| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g06998 | 1:32,452,109-32,455,157 | + | C2H1g19322 | CX1g003917 | LOC_Os01g66930 | Os01g0894100 | - | Detail |
| C1H1g23462 | 1:32,460,067-32,461,514 | - | C2H1g01083 | CX1g005718 | LOC_Os01g63160 | Os01g0850400 | Os2R_MYB16 | Detail |
| C1H1g18988 | 1:32,464,136-32,466,214 | + | C2H1g00932 | CX1g006436 | LOC_Os01g58160 | Os07g0631500 | - | Detail |
| C1H1g23249 | 1:32,466,625-32,470,519 | + | C2H1g11865 | CX1g004614 | LOC_Os01g63180 | Os01g0850550 | - | Detail |
| C1H1g07266 | 1:32,472,257-32,477,058 | + | C2H1g24131 | CX1g004614 | LOC_Os01g63190 | Os01g0850800 | - | Detail |
| C1H1g27965 | 1:32,481,790-32,484,166 | + | C2H1g10947 | CX1g005774 | LOC_Os01g63200 | Os01g0850800 | - | Detail |
| C1H1g10620 | 1:32,485,162-32,485,812 | + | C2H1g04750 | CX1g003037 | LOC_Os01g63210 | Os01g0850900 | - | Detail |
| C1H1g24327 | 1:32,486,382-32,492,236 | + | C2H1g14118 | CX1g006965 | LOC_Os01g63220 | Os01g0851000 | WLP2, OsFLN1 | Detail |
| C1H1g16353 | 1:32,489,033-32,493,715 | - | C2H1g23902 | CX1g000066 | LOC_Os01g63230 | Os01g0851100 | - | Detail |
| C1H1g19302 | 1:32,497,617-32,499,689 | - | C2H1g01345 | CX1g003216 | LOC_Os01g63240 | Os01g0851300 | - | Detail |
| C1H1g13651 | 1:32,502,459-32,506,568 | - | C2H1g07756 | CX1g000616 | LOC_Os01g63250 | Os01g0851400 | - | Detail |
| C1H1g24777 | 1:32,514,001-32,514,819 | + | C2H1g00511 | CX1g001829 | LOC_Os01g63260 | Os01g0851600 | - | Detail |
| C1H1g15673 | 1:32,516,974-32,523,259 | - | C2H1g20633 | CX1g001220 | LOC_Os01g63270 | Os01g0851700 | - | Detail |
| C1H1g03471 | 1:32,529,294-32,532,358 | - | C2H1g02734 | CX1g001145 | LOC_Os01g63280 | Os01g0601200 | - | Detail |
| C1H1g05192 | 1:32,532,894-32,536,711 | - | C2H1g20941 | CX1g001502 | LOC_Os01g63290 | Os01g0852200 | OsPHT4;3 | Detail |
| C1H1g11391 | 1:32,547,025-32,548,971 | - | - | CX1g000657 | LOC_Os01g63310 | Os01g0852400 | OsOPL1 | Detail |
| C1H1g31702 | 1:32,557,085-32,563,376 | - | C2H1g02458 | CX1g006459 | LOC_Os01g63354 | Os01g0852500 | - | Detail |
| C1H1g31372 | 1:32,569,064-32,571,175 | + | C2H1g22636 | CX1g005825 | LOC_Os01g63400 | Os01g0852900 | - | Detail |
| C1H1g22680 | 1:32,572,411-32,573,464 | - | C2H1g00294 | CX1g001333 | LOC_Os01g63410 | Os01g0853000 | - | Detail |
| C1H1g18063 | 1:32,575,063-32,575,404 | + | - | CX1g006014 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g01731 | 6:22,938,721-22,951,042 | + | C1H6g20754 | CX6g045240 | LOC_Os06g43760 | Os06g0645400 | - | Detail |
| C2H6g19060 | 6:22,958,758-22,962,340 | - | C1H6g28289 | CX6g044887 | LOC_Os06g43780 | Os06g0645600 | - | Detail |
| C2H6g03809 | 6:22,963,538-22,977,258 | - | C1H6g09143 | CX6g044295 | LOC_Os06g43790 | Os06g0645700 | - | Detail |
| C2H6g16896 | 6:22,978,375-22,980,930 | - | C1H6g02577 | CX6g042731 | LOC_Os06g43800 | Os06g0646000 | - | Detail |
| C2H6g00144 | 6:23,007,540-23,013,374 | + | C1H6g04976 | CX6g042688 | LOC_Os06g43840 | Os06g0646400 | - | Detail |
| C2H6g05559 | 6:23,017,922-23,020,338 | + | C1H6g25984 | CX6g045272 | LOC_Os06g43850 | Os06g0646500 | - | Detail |
| C2H6g16940 | 6:23,021,857-23,024,477 | - | C1H6g26077 | CX6g045626 | LOC_Os06g43860 | Os06g0646600 | HOS59, HOS59S | Detail |
| C2H6g02597 | 6:23,031,532-23,035,222 | - | C1H6g19436 | CX6g045351 | LOC_Os06g43870 | - | - | Detail |
| C2H6g24337 | 6:23,045,473-23,048,768 | - | C1H6g29846 | CX6g042928 | LOC_Os06g43880 | Os06g0646900 | OsHGGT | Detail |
| C2H6g29125 | 6:23,052,328-23,054,115 | + | C1H6g00877 | CX6g042487 | LOC_Os06g43900 | Os06g0647100 | - | Detail |
| C2H6g13204 | 6:23,060,189-23,064,493 | + | C1H6g08065 | CX6g041230 | LOC_Os06g43910 | Os06g0647200 | ORR5, ORR5, Orr5, OsRR25, Rrb3, OsRR21, OsRRB3 | Detail |
| C2H6g09236 | 6:23,064,769-23,070,371 | - | C1H6g31723 | CX6g041258 | LOC_Os06g43930 | Os06g0647400 | - | Detail |
| C2H6g29946 | 6:23,099,382-23,101,931 | - | C1H6g19263 | CX6g043868 | LOC_Os06g43980 | - | - | Detail |
| C2H6g15797 | 6:23,105,916-23,107,291 | - | C1H6g04314 | CX6g041862 | LOC_Os06g43990 | Os06g0648500 | - | Detail |
| C2H6g19123 | 6:23,116,876-23,119,310 | + | C1H6g02827 | CX6g043505 | - | Os06g0531600 | - | Detail |
| C2H6g25130 | 6:23,126,596-23,127,989 | - | C1H6g19092 | CX6g041428 | LOC_Os06g44010 | Os06g0649000 | WRKY28, WRKY GENE 28 | Detail |
| C2H6g09048 | 6:23,143,335-23,152,171 | + | C1H6g01999 | CX6g042578 | LOC_Os06g44030 | Os06g0649500 | - | Detail |
| C2H6g02564 | 6:23,178,530-23,182,815 | + | C1H6g07514 | CX6g041592 | LOC_Os06g44040 | Os06g0649700 | - | Detail |
| C2H6g25962 | 6:23,185,002-23,187,647 | - | C1H6g08177 | CX6g042762 | LOC_Os06g44050 | Os06g0649800 | Sdt97 | Detail |
| C2H6g16416 | 6:23,191,220-23,196,018 | - | C1H6g22257 | CX6g041956 | LOC_Os06g44060 | Os06g0649900 | spPLD | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |