| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g01060 | 1:33,229,555-33,231,475 | + | C2H1g28759 | CX1g004395 | LOC_Os01g64750 | Os01g0867600 | - | Detail |
| C1H1g05827 | 1:33,232,645-33,239,006 | + | C2H1g28759 | CX1g004395 | LOC_Os01g64750 | Os01g0867600 | - | Detail |
| C1H1g05655 | 1:33,239,740-33,242,023 | + | C2H1g15067 | CX1g001594 | LOC_Os01g64760 | Os01g0867700 | - | Detail |
| C1H1g18522 | 1:33,243,518-33,247,182 | + | C2H1g28339 | CX1g006145 | LOC_Os01g64770 | Os01g0867800 | OsPTB1 | Detail |
| C1H1g30751 | 1:33,247,478-33,250,816 | - | C2H1g30207 | CX1g001130 | LOC_Os01g64780 | Os01g0867900 | - | Detail |
| C1H1g06977 | 1:33,252,925-33,255,455 | - | C2H1g00754 | CX1g003660 | LOC_Os01g64790 | Os01g0868000 | ERF99, OsEREBP2, EREBP2, OsERF#099, OsERF099, OsERF99, AP2/EREBP#080, AP2/EREBP80 | Detail |
| C1H1g15696 | 1:33,276,560-33,281,262 | - | C2H1g16482 | CX1g001548 | LOC_Os01g64810 | Os01g0868200 | - | Detail |
| C1H1g06751 | 1:33,284,709-33,294,966 | - | C2H1g13803 | CX1g000694 | LOC_Os01g64820 | Os01g0868300 | - | Detail |
| C1H1g19072 | 1:33,298,865-33,299,481 | - | - | - | - | - | - | Detail |
| C1H1g05607 | 1:33,301,255-33,302,712 | + | C2H1g19050 | CX1g005471 | LOC_Os01g64840 | Os01g0868600 | - | Detail |
| C1H1g26609 | 1:33,305,254-33,307,527 | + | C2H1g17354 | CX1g000216 | LOC_Os01g64850 | Os01g0868800 | - | Detail |
| C1H1g03086 | 1:33,310,024-33,312,294 | + | C2H1g27055 | CX1g007065 | LOC_Os01g64860 | Os01g0868900 | - | Detail |
| C1H1g21599 | 1:33,313,672-33,319,803 | - | C2H1g17173 | CX1g007144 | LOC_Os01g64870 | Os01g0869000 | - | Detail |
| C1H1g30307 | 1:33,320,978-33,323,357 | + | C2H1g09905 | CX1g007080 | LOC_Os01g64890 | Os01g0869200 | OsMGT1, OsMRS2-2 | Detail |
| C1H1g30705 | 1:33,323,921-33,328,815 | - | C2H1g24941 | CX1g002156 | LOC_Os01g64900 | Os01g0869300 | - | Detail |
| C1H1g03661 | 1:33,330,416-33,338,022 | - | C2H1g06937 | CX1g002156 | LOC_Os01g64900 | - | - | Detail |
| C1H1g15596 | 1:33,338,916-33,340,370 | - | C2H1g09241 | CX1g003337 | LOC_Os01g64910 | Os01g0869400 | - | Detail |
| C1H1g25047 | 1:33,342,831-33,345,247 | - | C2H1g30680 | CX1g002614 | LOC_Os01g64920 | Os01g0869500 | - | Detail |
| C1H1g19257 | 1:33,346,677-33,349,188 | + | C2H1g14315 | CX1g001436 | LOC_Os01g64930 | Os01g0869600 | - | Detail |
| C1H1g00245 | 1:33,350,586-33,353,154 | + | C2H1g12747 | CX1g002829 | LOC_Os01g64960 | Os01g0869800 | PSBS1, OsPsbS1, PsbS1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g30176 | 5:17,978,195-17,981,429 | - | C1H5g21927 | CX5g041041 | LOC_Os05g36050 | Os05g0436100 | - | Detail |
| C2H5g25140 | 5:17,989,571-17,996,570 | + | - | - | - | - | - | Detail |
| C2H5g24518 | 5:18,002,396-18,006,364 | + | C1H5g00945 | CX5g038521 | LOC_Os05g36090 | Os05g0436900 | - | Detail |
| C2H5g25424 | 5:18,017,653-18,018,589 | + | C1H5g20450 | - | LOC_Os05g36100 | Os05g0437050 | - | Detail |
| C2H5g23889 | 5:18,021,296-18,023,014 | + | C1H5g30900 | CX5g038881 | LOC_Os05g36100 | Os05g0437100 | - | Detail |
| C2H5g26705 | 5:18,024,751-18,028,715 | + | C1H5g13619 | CX5g040437 | LOC_Os05g36110 | Os05g0437200 | - | Detail |
| C2H5g01872 | 5:18,029,322-18,034,987 | - | C1H5g30746 | CX5g038248 | LOC_Os05g36120 | Os05g0437300 | OsPTB2 | Detail |
| C2H5g07160 | 5:18,039,217-18,039,669 | - | C1H5g30728 | CX5g037089 | LOC_Os05g36140 | Os05g0437401 | - | Detail |
| C2H5g23446 | 5:18,041,448-18,044,559 | - | C1H5g12364 | CX5g040008 | LOC_Os05g36150 | Os05g0437500 | - | Detail |
| C2H5g27422 | 5:18,045,358-18,048,526 | + | C1H5g21578 | CX5g038670 | LOC_Os05g36160 | Os05g0437700 | - | Detail |
| C2H5g25843 | 5:18,057,263-18,057,484 | + | - | CX5g039734 | - | - | - | Detail |
| C2H5g29490 | 5:18,060,794-18,063,653 | - | C1H5g27479 | CX5g036909 | LOC_Os05g36190 | Os05g0437900 | - | Detail |
| C2H5g16485 | 5:18,072,664-18,074,311 | + | C1H5g31814 | CX5g037659 | LOC_Os05g36260 | Os05g0438500 | - | Detail |
| C2H5g12266 | 5:18,074,807-18,077,582 | - | C1H5g00387 | CX5g036739 | LOC_Os05g36270 | Os05g0438600 | OscFBP2 | Detail |
| C2H5g20770 | 5:18,079,894-18,081,521 | - | C1H5g01011 | CX5g040190 | LOC_Os05g36280 | Os05g0489800 | OsCENH3 | Detail |
| C2H5g27716 | 5:18,082,195-18,085,472 | - | C1H5g30330 | CX5g040511 | LOC_Os05g36290 | Os05g0438800 | - | Detail |
| C2H5g12466 | 5:18,096,477-18,097,130 | - | C1H5g26379 | CX5g038867 | LOC_Os05g36310 | Os05g0439000 | - | Detail |
| C2H5g14391 | 5:18,102,650-18,104,314 | - | C1H5g16929 | CX5g039078 | LOC_Os05g36350 | Os05g0439300 | - | Detail |
| C2H5g04868 | 5:18,110,066-18,111,424 | + | C1H5g23246 | CX5g039474 | LOC_Os05g36360 | Os05g0439400 | PUB44, OsPUB44 | Detail |
| C2H5g08231 | 5:18,114,128-18,114,526 | - | C1H5g11953 | CX5g037862 | LOC_Os05g36380 | Os05g0439750 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |