| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g09128 | 1:35,434,528-35,437,190 | - | C2H1g25003 | CX1g005729 | LOC_Os01g68970 | Os01g0918500 | RYMV2, CPR5-1, OsCPR5-1 | Detail |
| C1H1g18558 | 1:35,442,789-35,445,427 | + | C2H1g11154 | CX1g000425 | LOC_Os01g69010 | Os01g0162101 | - | Detail |
| C1H1g13567 | 1:35,443,910-35,444,239 | - | - | - | - | Os01g0919150 | - | Detail |
| C1H1g21311 | 1:35,445,498-35,445,860 | + | C2H1g17314 | CX1g000425 | LOC_Os01g69010 | Os01g0919100 | OsFRDL4 | Detail |
| C1H1g10942 | 1:35,446,823-35,447,677 | - | C2H1g00829 | CX1g000646 | LOC_Os01g69020 | Os01g0635600 | - | Detail |
| C1H1g17122 | 1:35,450,912-35,456,081 | - | C2H1g17477 | CX1g007071 | LOC_Os01g69030 | Os01g0919400 | SPS1, sps1, OsSPS1, SPS | Detail |
| C1H1g18790 | 1:35,460,721-35,461,157 | - | C2H1g14732 | CX1g001011 | - | - | - | Detail |
| C1H1g24083 | 1:35,463,621-35,466,688 | + | C2H1g17144 | CX1g002654 | LOC_Os01g69040 | Os01g0919500 | - | Detail |
| C1H1g24488 | 1:35,474,947-35,477,848 | + | C2H1g22206 | CX1g001203 | LOC_Os01g69050 | Os01g0919600 | - | Detail |
| C1H1g20104 | 1:35,478,892-35,481,850 | + | C2H1g29537 | CX1g005901 | LOC_Os01g69060 | Os01g0919700 | - | Detail |
| C1H1g05233 | 1:35,486,503-35,488,398 | - | C2H1g27432 | CX1g003243 | LOC_Os01g69070 | Os01g0919800 | - | Detail |
| C1H1g07064 | 1:35,491,976-35,496,202 | - | C2H1g17576 | CX1g004468 | LOC_Os01g69080 | Os01g0919900 | - | Detail |
| C1H1g22004 | 1:35,504,003-35,508,425 | - | C2H1g29795 | CX1g001843 | LOC_Os01g69090 | Os01g0920000 | - | Detail |
| C1H1g22093 | 1:35,525,387-35,527,354 | + | C2H1g14245 | CX1g003295 | LOC_Os01g69100 | Os01g0920100 | - | Detail |
| C1H1g30726 | 1:35,529,181-35,530,766 | - | C2H1g29600 | CX1g000176 | LOC_Os01g69110 | Os01g0920200 | - | Detail |
| C1H1g16048 | 1:35,533,116-35,540,718 | + | C2H1g21628 | CX1g003195 | LOC_Os01g69120 | Os01g0920300 | - | Detail |
| C1H1g14453 | 1:35,540,794-35,548,962 | - | C2H1g17133 | CX1g001019 | LOC_Os01g69130 | Os01g0920400 | - | Detail |
| C1H1g09369 | 1:35,552,913-35,554,611 | + | C2H1g29507 | - | LOC_Os01g69140 | Os01g0920500 | - | Detail |
| C1H1g20161 | 1:35,561,583-35,564,420 | + | C2H1g19096 | - | LOC_Os01g69160 | Os01g0920700 | - | Detail |
| C1H1g02570 | 1:35,570,552-35,571,339 | + | C2H1g02874 | - | LOC_Os01g69174 | Os01g0920800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g26986 | 12:13,868,852-13,872,363 | - | C1H12g01168 | CX12g017787 | LOC_Os12g26940 | Os12g0454800 | CRL4, CHARK, S/T kinase, OsCRL4, OsHKL1, OsCDP | Detail |
| C2H12g26277 | 12:13,877,098-13,877,376 | + | C1H12g10028 | CX12g016039 | - | - | - | Detail |
| C2H12g14469 | 12:13,883,176-13,883,463 | + | - | CX12g015279 | - | - | - | Detail |
| C2H12g20253 | 12:13,923,564-13,926,914 | + | C1H12g23121 | CX12g017975 | LOC_Os12g27060 | Os12g0456100 | - | Detail |
| C2H12g20046 | 12:13,933,284-13,935,699 | - | C1H12g22119 | CX12g016746 | LOC_Os12g27070 | Os12g0456200 | - | Detail |
| C2H12g00613 | 12:13,941,227-13,942,524 | + | C1H12g04965 | CX12g016453 | LOC_Os12g27090 | - | - | Detail |
| C2H12g27509 | 12:13,944,888-13,949,711 | + | C1H12g13521 | CX12g016453 | LOC_Os12g27090 | Os12g0456400 | - | Detail |
| C2H12g10115 | 12:13,959,959-13,960,153 | + | C1H12g25831 | CX12g016959 | LOC_Os12g27190 | Os12g0457200 | - | Detail |
| C2H12g15729 | 12:13,965,338-13,966,053 | - | C1H12g02272 | CX12g018094 | LOC_Os12g27220 | Os12g0458100 | - | Detail |
| C2H12g06376 | 12:13,985,180-13,990,362 | - | C1H12g18821 | CX12g018094 | LOC_Os12g27254 | Os12g0458100 | - | Detail |
| C2H12g20196 | 12:14,039,231-14,041,613 | - | C1H12g15735 | CX12g016893 | LOC_Os12g27350 | Os12g0459100 | - | Detail |
| C2H12g17708 | 12:14,082,641-14,091,586 | + | C1H12g04555 | CX12g017463 | LOC_Os12g26870 | Os12g0539700 | - | Detail |
| C2H12g01706 | 12:14,125,247-14,125,945 | + | C1H12g05201 | CX12g017942 | LOC_Os12g27440 | Os12g0460100 | - | Detail |
| C2H12g06459 | 12:14,164,936-14,165,628 | + | C1H12g24783 | CX12g018706 | LOC_Os12g27470 | Os12g0460400 | - | Detail |
| C2H12g17065 | 12:14,187,297-14,190,636 | - | C1H12g15830 | CX12g016743 | LOC_Os12g27520 | Os12g0460800 | - | Detail |
| C2H12g17820 | 12:14,218,232-14,220,063 | - | - | - | - | - | - | Detail |
| C2H12g15845 | 12:14,293,814-14,294,248 | + | C1H12g21553 | CX12g015222 | - | Os12g0461050 | - | Detail |
| C2H12g06780 | 12:14,337,541-14,338,884 | + | - | CX12g015743 | LOC_Os12g27690 | Os12g0462700 | - | Detail |
| C2H12g13285 | 12:14,354,156-14,355,628 | + | C1H12g17942 | CX12g015075 | LOC_Os12g27760 | Os12g0464300 | - | Detail |
| C2H12g13517 | 12:14,380,631-14,382,019 | + | C1H12g24196 | CX12g015075 | LOC_Os12g27810 | Os12g0464300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |