| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g16879 | 1:32,148,827-32,155,447 | + | C2H1g16142 | CX1g005275 | LOC_Os01g62570 | Os01g0843300 | - | Detail |
| C1H1g19251 | 1:32,157,846-32,158,127 | + | - | CX1g002374 | LOC_Os01g62584 | Os01g0843700 | - | Detail |
| C1H1g11813 | 1:32,162,086-32,164,874 | + | C2H1g29809 | CX1g005906 | LOC_Os01g62600 | Os01g0843800 | - | Detail |
| C1H1g25830 | 1:32,174,337-32,174,561 | + | C2H1g13361 | CX1g003075 | LOC_Os01g62605 | Os01g0844200 | - | Detail |
| C1H1g04507 | 1:32,177,632-32,178,716 | + | C2H1g06815 | CX1g003486 | LOC_Os01g62610 | Os01g0844300 | OsFKBP20-1b | Detail |
| C1H1g01125 | 1:32,179,441-32,183,821 | - | C2H1g25771 | CX1g003345 | LOC_Os01g62620 | Os01g0844400 | - | Detail |
| C1H1g11283 | 1:32,190,789-32,192,102 | - | C2H1g19050 | CX1g006812 | LOC_Os01g62630 | Os01g0844500 | - | Detail |
| C1H1g20147 | 1:32,199,248-32,199,776 | + | C2H1g22722 | - | - | - | - | Detail |
| C1H1g15244 | 1:32,201,457-32,202,164 | - | C2H1g06104 | CX1g005614 | LOC_Os01g62640 | Os01g0844700 | - | Detail |
| C1H1g08181 | 1:32,209,117-32,216,534 | + | C2H1g26004 | CX1g005061 | LOC_Os01g62650 | Os01g0844800 | - | Detail |
| C1H1g15700 | 1:32,217,397-32,218,155 | + | C2H1g05837 | CX1g000371 | LOC_Os01g62660 | Os01g0844900 | - | Detail |
| C1H1g21791 | 1:32,226,274-32,227,689 | - | C2H1g05655 | CX1g003528 | LOC_Os01g62670 | Os01g0845100 | - | Detail |
| C1H1g19830 | 1:32,241,830-32,243,842 | + | C2H1g26466 | CX1g004761 | LOC_Os01g62760 | Os01g0846300 | - | Detail |
| C1H1g10954 | 1:32,245,039-32,245,251 | + | C2H1g02239 | CX1g001759 | LOC_Os01g62770 | Os01g0846400 | - | Detail |
| C1H1g22173 | 1:32,251,112-32,264,453 | + | C2H1g17015 | CX1g003923 | LOC_Os01g62790 | Os01g0846500 | - | Detail |
| C1H1g30030 | 1:32,266,842-32,272,798 | - | C2H1g07497 | CX1g002085 | LOC_Os01g62800 | Os01g0846600 | - | Detail |
| C1H1g20533 | 1:32,273,867-32,282,694 | - | C2H1g09826 | - | - | - | - | Detail |
| C1H1g13164 | 1:32,286,577-32,291,606 | + | C2H1g05456 | CX1g004720 | LOC_Os01g62810 | Os01g0846800 | - | Detail |
| C1H1g18933 | 1:32,292,314-32,297,084 | - | C2H1g21397 | CX1g004243 | LOC_Os01g62820 | Os01g0846900 | - | Detail |
| C1H1g14655 | 1:32,299,175-32,299,435 | + | C2H5g17856 | CX1g001707 | LOC_Os01g62830 | Os01g0847100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g13421 | 2:30,379,410-30,380,372 | - | - | CX2g024909 | LOC_Os02g54450 | Os02g0785700 | - | Detail |
| C2H2g10345 | 2:30,381,783-30,382,312 | + | - | - | LOC_Os05g25680 | Os05g0321600 | - | Detail |
| C2H2g09400 | 2:30,384,038-30,384,562 | + | C1H2g22630 | CX2g022096 | LOC_Os02g54470 | Os02g0785800 | - | Detail |
| C2H2g24301 | 2:30,386,825-30,395,048 | + | C1H2g16607 | CX2g021693 | LOC_Os02g54490 | Os02g0785900 | - | Detail |
| C2H2g16599 | 2:30,396,428-30,404,789 | + | C1H2g04640 | CX2g024703 | LOC_Os02g54500 | Os02g0786000 | - | Detail |
| C2H2g21668 | 2:30,410,106-30,416,388 | + | C1H2g14270 | CX2g019009 | LOC_Os02g54510 | Os02g0786200 | - | Detail |
| C2H2g02803 | 2:30,424,686-30,428,199 | + | C1H2g29436 | CX2g024716 | LOC_Os02g54520 | Os02g0786400 | OsMYB36b | Detail |
| C2H2g17562 | 2:30,429,198-30,429,737 | + | C1H2g24406 | CX2g020901 | LOC_Os02g54530 | Os02g0786500 | - | Detail |
| C2H2g10089 | 2:30,433,843-30,434,364 | + | C1H2g01457 | CX2g020901 | LOC_Os02g54540 | Os02g0786500 | - | Detail |
| C2H2g17982 | 2:30,440,204-30,440,821 | + | C1H2g01457 | CX2g020771 | LOC_Os02g54560 | Os02g0786900 | - | Detail |
| C2H2g09660 | 2:30,441,711-30,442,247 | - | C1H2g13395 | CX2g023717 | LOC_Os02g54570 | Os02g0787000 | - | Detail |
| C2H2g14363 | 2:30,443,501-30,446,969 | + | C1H2g05721 | CX2g022090 | LOC_Os02g54580 | Os02g0787100 | - | Detail |
| C2H2g24176 | 2:30,447,856-30,448,053 | + | C1H2g17039 | CX2g022088 | LOC_Os02g54590 | Os02g0787200 | - | Detail |
| C2H2g27576 | 2:30,448,155-30,450,195 | + | C1H2g17039 | CX2g022088 | LOC_Os02g54590 | Os02g0787200 | - | Detail |
| C2H2g16691 | 2:30,450,311-30,451,725 | + | C1H2g17039 | CX2g022088 | LOC_Os02g54590 | Os02g0787200 | - | Detail |
| C2H2g16242 | 2:30,455,425-30,456,528 | - | C1H2g05581 | CX2g019876 | LOC_Os02g54600 | Os02g0787300 | SMG1, OsMKK4, MKK4, OsMKK4/SMG1 | Detail |
| C2H2g29050 | 2:30,480,799-30,485,502 | + | C1H2g05584 | CX2g023310 | LOC_Os02g54624 | Os02g0787500 | - | Detail |
| C2H2g29172 | 2:30,490,033-30,490,416 | + | C1H2g08821 | CX2g020275 | - | - | - | Detail |
| C2H2g09069 | 2:30,495,779-30,501,939 | + | C1H2g10849 | CX2g019134 | LOC_Os02g54640 | Os02g0787600 | - | Detail |
| C2H2g02130 | 2:30,503,464-30,510,511 | - | C1H2g10467 | CX2g020090 | LOC_Os02g54650 | Os02g0787800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |