| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g21861 | 1:32,584,401-32,588,189 | + | C2H1g03435 | CX1g004784 | LOC_Os01g63420 | Os01g0853400 | OsCOI1a, OsCOI1, Os_F0728 | Detail |
| C1H1g01084 | 1:32,595,967-32,596,413 | + | C2H1g21411 | CX1g005287 | - | - | - | Detail |
| C1H1g22221 | 1:32,598,743-32,600,421 | - | C2H1g02642 | CX1g001449 | LOC_Os01g63460 | Os01g0853700 | - | Detail |
| C1H1g01372 | 1:32,605,722-32,606,705 | + | - | CX1g000120 | LOC_Os01g63470 | Os01g0853800 | - | Detail |
| C1H1g16925 | 1:32,626,638-32,628,089 | + | C2H1g23760 | CX1g000832 | LOC_Os01g63480 | Os01g0854000 | - | Detail |
| C1H1g13840 | 1:32,637,580-32,637,996 | + | - | CX1g007164 | LOC_Os01g63500 | Os01g0854400 | - | Detail |
| C1H1g30766 | 1:32,643,690-32,644,390 | - | C2H1g15087 | CX1g000677 | LOC_Os01g63510 | Os01g0854500 | QHB | Detail |
| C1H1g14296 | 1:32,652,785-32,654,422 | + | C2H1g13017 | CX1g004974 | LOC_Os01g63540 | Os01g0854800 | OsCYP86A9 | Detail |
| C1H1g06653 | 1:32,656,012-32,659,317 | - | C2H1g11964 | CX1g000343 | LOC_Os01g63580 | Os01g0855000 | - | Detail |
| C1H1g12873 | 1:32,677,253-32,679,894 | + | C2H1g27825 | CX1g005974 | LOC_Os01g63620 | Os01g0855200 | - | Detail |
| C1H1g14003 | 1:32,694,266-32,696,395 | + | C2H1g08166 | CX1g003617 | LOC_Os01g63680 | Os01g0855400 | Os2R_MYB17 | Detail |
| C1H1g30734 | 1:32,699,757-32,701,181 | - | - | CX1g004624 | LOC_Os01g63690 | Os01g0855600 | - | Detail |
| C1H1g14553 | 1:32,707,902-32,711,602 | + | C2H1g04964 | CX1g004920 | LOC_Os01g63710 | Os01g0856000 | - | Detail |
| C1H1g19008 | 1:32,740,280-32,746,644 | + | C2H1g15998 | CX1g001894 | LOC_Os01g63770 | Os01g0856500 | - | Detail |
| C1H1g09781 | 1:32,748,069-32,755,499 | - | C2H1g00745 | CX1g000142 | LOC_Os01g63780 | Os01g0856600 | - | Detail |
| C1H1g00466 | 1:32,757,991-32,758,467 | + | C2H5g12625 | CX1g001837 | LOC_Os01g63800 | Os01g0856800 | - | Detail |
| C1H1g21752 | 1:32,761,915-32,763,335 | + | C2H1g08502 | CX1g000133 | LOC_Os01g63810 | Os01g0856900 | SBDCP1 | Detail |
| C1H1g03217 | 1:32,763,720-32,771,691 | - | C2H1g12263 | CX1g007132 | LOC_Os01g63820 | Os01g0857000 | - | Detail |
| C1H1g17452 | 1:32,774,455-32,775,804 | - | C2H1g17962 | CX1g006058 | LOC_Os01g63830 | Os01g0857200 | - | Detail |
| C1H1g18078 | 1:32,777,706-32,781,386 | - | C2H1g17753 | CX1g002484 | LOC_Os01g63840 | Os01g0857300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g24619 | 12:17,928,699-17,933,845 | + | C1H12g11343 | CX12g015274 | LOC_Os12g44230 | Os12g0639600 | - | Detail |
| C2H12g25374 | 12:17,935,341-17,936,947 | + | C1H12g12527 | CX12g015274 | LOC_Os12g35060 | - | - | Detail |
| C2H12g07734 | 12:17,940,139-17,945,460 | + | C1H12g11343 | CX12g015274 | LOC_Os12g44230 | Os12g0639600 | - | Detail |
| C2H12g29827 | 12:17,962,037-17,967,917 | + | C1H12g11343 | CX12g015274 | LOC_Os12g44230 | Os12g0639600 | - | Detail |
| C2H12g20928 | 12:17,969,602-17,970,310 | - | C1H12g18294 | CX12g016304 | LOC_Os12g35070 | Os12g0536300 | - | Detail |
| C2H12g00043 | 12:17,974,041-17,974,341 | - | - | - | - | - | - | Detail |
| C2H12g01442 | 12:17,978,373-17,980,105 | - | C1H12g20216 | CX12g018295 | LOC_Os12g35270 | Os12g0538100 | - | Detail |
| C2H12g28133 | 12:17,980,478-17,981,143 | + | - | - | LOC_Os12g35280 | - | - | Detail |
| C2H12g08195 | 12:18,009,283-18,014,687 | + | C1H12g14258 | CX12g016180 | LOC_Os12g35290 | Os12g0538300 | - | Detail |
| C2H12g18808 | 12:18,027,103-18,030,611 | + | C1H12g01248 | CX12g016218 | LOC_Os12g35320 | Os12g0538500 | OsSDEL1, SDEL1 | Detail |
| C2H12g22588 | 12:18,039,756-18,040,067 | + | C1H12g09399 | CX12g016937 | LOC_Os12g35330 | Os12g0538600 | - | Detail |
| C2H12g06405 | 12:18,047,525-18,051,371 | - | C1H12g25862 | - | - | - | - | Detail |
| C2H12g24646 | 12:18,053,088-18,053,402 | + | C1H12g08152 | CX12g018516 | LOC_Os12g35340 | Os12g0538700 | - | Detail |
| C2H12g06117 | 12:18,054,576-18,055,855 | - | C1H12g10069 | - | - | - | - | Detail |
| C2H12g08485 | 12:18,061,971-18,063,038 | + | - | - | - | - | - | Detail |
| C2H12g13849 | 12:18,065,745-18,071,563 | + | C1H12g11332 | CX12g015103 | LOC_Os12g35350 | Os12g0538800 | - | Detail |
| C2H12g24582 | 12:18,071,724-18,078,683 | - | C1H12g06541 | CX12g015271 | LOC_Os12g35360 | Os12g0538900 | - | Detail |
| C2H12g05766 | 12:18,083,130-18,083,837 | + | C1H12g19258 | - | LOC_Os12g35480 | Os12g0540000 | - | Detail |
| C2H12g05658 | 12:18,089,272-18,090,039 | + | C1H12g07194 | CX12g017572 | LOC_Os12g35480 | Os12g0540000 | - | Detail |
| C2H12g10874 | 12:18,093,000-18,094,831 | - | C1H12g21432 | CX12g018350 | LOC_Os01g53760 | Os12g0133800 | OsPIN1d | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |