| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g01597 | 1:35,746,910-35,752,743 | - | C2H1g25723 | CX1g001516 | LOC_Os01g69920 | Os01g0923700 | HK3, OHK2, HK, OsHK3, Ohk, Crl2, Ohk2, OsHK3b | Detail |
| C1H1g00107 | 1:35,785,776-35,788,010 | + | C2H1g29022 | CX1g006361 | LOC_Os01g69930 | Os01g0923800 | - | Detail |
| C1H1g02952 | 1:35,789,350-35,792,293 | - | C2H1g05728 | CX1g005730 | LOC_Os01g69940 | Os01g0923900 | - | Detail |
| C1H1g29264 | 1:35,799,799-35,801,270 | + | C2H1g01923 | CX1g005835 | LOC_Os01g69950 | Os01g0924000 | - | Detail |
| C1H1g10877 | 1:35,806,031-35,806,597 | + | - | CX1g002496 | LOC_Os01g69960 | Os01g0924200 | - | Detail |
| C1H1g10772 | 1:35,809,040-35,813,366 | - | C2H1g07961 | CX1g006541 | LOC_Os01g69970 | Os01g0924300 | - | Detail |
| C1H1g13895 | 1:35,823,618-35,824,574 | + | - | - | LOC_Os01g69980 | Os01g0924400 | - | Detail |
| C1H1g29827 | 1:35,829,371-35,836,055 | - | C2H1g18855 | CX1g005525 | LOC_Os01g69990 | Os01g0924600 | MHZ9 | Detail |
| C1H1g12982 | 1:35,840,514-35,841,436 | + | C2H1g15591 | CX1g002447 | LOC_Os01g70000 | Os01g0924700 | - | Detail |
| C1H1g07165 | 1:35,842,213-35,844,292 | - | C2H1g25318 | CX1g000477 | LOC_Os01g70010 | Os01g0924800 | - | Detail |
| C1H1g27548 | 1:35,847,736-35,853,749 | + | C2H1g12545 | CX1g006526 | LOC_Os01g70020 | Os01g0924900 | - | Detail |
| C1H1g13467 | 1:35,855,067-35,857,104 | + | C2H1g09893 | CX1g005950 | LOC_Os01g63480 | Os01g0924933 | DPW2 | Detail |
| C1H1g03684 | 1:35,861,149-35,861,667 | - | - | CX1g001933 | LOC_Os01g70050 | Os01g0924966 | - | Detail |
| C1H1g14986 | 1:35,874,545-35,890,346 | - | C2H1g12590 | CX1g000475 | LOC_Os01g70060 | Os01g0925000 | - | Detail |
| C1H1g20180 | 1:35,891,826-35,894,737 | - | C2H1g27652 | CX1g005348 | LOC_Os01g70080 | Os01g0335700 | - | Detail |
| C1H1g31830 | 1:35,895,883-35,896,588 | - | C2H1g27652 | CX1g005348 | LOC_Os01g70080 | Os01g0925100 | - | Detail |
| C1H1g19559 | 1:35,898,782-35,901,274 | + | C2H1g21256 | CX1g006900 | LOC_Os01g70090 | Os01g0925200 | - | Detail |
| C1H1g13464 | 1:35,901,649-35,904,771 | - | C2H1g13602 | CX1g005045 | LOC_Os01g70100 | Os01g0925300 | - | Detail |
| C1H1g13112 | 1:35,908,415-35,909,209 | + | C2H1g09289 | CX1g002813 | LOC_Os01g70110 | Os01g0925400 | - | Detail |
| C1H1g25081 | 1:35,919,371-35,923,240 | + | C2H1g09731 | CX1g005897 | LOC_Os01g70120 | Os01g0925600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g13710 | 8:19,260,231-19,263,568 | - | C1H8g18379 | - | LOC_Os08g35900 | Os08g0461000 | - | Detail |
| C2H8g13656 | 8:19,264,802-19,268,588 | - | C1H8g09966 | - | LOC_Os08g35930 | Os08g0461300 | - | Detail |
| C2H8g26333 | 8:19,272,147-19,276,853 | - | C1H8g08122 | - | LOC_Os08g35900 | Os08g0461700 | - | Detail |
| C2H8g06030 | 8:19,277,082-19,280,342 | - | C1H8g19682 | - | LOC_Os08g35960 | Os08g0461800 | - | Detail |
| C2H8g28141 | 8:19,281,476-19,283,279 | - | C1H8g08840 | - | LOC_Os08g36000 | Os08g0462300 | - | Detail |
| C2H8g19475 | 8:19,285,843-19,287,874 | - | C1H8g08751 | - | LOC_Os08g36010 | Os08g0462300 | - | Detail |
| C2H8g17276 | 8:19,299,128-19,304,338 | + | C1H8g09022 | CX8g052774 | LOC_Os08g36020 | Os08g0462700 | OsBRXL1, OsBRXL4 | Detail |
| C2H8g20598 | 8:19,307,091-19,308,044 | - | C1H8g23093 | CX8g053459 | LOC_Os08g36030 | Os08g0462800 | - | Detail |
| C2H8g03012 | 8:19,310,962-19,311,891 | - | C1H8g23093 | CX8g052923 | LOC_Os08g36040 | Os08g0462900 | - | Detail |
| C2H8g15620 | 8:19,315,202-19,315,426 | - | C1H8g15621 | - | LOC_Os08g36050 | - | - | Detail |
| C2H8g08329 | 8:19,338,609-19,339,532 | + | C1H8g19480 | CX8g051103 | LOC_Os08g36110 | Os08g0463500 | - | Detail |
| C2H8g09172 | 8:19,345,885-19,347,968 | + | C1H8g15052 | - | LOC_Os08g36140 | Os08g0463900 | - | Detail |
| C2H8g06047 | 8:19,351,777-19,354,194 | - | C1H8g18952 | CX8g054112 | LOC_Os08g36150 | Os08g0464000 | - | Detail |
| C2H8g18860 | 8:19,367,106-19,368,044 | + | C1H8g24359 | CX8g050999 | LOC_Os08g36170 | Os08g0464400 | - | Detail |
| C2H8g18058 | 8:19,380,443-19,380,850 | - | C1H8g19153 | CX8g054214 | LOC_Os08g36220 | Os08g0465000 | - | Detail |
| C2H8g15248 | 8:19,380,900-19,381,823 | - | C1H8g19153 | CX8g054214 | LOC_Os08g36220 | Os08g0465000 | - | Detail |
| C2H8g06076 | 8:19,386,127-19,386,363 | - | - | CX8g052954 | - | - | - | Detail |
| C2H8g00226 | 8:19,398,227-19,399,729 | + | C1H8g02946 | CX8g053518 | LOC_Os08g36310 | Os08g0465700 | - | Detail |
| C2H8g06054 | 8:19,402,396-19,406,776 | - | C1H8g28808 | CX8g050894 | LOC_Os08g36320 | Os08g0465800 | RicGAD | Detail |
| C2H8g28318 | 8:19,412,111-19,413,679 | + | C1H5g11456 | CX8g053369 | - | Os05g0160800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |