| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g01042 | 1:34,338,931-34,341,643 | - | C2H1g20029 | CX1g002940 | LOC_Os01g66830 | Os01g0892600 | - | Detail |
| C1H1g06654 | 1:34,345,542-34,349,072 | - | C2H1g11302 | CX1g002940 | LOC_Os01g66840 | Os01g0892500 | - | Detail |
| C1H1g31640 | 1:34,352,400-34,356,620 | - | C2H1g01693 | CX1g002940 | LOC_Os01g66850 | Os01g0892600 | - | Detail |
| C1H1g09901 | 1:34,358,445-34,360,912 | - | C2H1g22619 | CX1g002940 | LOC_Os01g66850 | Os01g0892600 | - | Detail |
| C1H1g09629 | 1:34,365,943-34,366,552 | - | C2H1g24345 | CX1g002940 | LOC_Os01g66850 | Os01g0892600 | - | Detail |
| C1H1g20700 | 1:34,370,360-34,374,273 | + | C2H1g05403 | CX1g006441 | LOC_Os01g66860 | Os01g0892800 | - | Detail |
| C1H1g19705 | 1:34,386,544-34,388,494 | + | C2H1g12836 | CX1g003394 | LOC_Os01g66890 | Os01g0893400 | - | Detail |
| C1H1g01188 | 1:34,391,632-34,392,393 | - | C2H1g26872 | CX1g001996 | LOC_Os01g66900 | Os01g0895200 | - | Detail |
| C1H1g17433 | 1:34,395,687-34,396,191 | - | C2H1g12267 | CX1g001996 | LOC_Os01g66910 | Os01g0893700 | - | Detail |
| C1H1g27447 | 1:34,402,806-34,403,323 | - | C2H1g08390 | CX1g004421 | - | - | - | Detail |
| C1H1g30439 | 1:34,405,065-34,408,867 | + | C2H1g29880 | CX1g001005 | LOC_Os01g66920 | Os01g0894000 | - | Detail |
| C1H1g12515 | 1:34,411,760-34,414,399 | - | C2H1g06719 | CX1g003625 | LOC_Os01g66940 | Os01g0894300 | - | Detail |
| C1H1g10154 | 1:34,418,003-34,420,043 | + | C2H1g21200 | CX1g002052 | LOC_Os01g66960 | Os01g0894500 | - | Detail |
| C1H1g26928 | 1:34,421,572-34,424,097 | - | C2H1g25022 | CX1g006885 | LOC_Os01g66970 | Os01g0894600 | - | Detail |
| C1H1g16084 | 1:34,427,235-34,429,346 | - | - | CX1g004652 | LOC_Os01g66980 | Os01g0894700 | - | Detail |
| C1H1g00116 | 1:34,435,346-34,435,567 | - | - | - | LOC_Os01g66990 | Os01g0895000 | - | Detail |
| C1H1g16957 | 1:34,437,029-34,441,488 | - | C2H1g00638 | CX1g001151 | LOC_Os01g67000 | Os01g0895100 | - | Detail |
| C1H1g02433 | 1:34,442,515-34,444,309 | + | C2H1g18438 | CX1g006213 | LOC_Os01g67010 | Os01g0895200 | - | Detail |
| C1H1g06118 | 1:34,450,631-34,452,309 | + | C2H1g11785 | CX1g003616 | LOC_Os01g67030 | Os01g0895300 | - | Detail |
| C1H1g18682 | 1:34,454,954-34,455,775 | + | C2H1g08497 | - | LOC_Os01g67040 | Os01g0895500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g18962 | 5:12,540,821-12,542,672 | - | C1H5g00809 | CX5g037533 | LOC_Os05g25560 | Os05g0319900 | - | Detail |
| C2H5g16379 | 5:12,560,833-12,561,348 | + | C1H5g07771 | CX5g040926 | LOC_Os05g25600 | - | - | Detail |
| C2H5g17208 | 5:12,564,172-12,565,033 | + | C1H5g18434 | CX5g040614 | LOC_Os05g25620 | Os05g0320500 | - | Detail |
| C2H5g12884 | 5:12,571,540-12,575,563 | - | C1H5g29408 | CX5g040663 | LOC_Os05g25640 | Os05g0320700 | OsC4HL | Detail |
| C2H5g23272 | 5:12,622,131-12,622,888 | + | C1H5g31853 | CX5g039065 | - | Os05g0321900 | - | Detail |
| C2H5g30247 | 5:12,623,482-12,626,593 | + | C1H5g21190 | CX5g039065 | LOC_Os05g25770 | Os05g0321900 | - | Detail |
| C2H5g20457 | 5:12,642,054-12,643,214 | + | C1H5g09562 | CX5g039731 | LOC_Os05g25770 | Os05g0322900 | - | Detail |
| C2H5g00966 | 5:12,649,272-12,652,168 | + | C1H5g20684 | CX5g037483 | LOC_Os05g25780 | Os05g0323100 | - | Detail |
| C2H5g05199 | 5:12,658,867-12,659,098 | - | - | CX5g040463 | - | - | - | Detail |
| C2H5g12832 | 5:12,659,126-12,659,341 | - | C1H5g15138 | CX5g037550 | LOC_Os05g25784 | Os05g0323400 | - | Detail |
| C2H5g27944 | 5:12,666,481-12,670,358 | + | C1H5g03510 | - | - | - | - | Detail |
| C2H5g23193 | 5:12,666,616-12,670,222 | - | C1H5g02171 | CX5g037938 | LOC_Os05g25320 | Os05g0475600 | - | Detail |
| C2H5g25840 | 5:12,682,852-12,686,503 | + | C1H5g07569 | CX5g038231 | LOC_Os05g25840 | Os05g0323800 | - | Detail |
| C2H5g02562 | 5:12,687,807-12,692,024 | + | C1H5g09336 | CX5g039355 | LOC_Os05g25850 | Os05g0323900 | SODA1, SodA1, Mn-SOD, Mn- SOD, OsMSD, OsMSD1 | Detail |
| C2H5g29319 | 5:12,693,761-12,695,203 | + | C1H5g18365 | CX5g038450 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| C2H5g21674 | 5:12,722,634-12,724,518 | + | C1H5g16408 | CX5g037596 | LOC_Os05g25170 | - | - | Detail |
| C2H5g11879 | 5:12,724,950-12,726,343 | + | C1H5g24963 | CX5g039314 | LOC_Os05g25170 | - | - | Detail |
| C2H5g22294 | 5:12,730,462-12,732,138 | + | C1H5g19700 | CX5g038330 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| C2H5g05113 | 5:12,732,485-12,735,940 | - | C1H5g26142 | CX5g040251 | LOC_Os05g25880 | Os05g0324200 | - | Detail |
| C2H5g27623 | 5:12,768,072-12,770,998 | - | C1H5g16305 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |