| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g12726 | 1:34,938,831-34,939,619 | + | C2H1g20697 | CX1g003493 | LOC_Os01g67950 | Os01g0907200 | - | Detail |
| C1H1g26541 | 1:34,942,504-34,947,620 | + | C2H1g10610 | CX1g004144 | LOC_Os01g67960 | Os01g0907300 | - | Detail |
| C1H1g18538 | 1:34,948,320-34,955,231 | + | C2H1g19705 | CX1g000822 | LOC_Os01g67970 | Os01g0907400 | JMJ705 | Detail |
| C1H1g19874 | 1:34,956,430-34,957,545 | + | C2H1g29254 | CX1g000036 | LOC_Os01g67980 | Os01g0907600 | OsSAG12-1 | Detail |
| C1H1g08768 | 1:34,972,914-34,976,480 | + | C2H1g19503 | CX1g000912 | LOC_Os01g68000 | Os01g0907900 | PLA2, pla2, pla2(pla2-1, pla2-2), plt2, LHD2 | Detail |
| C1H1g13810 | 1:34,987,033-34,989,975 | - | C2H1g14371 | CX1g000788 | LOC_Os01g68010 | Os01g0908100 | - | Detail |
| C1H1g00934 | 1:34,993,325-34,997,431 | + | C2H1g27794 | CX1g002877 | LOC_Os01g68020 | Os01g0908200 | OsBT | Detail |
| C1H1g26380 | 1:34,998,549-34,999,821 | - | C2H1g06918 | CX1g005492 | LOC_Os01g68030 | Os01g0908400 | - | Detail |
| C1H1g26157 | 1:35,001,120-35,004,353 | - | C2H1g30537 | CX1g002681 | LOC_Os01g68040 | Os01g0908500 | - | Detail |
| C1H1g02663 | 1:35,011,447-35,013,794 | + | C2H1g27819 | CX1g003019 | LOC_Os01g68050 | Os01g0908600 | OsProT1 | Detail |
| C1H1g28238 | 1:35,014,156-35,018,530 | - | C2H1g20684 | CX1g003471 | LOC_Os01g68060 | Os01g0908700 | - | Detail |
| C1H1g12819 | 1:35,026,038-35,027,558 | + | C2H1g22636 | CX1g001370 | LOC_Os01g68070 | Os01g0908800 | - | Detail |
| C1H1g18966 | 1:35,031,109-35,032,479 | - | - | CX1g007120 | LOC_Os01g68090 | Os01g0909000 | - | Detail |
| C1H1g09218 | 1:35,033,587-35,036,812 | + | C2H1g29519 | CX1g001897 | LOC_Os01g68104 | Os01g0909100 | - | Detail |
| C1H1g22460 | 1:35,039,709-35,040,078 | - | C2H1g05938 | - | - | Os01g0909150 | - | Detail |
| C1H1g21604 | 1:35,041,397-35,051,861 | - | C2H1g23470 | CX1g001307 | LOC_Os01g68120 | Os01g0909200 | OsDCL3a | Detail |
| C1H1g09277 | 1:35,055,480-35,055,878 | + | C2H1g03983 | CX1g000844 | LOC_Os01g68130 | - | - | Detail |
| C1H1g24131 | 1:35,056,030-35,059,812 | + | C2H1g03983 | CX1g000844 | LOC_Os01g68130 | Os01g0909300 | - | Detail |
| C1H1g09913 | 1:35,060,666-35,061,631 | - | - | CX1g002611 | LOC_Os01g68140 | Os01g0909400 | - | Detail |
| C1H1g04879 | 1:35,067,984-35,071,444 | + | C2H1g20920 | CX1g003036 | LOC_Os01g68260 | Os01g0971200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g20138 | 4:21,074,128-21,076,094 | - | C1H4g21499 | CX4g034396 | LOC_Os04g41160 | Os04g0488700 | - | Detail |
| C2H4g16331 | 4:21,090,214-21,094,826 | - | C1H4g17621 | CX4g033270 | LOC_Os04g41200 | Os04g0489100 | - | Detail |
| C2H4g30667 | 4:21,097,406-21,098,273 | - | C1H4g14434 | CX4g036668 | - | Os04g0489200 | - | Detail |
| C2H4g29111 | 4:21,103,085-21,112,991 | + | C1H4g13969 | CX4g034720 | LOC_Os04g41229 | Os04g0489600 | OsbHLH111, OsSGI1, HBP1 | Detail |
| C2H4g26329 | 4:21,118,979-21,122,492 | + | C1H4g01937 | CX4g033639 | LOC_Os04g41250 | Os04g0489800 | RHS1 | Detail |
| C2H4g08737 | 4:21,124,232-21,132,233 | + | C1H4g19439 | CX4g032470 | LOC_Os04g41260 | Os04g0490100 | - | Detail |
| C2H4g00670 | 4:21,138,835-21,139,794 | + | C1H4g19266 | - | LOC_Os04g41280 | - | - | Detail |
| C2H4g11492 | 4:21,143,455-21,146,792 | + | C1H4g19266 | CX4g034755 | LOC_Os04g41280 | Os04g0490300 | - | Detail |
| C2H4g26467 | 4:21,147,485-21,149,945 | - | C1H4g25635 | CX4g034054 | LOC_Os04g41300 | Os04g0490400 | - | Detail |
| C2H4g17263 | 4:21,153,742-21,156,513 | + | C1H4g02046 | CX4g036414 | LOC_Os04g41310 | Os04g0490500 | - | Detail |
| C2H4g06465 | 4:21,156,771-21,162,890 | - | C1H4g27608 | CX4g031476 | LOC_Os04g41320 | Os04g0490600 | - | Detail |
| C2H4g14336 | 4:21,171,396-21,173,378 | + | - | CX4g035361 | LOC_Os04g41330 | Os04g0490700 | - | Detail |
| C2H4g18442 | 4:21,173,890-21,176,469 | - | C1H4g22577 | CX4g031967 | LOC_Os04g41340 | Os04g0490800 | OsPGLP1 | Detail |
| C2H4g17626 | 4:21,180,461-21,182,268 | + | C1H4g24056 | CX4g036249 | LOC_Os04g41350 | Os04g0490900 | - | Detail |
| C2H4g02527 | 4:21,187,902-21,190,658 | + | C1H4g30101 | CX4g033718 | LOC_Os04g41380 | Os04g0491100 | - | Detail |
| C2H4g11306 | 4:21,193,349-21,200,488 | - | C1H4g24917 | CX4g035441 | LOC_Os04g41400 | Os04g0491500 | - | Detail |
| C2H4g18826 | 4:21,207,246-21,210,326 | - | C1H4g15315 | CX4g036387 | LOC_Os04g41450 | Os04g0491500 | - | Detail |
| C2H4g07651 | 4:21,211,932-21,216,391 | - | C1H4g21111 | CX4g035327 | LOC_Os04g41460 | Os04g0491700 | OsINT1 | Detail |
| C2H4g12997 | 4:21,223,394-21,230,605 | + | C1H4g17364 | CX4g033387 | LOC_Os04g41470 | Os04g0492100 | - | Detail |
| C2H4g29458 | 4:21,234,162-21,245,817 | + | C1H4g17746 | CX4g034732 | LOC_Os04g41490 | Os04g0492300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |