| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g11165 | 1:34,773,025-34,777,269 | - | C2H1g18397 | CX1g002071 | LOC_Os01g67570 | Os01g0901900 | OsPAP3 | Detail |
| C1H1g07120 | 1:34,778,425-34,784,227 | - | C2H1g27175 | CX1g003005 | LOC_Os01g67580 | Os01g0902100 | - | Detail |
| C1H1g07945 | 1:34,790,251-34,797,298 | + | C2H1g01159 | CX1g002834 | LOC_Os01g67590 | Os01g0902200 | - | Detail |
| C1H1g09859 | 1:34,797,780-34,800,787 | - | C2H1g09953 | CX1g004278 | LOC_Os01g67600 | Os01g0902300 | - | Detail |
| C1H1g10919 | 1:34,805,838-34,809,077 | + | C2H1g21673 | CX1g003173 | LOC_Os01g67630 | Os01g0902700 | - | Detail |
| C1H1g02991 | 1:34,811,665-34,815,094 | + | C2H1g11697 | CX1g000416 | LOC_Os01g67640 | Os01g0902800 | - | Detail |
| C1H1g01517 | 1:34,823,535-34,824,056 | - | C2H1g22514 | CX1g005371 | LOC_Os01g67650 | Os01g0842200 | - | Detail |
| C1H1g12112 | 1:34,836,018-34,841,313 | - | C2H1g29533 | CX1g006854 | LOC_Os01g67720 | Os01g0904200 | - | Detail |
| C1H1g23804 | 1:34,841,658-34,843,649 | + | C2H1g19214 | CX1g003334 | LOC_Os01g67730 | Os01g0904300 | - | Detail |
| C1H1g23062 | 1:34,844,136-34,855,737 | - | C2H1g10276 | CX1g000154 | LOC_Os01g67740 | Os01g0904400 | - | Detail |
| C1H1g02720 | 1:34,856,447-34,861,170 | - | C2H1g16992 | CX1g001313 | LOC_Os01g67750 | Os01g0904500 | - | Detail |
| C1H1g03400 | 1:34,863,899-34,867,437 | - | C2H1g05837 | CX1g004760 | LOC_Os01g67770 | Os01g0904700 | RR26, OsRR26, Rrb6, Orr6, OsRR16, OsRRB6 | Detail |
| C1H1g01129 | 1:34,879,834-34,882,041 | + | C2H1g29165 | CX1g000275 | LOC_Os01g67810 | Os01g0905200 | - | Detail |
| C1H1g31042 | 1:34,883,497-34,885,551 | + | C2H1g16521 | CX1g001652 | LOC_Os01g67820 | Os01g0905300 | - | Detail |
| C1H1g11384 | 1:34,887,397-34,890,680 | - | C2H1g29056 | CX1g000161 | LOC_Os01g67830 | Os01g0905400 | - | Detail |
| C1H1g03018 | 1:34,898,864-34,901,431 | + | C2H1g13823 | CX1g004783 | LOC_Os01g67850 | Os01g0905700 | - | Detail |
| C1H1g11811 | 1:34,902,974-34,905,313 | - | C2H1g10330 | CX1g001709 | LOC_Os01g67860 | Os01g0905800 | - | Detail |
| C1H1g06073 | 1:34,908,202-34,913,331 | - | C2H1g06722 | CX1g001709 | LOC_Os01g67870 | Os01g0906000 | - | Detail |
| C1H1g19357 | 1:34,917,371-34,926,277 | - | C2H1g09299 | CX1g002463 | LOC_Os01g67880 | Os01g0906200 | - | Detail |
| C1H1g19297 | 1:34,929,626-34,935,695 | - | C2H1g18200 | CX1g003860 | LOC_Os01g67920 | Os01g0906600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g29547 | 1:16,832,878-16,835,248 | - | C1H1g16518 | CX1g002333 | LOC_Os01g32780 | Os01g0511100 | OsUSP5 | Detail |
| C2H1g25988 | 1:16,837,023-16,840,169 | - | C1H1g30895 | CX1g000349 | LOC_Os01g32790 | Os01g0511200 | - | Detail |
| C2H1g01415 | 1:16,841,809-16,845,294 | - | C1H1g00873 | CX1g005541 | LOC_Os01g32800 | Os01g0511300 | OsRpn9a | Detail |
| C2H1g19462 | 1:16,860,843-16,864,257 | - | C1H1g16898 | CX1g003225 | LOC_Os01g32830 | Os01g0511600 | OsPLGG1 | Detail |
| C2H1g19337 | 1:16,899,183-16,907,044 | + | C1H1g25757 | CX1g003635 | LOC_Os01g32870 | Os01g0512100 | - | Detail |
| C2H1g17681 | 1:16,931,308-16,932,258 | + | C1H1g18492 | - | - | - | - | Detail |
| C2H1g17712 | 1:16,932,896-16,933,223 | + | C1H1g25480 | CX1g001290 | LOC_Os01g32900 | - | - | Detail |
| C2H1g03966 | 1:16,940,050-16,940,761 | + | C1H1g22771 | CX1g001290 | LOC_Os01g32920 | Os01g0512700 | - | Detail |
| C2H1g26017 | 1:16,943,373-16,944,112 | + | C1H1g27769 | CX1g001406 | LOC_Os01g32930 | Os01g0512800 | - | Detail |
| C2H1g24494 | 1:16,947,960-16,955,382 | - | C1H1g02880 | CX1g004321 | LOC_Os01g32964 | Os01g0513100 | - | Detail |
| C2H1g05942 | 1:16,965,438-16,973,952 | - | C1H1g13876 | CX1g004574 | LOC_Os01g32980 | Os01g0513200 | - | Detail |
| C2H1g28038 | 1:16,982,263-16,985,606 | + | C1H1g02604 | CX1g003028 | LOC_Os01g33000 | Os01g0513400 | - | Detail |
| C2H1g27810 | 1:16,991,444-16,993,467 | - | C1H1g22987 | CX1g006725 | LOC_Os01g33020 | Os01g0513700 | - | Detail |
| C2H1g12307 | 1:16,995,193-16,997,326 | - | C1H1g30759 | CX1g007248 | LOC_Os01g33030 | Os01g0513800 | - | Detail |
| C2H1g12454 | 1:17,015,225-17,021,837 | + | C1H1g09298 | CX1g000923 | LOC_Os01g33040 | Os01g0513900 | - | Detail |
| C2H1g17423 | 1:17,025,427-17,027,932 | - | C1H1g02667 | CX1g002054 | LOC_Os01g33050 | Os01g0514000 | - | Detail |
| C2H1g15853 | 1:17,028,304-17,038,183 | + | C1H1g14994 | CX1g000762 | LOC_Os01g33060 | Os01g0514300 | - | Detail |
| C2H1g02122 | 1:17,041,019-17,043,235 | + | C1H1g01968 | CX1g002835 | LOC_Os01g33070 | Os01g0514450 | - | Detail |
| C2H1g28988 | 1:17,052,789-17,059,255 | + | C1H1g23037 | CX1g003510 | LOC_Os01g33080 | Os01g0514600 | - | Detail |
| C2H1g05248 | 1:17,067,099-17,070,330 | + | C1H1g14522 | CX1g002745 | LOC_Os01g33090 | Os01g0514700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |