-29,486,877 | + | C1H4g01418 | CX4g031421 | LOC_Os04g57230 | Os04g0667900 | - | Detail |
| C2H4g19726 | 4:29,493,719-29,493,928 | - | - | CX4g032599 | LOC_Os04g57280 | - | - | Detail |
| C2H4g12154 | 4:29,496,010-29,497,272 | + | C1H4g14062 | CX4g035483 | LOC_Os04g57290 | Os04g0668600 | - | Detail |
| C2H4g10729 | 4:29,500,106-29,501,983 | - | - | CX4g031851 | LOC_Os04g57300 | Os04g0668700 | - | Detail |
| C2H4g24314 | 4:29,504,815-29,508,179 | + | C1H4g07320 | CX4g033794 | LOC_Os04g57310 | Os04g0668800 | - | Detail |
| C2H4g10649 | 4:29,508,269-29,511,441 | - | C1H4g11017 | CX4g035618 | LOC_Os04g57320 | Os04g0668900 | IM1, OsIM1, OsIM1a, OsIM2, OsIM, PTOX1 | Detail |
| C2H4g23402 | 4:29,513,570-29,515,132 | - | C1H4g09478 | CX4g035266 | LOC_Os04g57330 | Os04g0669100 | - | Detail |
| C2H4g26783 | 4:29,517,880-29,518,455 | - | C1H4g01273 | CX4g032933 | LOC_Os04g57340 | Os04g0669200 | - | Detail |
| C2H4g26457 | 4:29,521,567-29,524,942 | + | C1H4g10679 | CX4g033726 | LOC_Os04g57350 | Os04g0669300 | - | Detail |
| C2H4g10159 | 4:29,525,812-29,526,486 | + | - | CX4g032922 | LOC_Os04g57360 | Os04g0669475 | - | Detail |
| C2H4g05368 | 4:29,531,719-29,534,324 | - | C1H4g10307 | CX4g034719 | LOC_Os04g57370 | Os04g0669500 | - | Detail |
| C2H4g28278 | 4:29,534,703-29,536,222 | - | C1H4g20800 | CX4g032862 | LOC_Os04g57380 | Os04g0669600 | - | Detail |
| C2H4g09192 | 4:29,536,981-29,540,198 | - | C1H4g20558 | CX4g032503 | LOC_Os04g57400 | Os04g0669800 | - | Detail |
| C2H4g18679 | 4:29,542,726-29,545,857 | - | C1H4g00350 | CX4g034572 | LOC_Os04g57410 | Os04g0669900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |