| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g11165 | 1:34,773,025-34,777,269 | - | C2H1g18397 | CX1g002071 | LOC_Os01g67570 | Os01g0901900 | OsPAP3 | Detail |
| C1H1g07120 | 1:34,778,425-34,784,227 | - | C2H1g27175 | CX1g003005 | LOC_Os01g67580 | Os01g0902100 | - | Detail |
| C1H1g07945 | 1:34,790,251-34,797,298 | + | C2H1g01159 | CX1g002834 | LOC_Os01g67590 | Os01g0902200 | - | Detail |
| C1H1g09859 | 1:34,797,780-34,800,787 | - | C2H1g09953 | CX1g004278 | LOC_Os01g67600 | Os01g0902300 | - | Detail |
| C1H1g10919 | 1:34,805,838-34,809,077 | + | C2H1g21673 | CX1g003173 | LOC_Os01g67630 | Os01g0902700 | - | Detail |
| C1H1g02991 | 1:34,811,665-34,815,094 | + | C2H1g11697 | CX1g000416 | LOC_Os01g67640 | Os01g0902800 | - | Detail |
| C1H1g01517 | 1:34,823,535-34,824,056 | - | C2H1g22514 | CX1g005371 | LOC_Os01g67650 | Os01g0842200 | - | Detail |
| C1H1g12112 | 1:34,836,018-34,841,313 | - | C2H1g29533 | CX1g006854 | LOC_Os01g67720 | Os01g0904200 | - | Detail |
| C1H1g23804 | 1:34,841,658-34,843,649 | + | C2H1g19214 | CX1g003334 | LOC_Os01g67730 | Os01g0904300 | - | Detail |
| C1H1g23062 | 1:34,844,136-34,855,737 | - | C2H1g10276 | CX1g000154 | LOC_Os01g67740 | Os01g0904400 | - | Detail |
| C1H1g02720 | 1:34,856,447-34,861,170 | - | C2H1g16992 | CX1g001313 | LOC_Os01g67750 | Os01g0904500 | - | Detail |
| C1H1g03400 | 1:34,863,899-34,867,437 | - | C2H1g05837 | CX1g004760 | LOC_Os01g67770 | Os01g0904700 | RR26, OsRR26, Rrb6, Orr6, OsRR16, OsRRB6 | Detail |
| C1H1g01129 | 1:34,879,834-34,882,041 | + | C2H1g29165 | CX1g000275 | LOC_Os01g67810 | Os01g0905200 | - | Detail |
| C1H1g31042 | 1:34,883,497-34,885,551 | + | C2H1g16521 | CX1g001652 | LOC_Os01g67820 | Os01g0905300 | - | Detail |
| C1H1g11384 | 1:34,887,397-34,890,680 | - | C2H1g29056 | CX1g000161 | LOC_Os01g67830 | Os01g0905400 | - | Detail |
| C1H1g03018 | 1:34,898,864-34,901,431 | + | C2H1g13823 | CX1g004783 | LOC_Os01g67850 | Os01g0905700 | - | Detail |
| C1H1g11811 | 1:34,902,974-34,905,313 | - | C2H1g10330 | CX1g001709 | LOC_Os01g67860 | Os01g0905800 | - | Detail |
| C1H1g06073 | 1:34,908,202-34,913,331 | - | C2H1g06722 | CX1g001709 | LOC_Os01g67870 | Os01g0906000 | - | Detail |
| C1H1g19357 | 1:34,917,371-34,926,277 | - | C2H1g09299 | CX1g002463 | LOC_Os01g67880 | Os01g0906200 | - | Detail |
| C1H1g19297 | 1:34,929,626-34,935,695 | - | C2H1g18200 | CX1g003860 | LOC_Os01g67920 | Os01g0906600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g06127 | 3:32,303,571-32,307,779 | + | C1H3g24850 | CX3g027527 | LOC_Os03g62610 | Os03g0843200 | - | Detail |
| C2H3g01988 | 3:32,308,000-32,310,432 | - | C1H3g01007 | CX3g028344 | LOC_Os03g62620 | Os03g0843300 | - | Detail |
| C2H3g11755 | 3:32,310,721-32,312,657 | + | C1H3g21046 | CX3g025686 | LOC_Os03g62630 | Os03g0843400 | - | Detail |
| C2H3g01237 | 3:32,312,684-32,318,650 | - | C1H3g08743 | CX3g027867 | LOC_Os03g62640 | Os03g0843500 | - | Detail |
| C2H3g27702 | 3:32,319,596-32,327,026 | + | C1H3g28947 | CX3g030484 | LOC_Os03g62650 | Os03g0843600 | Os-CASTOR | Detail |
| C2H3g20877 | 3:32,328,441-32,332,474 | + | C1H3g22971 | CX3g029476 | LOC_Os03g62660 | Os03g0843700 | - | Detail |
| C2H3g21220 | 3:32,333,202-32,335,124 | + | C1H3g08128 | CX3g026603 | LOC_Os03g62670 | Os03g0843800 | OsHOL1 | Detail |
| C2H3g22425 | 3:32,335,748-32,339,201 | - | C1H3g30449 | CX3g027789 | LOC_Os03g62680 | Os03g0843900 | - | Detail |
| C2H3g21394 | 3:32,339,558-32,341,447 | + | C1H3g17557 | CX3g027520 | LOC_Os03g62690 | Os03g0844000 | - | Detail |
| C2H3g22805 | 3:32,345,973-32,351,479 | - | C1H3g24479 | CX3g026619 | LOC_Os03g62700 | Os03g0844100 | - | Detail |
| C2H3g19054 | 3:32,353,748-32,357,223 | + | C1H3g13171 | CX3g029702 | LOC_Os03g62720 | Os03g0844450 | - | Detail |
| C2H3g29284 | 3:32,358,635-32,363,299 | + | C1H3g03440 | CX3g030518 | LOC_Os03g62730 | Os03g0844500 | - | Detail |
| C2H3g07021 | 3:32,363,365-32,366,530 | - | C1H3g17919 | CX3g026392 | LOC_Os03g62740 | Os03g0844600 | - | Detail |
| C2H3g14850 | 3:32,370,593-32,376,702 | + | C1H3g09189 | CX3g027621 | LOC_Os03g62750 | Os03g0844700 | - | Detail |
| C2H3g09934 | 3:32,380,276-32,383,178 | - | C1H3g04796 | CX3g027114 | LOC_Os03g62780 | Os03g0844900 | - | Detail |
| C2H3g04637 | 3:32,383,797-32,385,237 | - | C1H3g08823 | CX3g027041 | LOC_Os03g62790 | Os03g0845000 | - | Detail |
| C2H3g26108 | 3:32,386,554-32,389,563 | - | C1H3g29234 | CX3g030975 | LOC_Os03g62830 | Os03g0845300 | - | Detail |
| C2H3g24255 | 3:32,390,402-32,390,950 | + | C1H3g31847 | CX3g025947 | LOC_Os03g62840 | - | - | Detail |
| C2H3g26469 | 3:32,391,795-32,400,675 | - | C1H3g01054 | CX3g027086 | LOC_Os03g62850 | Os03g0845500 | - | Detail |
| C2H3g09183 | 3:32,401,489-32,403,759 | - | C1H3g13526 | CX3g030387 | LOC_Os03g62860 | Os03g0845600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |