| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g18511 | 1:35,571,362-35,573,189 | + | C2H1g02874 | - | LOC_Os01g69190 | Os01g0921000 | - | Detail |
| C1H1g26741 | 1:35,574,298-35,576,126 | + | C2H1g14807 | - | LOC_Os01g69190 | Os01g0921000 | - | Detail |
| C1H1g17831 | 1:35,577,746-35,580,810 | + | C2H1g26257 | - | LOC_Os01g69190 | Os01g0921000 | - | Detail |
| C1H1g03135 | 1:35,582,586-35,583,896 | + | C2H1g02715 | - | LOC_Os01g69200 | Os01g0921100 | - | Detail |
| C1H1g30764 | 1:35,585,441-35,593,799 | + | C2H1g30128 | CX1g002078 | LOC_Os01g69210 | Os01g0921200 | OsMOGS | Detail |
| C1H1g26651 | 1:35,594,878-35,597,981 | + | C2H1g16671 | CX1g003739 | LOC_Os01g69220 | Os01g0921300 | - | Detail |
| C1H1g12748 | 1:35,599,703-35,601,655 | + | C2H1g02106 | CX1g001141 | LOC_Os01g69230 | Os01g0921400 | - | Detail |
| C1H1g17623 | 1:35,603,311-35,604,902 | - | C2H1g13527 | CX1g000619 | LOC_Os01g69240 | Os01g0921500 | - | Detail |
| C1H1g22149 | 1:35,605,375-35,608,733 | + | C2H1g04376 | CX1g000315 | LOC_Os01g69250 | Os01g0921600 | - | Detail |
| C1H1g03696 | 1:35,621,897-35,623,387 | - | C2H1g29960 | CX1g005205 | LOC_Os01g69270 | Os01g0921800 | WCR1 | Detail |
| C1H1g00715 | 1:35,639,955-35,642,469 | + | C2H1g26525 | CX1g003439 | LOC_Os01g69230 | Os01g0763750 | - | Detail |
| C1H1g14053 | 1:35,651,194-35,652,429 | - | - | CX1g002270 | LOC_Os01g69290 | Os01g0922100 | - | Detail |
| C1H1g03830 | 1:35,677,842-35,682,557 | + | C2H1g09433 | CX1g004693 | LOC_Os01g69830 | Os01g0922600 | OsSPL2 | Detail |
| C1H1g24548 | 1:35,684,114-35,684,368 | - | - | CX1g002100 | LOC_Os01g69840 | Os01g0922700 | - | Detail |
| C1H1g12266 | 1:35,698,942-35,699,139 | + | C2H1g26166 | CX1g007029 | LOC_Os01g69850 | Os01g0922800 | MADS51, OsMADS51, OsMADS65, MADS65 | Detail |
| C1H1g07999 | 1:35,716,982-35,719,827 | + | C2H1g12395 | - | LOC_Os01g69850 | Os01g0922800 | MADS51, OsMADS51, OsMADS65, MADS65 | Detail |
| C1H1g05284 | 1:35,726,381-35,726,776 | + | - | CX1g007002 | LOC_Os01g69870 | Os01g0923000 | - | Detail |
| C1H1g02987 | 1:35,729,982-35,730,209 | + | C2H1g08637 | CX1g005776 | LOC_Os01g69890 | Os01g0923200 | - | Detail |
| C1H1g11016 | 1:35,732,807-35,736,785 | + | C2H1g01640 | CX1g004462 | LOC_Os01g69900 | Os01g0923300 | - | Detail |
| C1H1g13300 | 1:35,740,307-35,746,306 | + | C2H1g04390 | CX1g004735 | LOC_Os01g69910 | Os01g0923600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g01497 | 3:28,972,883-28,975,723 | - | C1H3g24709 | CX3g025964 | LOC_Os03g55640 | Os03g0765200 | - | Detail |
| C2H3g05267 | 3:28,982,740-28,986,255 | - | C1H3g19260 | CX3g030762 | LOC_Os03g55660 | Os03g0765400 | - | Detail |
| C2H3g21899 | 3:28,986,987-28,987,280 | - | C1H3g01103 | CX3g030135 | LOC_Os03g55670 | Os03g0765500 | - | Detail |
| C2H3g10178 | 3:28,987,334-28,988,943 | - | C1H3g21398 | CX3g030135 | LOC_Os03g55670 | - | - | Detail |
| C2H3g20680 | 3:28,990,039-28,991,037 | - | C1H3g25450 | CX3g030205 | LOC_Os03g55680 | Os03g0765500 | - | Detail |
| C2H3g07544 | 3:29,009,628-29,018,821 | - | C1H3g10434 | CX3g026492 | LOC_Os03g55734 | Os03g0766200 | - | Detail |
| C2H3g01139 | 3:29,028,646-29,033,920 | + | C1H3g28511 | CX3g026186 | LOC_Os03g55760 | Os03g0766500 | - | Detail |
| C2H3g02791 | 3:29,037,838-29,040,041 | + | C1H3g11551 | CX3g026597 | LOC_Os03g55784 | Os03g0766900 | - | Detail |
| C2H3g02036 | 3:29,052,567-29,055,644 | - | C1H3g16165 | CX3g026749 | LOC_Os03g55820 | Os03g0767500 | - | Detail |
| C2H3g17261 | 3:29,059,102-29,060,639 | + | C1H3g20103 | - | LOC_Os03g55830 | Os03g0767600 | - | Detail |
| C2H3g25481 | 3:29,061,049-29,062,991 | + | C1H3g10730 | CX3g027804 | LOC_Os03g55830 | Os03g0767600 | - | Detail |
| C2H3g21501 | 3:29,065,629-29,068,055 | + | C1H3g31861 | CX3g028593 | LOC_Os03g55850 | Os03g0767800 | - | Detail |
| C2H3g01498 | 3:29,068,999-29,069,879 | + | C1H3g14127 | CX3g024946 | LOC_Os03g55870 | Os03g0767900 | - | Detail |
| C2H3g08266 | 3:29,077,859-29,082,044 | - | C1H3g26336 | CX3g028693 | LOC_Os03g55890 | Os03g0769000 | - | Detail |
| C2H3g19989 | 3:29,089,478-29,094,215 | - | C1H3g24628 | CX3g027389 | LOC_Os03g55920 | Os03g0769050 | - | Detail |
| C2H3g27533 | 3:29,095,145-29,096,650 | - | C1H3g25789 | CX3g028168 | LOC_Os03g55930 | Os03g0769100 | - | Detail |
| C2H3g12948 | 3:29,103,982-29,107,722 | + | C1H3g19145 | CX3g028504 | LOC_Os03g55950 | Os03g0769400 | - | Detail |
| C2H3g22257 | 3:29,110,512-29,113,327 | - | C1H3g25186 | CX3g028565 | LOC_Os03g55970 | Os03g0769600 | - | Detail |
| C2H3g01939 | 3:29,130,743-29,131,300 | + | C1H3g09664 | CX3g028075 | LOC_Os03g56010 | Os03g0770000 | - | Detail |
| C2H3g30222 | 3:29,133,381-29,138,555 | + | C1H3g17718 | CX3g030368 | LOC_Os03g56020 | Os03g0826400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |