| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g03465 | 1:33,925,968-33,932,096 | + | C2H1g05908 | CX1g004350 | LOC_Os01g65986 | Os01g0882400 | - | Detail |
| C1H1g00623 | 1:33,932,318-33,933,271 | - | C2H1g09811 | CX1g004839 | LOC_Os01g66000 | Os01g0882500 | - | Detail |
| C1H1g12565 | 1:33,935,301-33,938,373 | - | C2H1g26075 | CX1g001863 | LOC_Os01g66010 | Os01g0882800 | OsAAP8 | Detail |
| C1H1g06649 | 1:33,942,178-33,944,112 | + | C2H1g21282 | CX1g003084 | LOC_Os01g66020 | Os01g0883000 | - | Detail |
| C1H1g27902 | 1:33,944,778-33,946,860 | - | C2H1g11503 | CX1g000214 | LOC_Os01g66030 | Os01g0883100 | OsMADS2 | Detail |
| C1H1g29165 | 1:33,949,084-33,955,843 | + | C2H1g08965 | CX1g004776 | LOC_Os01g66050 | Os01g0883200 | - | Detail |
| C1H1g17858 | 1:33,967,397-33,967,924 | + | C2H1g04719 | CX1g000593 | LOC_Os01g66070 | Os01g0883400 | - | Detail |
| C1H1g04579 | 1:33,989,125-33,992,241 | + | C2H1g18953 | CX1g004921 | LOC_Os01g66100 | Os01g0883800 | 20ox2, C20OX2, GA20, GA20ox-2, Os20ox2, OsGA20ox-2, OsGA20ox2, SD1, SD1-in, SD1-ja, Sd-1, d47, d49, sd-1, sd1, "sd1 (d47, sd1-d, sd1-1)", sd1-1, sd1-2, sd1-3, sd1-4 | Detail |
| C1H1g11499 | 1:33,993,131-33,998,717 | - | C2H1g12762 | CX1g004480 | LOC_Os01g66110 | Os01g0883900 | - | Detail |
| C1H1g00819 | 1:34,007,330-34,009,110 | - | C2H1g26289 | CX1g006945 | LOC_Os01g66120 | Os01g0884300 | OsNAC6 | Detail |
| C1H1g22008 | 1:34,011,640-34,021,664 | + | C2H1g15992 | CX1g000207 | LOC_Os01g66130 | Os01g0884400 | OsPUB16, OsPIE3 | Detail |
| C1H1g14405 | 1:34,021,792-34,033,195 | - | C2H1g16552 | CX1g001201 | LOC_Os01g66140 | Os01g0884500 | - | Detail |
| C1H1g17014 | 1:34,036,736-34,037,656 | - | C2H1g27234 | CX1g001119 | - | - | - | Detail |
| C1H1g08290 | 1:34,042,347-34,044,193 | - | C2H1g20664 | CX1g001844 | LOC_Os01g66150 | Os01g0884700 | - | Detail |
| C1H1g07105 | 1:34,046,254-34,047,810 | + | C2H1g19237 | CX1g005283 | LOC_Os01g66160 | Os01g0884800 | - | Detail |
| C1H1g15937 | 1:34,048,050-34,051,340 | - | C2H1g27259 | CX1g006373 | LOC_Os01g66170 | Os01g0884900 | - | Detail |
| C1H1g27873 | 1:34,052,322-34,054,243 | + | C2H1g17695 | CX1g005687 | LOC_Os01g66180 | Os01g0885000 | - | Detail |
| C1H1g01709 | 1:34,056,791-34,057,984 | - | - | CX1g002386 | LOC_Os01g66190 | Os01g0885200 | - | Detail |
| C1H1g19782 | 1:34,061,702-34,067,363 | - | C2H1g03917 | CX1g002733 | LOC_Os01g66200 | Os01g0885300 | - | Detail |
| C1H1g04510 | 1:34,077,032-34,077,985 | - | C2H1g15479 | CX1g006568 | LOC_Os01g66230 | Os01g0885500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g26175 | 6:20,288,103-20,289,893 | - | - | CX6g045956 | - | - | - | Detail |
| C2H6g05392 | 6:20,292,019-20,294,140 | - | C1H1g18862 | CX6g041336 | LOC_Os06g38920 | Os06g0597250 | - | Detail |
| C2H6g07810 | 6:20,307,460-20,309,267 | - | C1H6g04658 | CX6g043426 | LOC_Os06g38940 | Os06g0588900 | - | Detail |
| C2H6g26491 | 6:20,313,712-20,321,159 | - | C1H6g22807 | CX6g041801 | LOC_Os06g38950 | Os06g0589300 | - | Detail |
| C2H6g01085 | 6:20,327,347-20,330,077 | + | C1H6g22963 | CX6g045459 | LOC_Os06g38960 | Os06g0589500 | - | Detail |
| C2H6g26129 | 6:20,339,579-20,344,237 | + | C1H6g29875 | CX6g044412 | LOC_Os06g38970 | Os06g0589600 | OsCLV2d | Detail |
| C2H6g29605 | 6:20,344,608-20,348,902 | - | C1H6g12291 | CX6g044301 | LOC_Os06g38980 | Os06g0589700 | - | Detail |
| C2H6g04608 | 6:20,356,233-20,359,883 | - | C1H6g16874 | CX6g043811 | LOC_Os06g38990 | Os06g0589800 | - | Detail |
| C2H6g09250 | 6:20,387,056-20,389,851 | + | C1H6g02457 | CX6g044162 | LOC_Os06g39040 | Os06g0590301 | - | Detail |
| C2H6g01220 | 6:20,390,836-20,391,860 | + | C1H6g18661 | CX6g044162 | LOC_Os06g39050 | Os06g0590500 | - | Detail |
| C2H6g13063 | 6:20,393,035-20,394,583 | - | C1H6g17915 | CX6g045879 | LOC_Os06g39060 | Os06g0590600 | - | Detail |
| C2H6g08659 | 6:20,398,036-20,399,493 | + | C1H6g07537 | CX6g042981 | LOC_Os06g39070 | Os06g0590700 | - | Detail |
| C2H6g14589 | 6:20,414,247-20,414,805 | + | C1H6g02882 | CX6g044462 | LOC_Os06g39110 | Os06g0591200 | - | Detail |
| C2H6g08620 | 6:20,419,694-20,420,414 | + | C1H6g09925 | CX6g044799 | LOC_Os06g39110 | Os06g0591400 | - | Detail |
| C2H6g30590 | 6:20,426,755-20,428,876 | - | C1H6g25168 | CX6g041575 | LOC_Os06g39140 | Os06g0591600 | - | Detail |
| C2H6g12055 | 6:20,437,146-20,442,906 | + | C1H6g23316 | CX6g042070 | LOC_Os06g39230 | Os06g0592400 | - | Detail |
| C2H6g28454 | 6:20,453,757-20,456,709 | + | C1H6g28903 | CX6g043758 | LOC_Os06g39260 | Os06g0593100 | OsUGT4 | Detail |
| C2H6g22269 | 6:20,457,923-20,459,581 | + | - | - | - | - | - | Detail |
| C2H6g29951 | 6:20,461,062-20,462,555 | + | C1H6g12394 | CX6g043683 | LOC_Os06g39270 | Os06g0593200 | - | Detail |
| C2H6g21482 | 6:20,479,140-20,486,182 | + | C1H6g30256 | CX6g043392 | LOC_Os06g39344 | Os06g0594100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |