| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g11165 | 1:34,773,025-34,777,269 | - | C2H1g18397 | CX1g002071 | LOC_Os01g67570 | Os01g0901900 | OsPAP3 | Detail |
| C1H1g07120 | 1:34,778,425-34,784,227 | - | C2H1g27175 | CX1g003005 | LOC_Os01g67580 | Os01g0902100 | - | Detail |
| C1H1g07945 | 1:34,790,251-34,797,298 | + | C2H1g01159 | CX1g002834 | LOC_Os01g67590 | Os01g0902200 | - | Detail |
| C1H1g09859 | 1:34,797,780-34,800,787 | - | C2H1g09953 | CX1g004278 | LOC_Os01g67600 | Os01g0902300 | - | Detail |
| C1H1g10919 | 1:34,805,838-34,809,077 | + | C2H1g21673 | CX1g003173 | LOC_Os01g67630 | Os01g0902700 | - | Detail |
| C1H1g02991 | 1:34,811,665-34,815,094 | + | C2H1g11697 | CX1g000416 | LOC_Os01g67640 | Os01g0902800 | - | Detail |
| C1H1g01517 | 1:34,823,535-34,824,056 | - | C2H1g22514 | CX1g005371 | LOC_Os01g67650 | Os01g0842200 | - | Detail |
| C1H1g12112 | 1:34,836,018-34,841,313 | - | C2H1g29533 | CX1g006854 | LOC_Os01g67720 | Os01g0904200 | - | Detail |
| C1H1g23804 | 1:34,841,658-34,843,649 | + | C2H1g19214 | CX1g003334 | LOC_Os01g67730 | Os01g0904300 | - | Detail |
| C1H1g23062 | 1:34,844,136-34,855,737 | - | C2H1g10276 | CX1g000154 | LOC_Os01g67740 | Os01g0904400 | - | Detail |
| C1H1g02720 | 1:34,856,447-34,861,170 | - | C2H1g16992 | CX1g001313 | LOC_Os01g67750 | Os01g0904500 | - | Detail |
| C1H1g03400 | 1:34,863,899-34,867,437 | - | C2H1g05837 | CX1g004760 | LOC_Os01g67770 | Os01g0904700 | RR26, OsRR26, Rrb6, Orr6, OsRR16, OsRRB6 | Detail |
| C1H1g01129 | 1:34,879,834-34,882,041 | + | C2H1g29165 | CX1g000275 | LOC_Os01g67810 | Os01g0905200 | - | Detail |
| C1H1g31042 | 1:34,883,497-34,885,551 | + | C2H1g16521 | CX1g001652 | LOC_Os01g67820 | Os01g0905300 | - | Detail |
| C1H1g11384 | 1:34,887,397-34,890,680 | - | C2H1g29056 | CX1g000161 | LOC_Os01g67830 | Os01g0905400 | - | Detail |
| C1H1g03018 | 1:34,898,864-34,901,431 | + | C2H1g13823 | CX1g004783 | LOC_Os01g67850 | Os01g0905700 | - | Detail |
| C1H1g11811 | 1:34,902,974-34,905,313 | - | C2H1g10330 | CX1g001709 | LOC_Os01g67860 | Os01g0905800 | - | Detail |
| C1H1g06073 | 1:34,908,202-34,913,331 | - | C2H1g06722 | CX1g001709 | LOC_Os01g67870 | Os01g0906000 | - | Detail |
| C1H1g19357 | 1:34,917,371-34,926,277 | - | C2H1g09299 | CX1g002463 | LOC_Os01g67880 | Os01g0906200 | - | Detail |
| C1H1g19297 | 1:34,929,626-34,935,695 | - | C2H1g18200 | CX1g003860 | LOC_Os01g67920 | Os01g0906600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g21950 | 1:5,156,758-5,157,543 | + | C1H1g18999 | CX1g000352 | LOC_Os01g10970 | Os01g0207900 | - | Detail |
| C2H1g18529 | 1:5,160,262-5,161,059 | + | C1H1g20276 | CX1g000352 | LOC_Os01g10970 | Os01g0207700 | - | Detail |
| C2H1g21935 | 1:5,168,402-5,169,870 | + | C1H1g26781 | CX1g005883 | LOC_Os01g10980 | Os01g0207900 | - | Detail |
| C2H1g29674 | 1:5,174,437-5,175,988 | + | C1H1g25464 | CX1g005883 | LOC_Os01g10990 | Os01g0208000 | - | Detail |
| C2H1g12071 | 1:5,186,164-5,186,724 | + | C1H1g11853 | CX1g000352 | LOC_Os01g10980 | Os01g0207900 | - | Detail |
| C2H1g11638 | 1:5,192,462-5,194,292 | - | C1H1g01947 | CX1g006210 | LOC_Os01g11010 | Os01g0208400 | - | Detail |
| C2H1g19708 | 1:5,203,767-5,211,532 | + | C1H1g28948 | CX1g005878 | LOC_Os01g11040 | Os01g0208600 | - | Detail |
| C2H1g22516 | 1:5,212,892-5,217,652 | + | C1H1g05716 | CX1g006828 | LOC_Os01g11054 | Os01g0208700 | Osppc4 | Detail |
| C2H1g01505 | 1:5,218,131-5,223,233 | + | C1H1g21624 | CX1g004331 | LOC_Os01g11070 | Os01g0209000 | - | Detail |
| C2H1g10245 | 1:5,227,727-5,231,459 | + | C1H1g24219 | CX1g001114 | LOC_Os01g11110 | Os01g0209200 | - | Detail |
| C2H1g07094 | 1:5,231,618-5,236,545 | - | C1H1g03677 | CX1g001003 | LOC_Os01g11120 | Os01g0209400 | - | Detail |
| C2H1g19634 | 1:5,242,085-5,249,423 | - | C1H1g12202 | CX1g000194 | LOC_Os01g11130 | Os01g0209500 | - | Detail |
| C2H1g00003 | 1:5,261,349-5,262,402 | - | C1H1g22199 | CX1g004422 | LOC_Os01g11150 | Os01g0209700 | GA2ox7 | Detail |
| C2H1g07361 | 1:5,264,392-5,264,793 | - | C1H1g22199 | CX1g004422 | LOC_Os01g11150 | Os01g0209700 | GA2ox7 | Detail |
| C2H1g04035 | 1:5,276,105-5,278,402 | - | C1H1g04985 | CX1g004758 | LOC_Os01g11160 | Os01g0209800 | - | Detail |
| C2H1g14710 | 1:5,282,482-5,282,839 | + | - | - | - | Os11g0146950 | - | Detail |
| C2H1g16459 | 1:5,288,709-5,289,299 | - | C1H1g14003 | CX1g006771 | LOC_Os01g11200 | Os01g0210200 | - | Detail |
| C2H1g10978 | 1:5,297,332-5,298,543 | + | C1H1g27615 | CX1g001982 | LOC_Os01g11210 | Os01g0210300 | - | Detail |
| C2H1g29549 | 1:5,298,821-5,300,947 | - | C1H1g05366 | CX1g004173 | LOC_Os01g11220 | Os01g0210400 | OsTOD1 | Detail |
| C2H1g12111 | 1:5,301,923-5,302,737 | - | C1H1g22960 | CX1g001527 | LOC_Os01g11230 | Os01g0210500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |