| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g22691 | 1:34,456,509-34,460,624 | - | C2H1g22365 | CX1g004536 | LOC_Os01g67054 | Os01g0895600 | OsCRT3 | Detail |
| C1H1g01482 | 1:34,464,777-34,468,844 | + | C2H1g22375 | CX1g002713 | LOC_Os01g67090 | Os01g0896200 | - | Detail |
| C1H1g30893 | 1:34,471,820-34,476,686 | + | C2H1g04575 | CX1g001546 | LOC_Os01g67100 | Os01g0896300 | FSM | Detail |
| C1H1g26029 | 1:34,477,243-34,477,743 | - | C2H1g25928 | CX1g003492 | LOC_Os01g67110 | Os01g0896400 | - | Detail |
| C1H1g29763 | 1:34,478,733-34,484,724 | - | C2H1g14182 | CX1g000252 | LOC_Os01g67120 | Os01g0896500 | - | Detail |
| C1H1g30911 | 1:34,486,842-34,489,651 | + | C2H1g29299 | CX1g000222 | LOC_Os01g67134 | Os01g0896700 | - | Detail |
| C1H1g14713 | 1:34,490,702-34,494,529 | + | C2H1g29299 | CX1g005697 | LOC_Os01g67134 | Os01g0896700 | - | Detail |
| C1H1g19882 | 1:34,500,130-34,503,341 | - | C2H1g23719 | CX1g003038 | LOC_Os01g67160 | Os01g0897000 | OsCDKB1;1 | Detail |
| C1H1g17352 | 1:34,505,169-34,508,379 | + | C2H1g07378 | CX1g002421 | LOC_Os01g67170 | Os01g0897100 | - | Detail |
| C1H1g14594 | 1:34,509,224-34,512,105 | - | C2H1g16084 | CX1g007222 | LOC_Os01g67180 | Os01g0897200 | - | Detail |
| C1H1g18893 | 1:34,512,827-34,515,752 | - | C2H1g21261 | CX1g007222 | LOC_Os01g67190 | Os01g0897300 | - | Detail |
| C1H1g28282 | 1:34,520,833-34,522,530 | + | C2H1g12363 | CX1g003511 | LOC_Os01g67210 | Os01g0897500 | - | Detail |
| C1H1g13480 | 1:34,524,739-34,529,904 | + | C2H1g08138 | CX1g005094 | LOC_Os01g67220 | Os01g0897600 | Os1βGlu4 | Detail |
| C1H1g21764 | 1:34,531,329-34,531,583 | + | C2H1g01827 | - | - | Os08g0170400 | - | Detail |
| C1H1g31716 | 1:34,534,765-34,538,902 | - | C2H1g28742 | CX1g001233 | LOC_Os01g67240 | Os01g0897700 | OsFH1 | Detail |
| C1H1g23647 | 1:34,547,395-34,557,451 | - | C2H1g17165 | CX1g000742 | LOC_Os01g67250 | Os01g0897800 | - | Detail |
| C1H1g27730 | 1:34,583,009-34,589,566 | - | C2H1g12889 | CX1g005478 | LOC_Os01g67290 | Os01g0898300 | - | Detail |
| C1H1g09687 | 1:34,595,503-34,597,053 | + | C2H1g09014 | CX1g002008 | LOC_Os01g67300 | Os01g0898400 | - | Detail |
| C1H1g23893 | 1:34,598,027-34,600,168 | + | C2H1g04830 | CX1g006649 | LOC_Os01g67310 | Os01g0898500 | - | Detail |
| C1H1g03088 | 1:34,601,798-34,604,084 | - | C2H1g01136 | CX1g000739 | LOC_Os01g67314 | Os01g0898600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g26745 | 9:17,426,590-17,428,151 | + | C1H9g13766 | CX9g055830 | LOC_Os09g35830 | Os09g0527100 | - | Detail |
| C2H9g10324 | 9:17,436,093-17,439,429 | + | C1H9g13766 | CX9g055265 | LOC_Os09g35850 | Os09g0527500 | - | Detail |
| C2H9g01691 | 9:17,443,794-17,445,384 | + | C1H9g07362 | CX9g055927 | LOC_Os09g35860 | Os09g0527600 | - | Detail |
| C2H9g08969 | 9:17,448,493-17,449,274 | - | C1H9g25049 | CX9g056672 | LOC_Os09g35870 | Os09g0527700 | - | Detail |
| C2H9g07509 | 9:17,453,053-17,456,008 | - | C1H9g07553 | CX9g055267 | LOC_Os09g35880 | Os09g0527900 | - | Detail |
| C2H9g28114 | 9:17,461,813-17,465,864 | + | C1H9g01949 | CX9g055134 | LOC_Os09g35890 | Os09g0528000 | - | Detail |
| C2H9g04300 | 9:17,477,350-17,478,193 | + | C1H9g05805 | CX9g055268 | LOC_Os09g35910 | Os09g0528200 | - | Detail |
| C2H9g16123 | 9:17,481,815-17,484,032 | - | C1H9g07637 | CX9g055503 | LOC_Os09g35920 | Os09g0528300 | - | Detail |
| C2H9g26896 | 9:17,495,146-17,497,057 | + | C1H9g29475 | CX9g055183 | LOC_Os09g35940 | Os09g0528700 | - | Detail |
| C2H9g28773 | 9:17,523,780-17,528,824 | - | C1H9g30526 | CX9g055032 | LOC_Os09g35960 | Os09g0528800 | - | Detail |
| C2H9g02120 | 9:17,532,544-17,535,528 | - | C1H9g28769 | CX9g056476 | LOC_Os09g35970 | Os09g0529100 | - | Detail |
| C2H9g25877 | 9:17,538,389-17,546,069 | - | C1H9g03629 | CX9g055769 | LOC_Os09g35980 | Os09g0529300 | SPK, Spk(t), Spk, OsTAC1, TAC1, qTAC9 | Detail |
| C2H9g23489 | 9:17,546,316-17,549,213 | - | C1H9g19525 | CX9g056579 | LOC_Os09g36000 | Os09g0529400 | - | Detail |
| C2H9g27445 | 9:17,549,627-17,553,215 | - | C1H9g27128 | CX9g056877 | LOC_Os09g36020 | Os09g0529700 | OsVPS22 | Detail |
| C2H9g23825 | 9:17,555,063-17,558,905 | + | C1H9g05809 | CX9g055906 | LOC_Os09g36040 | Os09g0530000 | - | Detail |
| C2H9g28583 | 9:17,566,927-17,570,294 | + | C1H9g07466 | CX9g056800 | LOC_Os09g36060 | Os09g0530200 | - | Detail |
| C2H9g03363 | 9:17,570,757-17,573,848 | + | C1H9g12433 | CX9g057922 | LOC_Os09g36070 | Os09g0530275 | - | Detail |
| C2H9g23341 | 9:17,581,105-17,582,729 | + | C1H9g17904 | CX9g056469 | LOC_Os09g36080 | Os09g0530300 | - | Detail |
| C2H9g22638 | 9:17,584,226-17,593,186 | + | C1H9g17327 | CX9g057701 | LOC_Os09g36090 | Os09g0530500 | - | Detail |
| C2H9g01014 | 9:17,593,927-17,596,071 | + | C1H9g09404 | CX9g055918 | LOC_Os09g36100 | Os09g0530700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |