| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g18737 | 1:35,300,143-35,307,217 | - | C2H1g00528 | CX1g000609 | LOC_Os01g68750 | Os01g0916200 | - | Detail |
| C1H1g30491 | 1:35,307,710-35,313,854 | - | C2H1g02052 | CX1g001348 | LOC_Os01g68760 | Os01g0916300 | - | Detail |
| C1H1g06685 | 1:35,319,225-35,322,573 | + | C2H1g27017 | CX1g001819 | LOC_Os01g68770 | Os01g0916400 | OsSBP | Detail |
| C1H1g20243 | 1:35,326,350-35,327,273 | + | C2H1g28521 | CX1g005784 | LOC_Os01g68790 | Os01g0916600 | - | Detail |
| C1H1g21448 | 1:35,329,355-35,330,050 | + | C2H1g07737 | CX1g002249 | LOC_Os01g68800 | Os01g0916700 | - | Detail |
| C1H1g20060 | 1:35,330,910-35,346,909 | - | C2H1g12507 | CX1g004291 | LOC_Os01g68810 | Os01g0916800 | - | Detail |
| C1H1g21166 | 1:35,352,348-35,353,142 | + | C2H1g20226 | CX1g000375 | LOC_Os01g68820 | Os01g0917100 | - | Detail |
| C1H1g31102 | 1:35,358,857-35,361,432 | + | C2H1g00129 | CX1g006590 | LOC_Os01g68830 | Os01g0917200 | - | Detail |
| C1H1g29362 | 1:35,368,048-35,368,389 | - | C2H1g26434 | - | - | - | - | Detail |
| C1H1g04270 | 1:35,370,699-35,371,168 | - | C2H1g15748 | CX1g006564 | LOC_Os01g68840 | Os01g0917300 | - | Detail |
| C1H1g06240 | 1:35,375,654-35,380,271 | - | C2H1g26076 | CX1g006187 | LOC_Os01g68860 | Os01g0917400 | - | Detail |
| C1H1g11364 | 1:35,383,101-35,383,322 | - | C2H1g19458 | CX1g003010 | LOC_Os01g74450 | Os01g0975900 | - | Detail |
| C1H1g06858 | 1:35,390,149-35,394,033 | + | C2H1g21282 | CX1g000637 | LOC_Os01g68870 | Os01g0917500 | MSP1, Msp1 | Detail |
| C1H1g09821 | 1:35,399,508-35,400,179 | - | C2H1g13207 | CX1g005976 | LOC_Os01g68890 | Os01g0917700 | - | Detail |
| C1H1g23495 | 1:35,412,665-35,413,588 | - | C2H1g16007 | CX1g006084 | LOC_Os01g68900 | Os01g0917900 | - | Detail |
| C1H1g15326 | 1:35,417,485-35,420,972 | - | C2H1g23570 | CX1g000718 | LOC_Os01g68930 | Os01g0918100 | - | Detail |
| C1H1g26418 | 1:35,422,999-35,424,644 | - | C2H1g21641 | CX1g004987 | LOC_Os01g68940 | Os01g0918200 | OsSUMO2 | Detail |
| C1H1g25857 | 1:35,425,548-35,427,644 | - | C2H1g11840 | CX1g001688 | LOC_Os01g68950 | Os01g0918300 | - | Detail |
| C1H1g27724 | 1:35,430,035-35,431,246 | + | C2H1g23989 | - | - | - | - | Detail |
| C1H1g11841 | 1:35,431,547-35,433,325 | + | C2H1g12677 | CX1g006416 | LOC_Os01g68960 | Os01g0918400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g19435 | 4:22,521,930-22,525,097 | + | C1H4g14520 | CX4g031957 | LOC_Os04g44110 | Os04g0521800 | - | Detail |
| C2H4g18486 | 4:22,525,268-22,525,756 | - | - | - | - | Os04g0521900 | - | Detail |
| C2H4g20077 | 4:22,534,017-22,534,349 | + | C1H4g13540 | CX4g034351 | LOC_Os04g44130 | Os04g0522100 | CAL2 | Detail |
| C2H4g17950 | 4:22,544,733-22,545,482 | - | C1H4g14130 | CX4g035905 | LOC_Os04g44150 | Os04g0522500 | GA2ox6, OsGA2ox6 | Detail |
| C2H4g23320 | 4:22,547,687-22,548,330 | - | C1H4g20746 | CX4g035905 | LOC_Os04g44150 | Os04g0522500 | GA2ox6, OsGA2ox6 | Detail |
| C2H4g07715 | 4:22,569,851-22,572,962 | + | C1H4g23550 | CX4g032754 | LOC_Os04g44190 | Os04g0522800 | - | Detail |
| C2H4g09820 | 4:22,574,353-22,575,002 | + | C1H4g25974 | CX4g032876 | LOC_Os04g44200 | Os04g0523000 | - | Detail |
| C2H4g17435 | 4:22,575,109-22,580,142 | - | C1H4g18322 | CX4g032188 | LOC_Os04g44210 | Os04g0523100 | - | Detail |
| C2H4g30482 | 4:22,586,419-22,588,702 | - | C1H4g27685 | CX4g033622 | LOC_Os04g44220 | Os04g0523200 | - | Detail |
| C2H4g08365 | 4:22,590,483-22,590,956 | - | C1H4g26193 | CX4g033622 | LOC_Os04g44220 | Os04g0523350 | - | Detail |
| C2H4g19772 | 4:22,595,491-22,595,874 | - | - | CX4g035364 | - | - | - | Detail |
| C2H4g21642 | 4:22,598,615-22,604,413 | + | C1H4g02749 | CX4g033677 | LOC_Os04g44230 | Os04g0523500 | OsCKX8 | Detail |
| C2H4g25107 | 4:22,607,303-22,608,808 | - | C1H4g16494 | CX4g034590 | LOC_Os04g44240 | Os04g0523600 | - | Detail |
| C2H4g28789 | 4:22,611,650-22,615,059 | - | C1H4g13330 | - | LOC_Os04g51490 | Os04g0132900 | - | Detail |
| C2H4g13084 | 4:22,618,354-22,620,895 | - | C1H4g19013 | CX4g035815 | LOC_Os01g62100 | - | - | Detail |
| C2H4g14631 | 4:22,624,546-22,626,720 | - | C1H4g16494 | CX4g034590 | LOC_Os04g44250 | Os04g0523600 | - | Detail |
| C2H4g00229 | 4:22,627,770-22,628,705 | + | - | - | LOC_Os04g44260 | Os04g0524136 | - | Detail |
| C2H4g21424 | 4:22,634,411-22,635,207 | + | C1H4g20304 | CX4g035143 | LOC_Os04g44280 | Os04g0524300 | RR5, rr5, OsRR5, Rra4, OsRRA4 | Detail |
| C2H4g00588 | 4:22,658,904-22,661,183 | + | C1H4g10194 | CX4g034041 | LOC_Os04g44290 | Os04g0524400 | - | Detail |
| C2H4g16476 | 4:22,662,716-22,666,298 | - | C1H4g06080 | CX4g031624 | LOC_Os04g44300 | Os04g0524500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |