| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g20143 | 1:31,987,794-31,990,960 | + | C2H1g09224 | CX1g000114 | LOC_Os01g62290 | Os01g0840100 | cHsp70-1 | Detail |
| C1H1g19514 | 1:31,992,421-31,993,980 | - | C2H1g21773 | CX1g000325 | LOC_Os01g62300 | Os01g0840200 | - | Detail |
| C1H1g29893 | 1:32,007,669-32,008,127 | - | C2H1g18215 | CX1g001065 | LOC_Os01g62310 | - | - | Detail |
| C1H1g00377 | 1:32,008,788-32,009,901 | - | C2H1g27558 | CX1g001065 | LOC_Os01g62310 | Os01g0840300 | - | Detail |
| C1H1g17139 | 1:32,017,474-32,019,413 | - | C2H1g18392 | CX1g004150 | LOC_Os01g62350 | Os01g0840700 | - | Detail |
| C1H1g12130 | 1:32,025,615-32,026,759 | + | C2H1g21625 | CX1g003133 | LOC_Os01g62370 | Os01g0841000 | - | Detail |
| C1H1g21585 | 1:32,032,310-32,033,584 | - | C2H1g05303 | CX1g001868 | LOC_Os01g62380 | Os01g0841100 | - | Detail |
| C1H1g08278 | 1:32,036,050-32,040,980 | - | C2H1g18206 | CX1g005410 | LOC_Os01g62390 | Os01g0841200 | - | Detail |
| C1H1g27442 | 1:32,048,806-32,054,280 | + | C2H1g01645 | CX1g006283 | LOC_Os01g62410 | Os01g0841500 | OsMYB3R-2, OsMYB3R2, MYB3R2 | Detail |
| C1H1g29013 | 1:32,054,965-32,057,733 | + | C2H1g14112 | CX1g001946 | LOC_Os01g62420 | Os01g0841600 | OscTPI | Detail |
| C1H1g20425 | 1:32,062,521-32,063,627 | + | C2H1g22797 | CX1g000812 | LOC_Os01g62430 | Os01g0841700 | OsERG1, OsERG1a, Rpp17-1 | Detail |
| C1H1g09787 | 1:32,064,224-32,071,896 | - | C2H1g16312 | CX1g005408 | LOC_Os01g62440 | Os01g0841800 | - | Detail |
| C1H1g04968 | 1:32,084,495-32,087,400 | + | C2H1g22514 | CX1g003735 | LOC_Os01g62460 | Os01g0842200 | - | Detail |
| C1H1g14751 | 1:32,092,309-32,095,261 | - | C2H1g04788 | CX1g004737 | LOC_Os01g62480 | Os01g0842400 | - | Detail |
| C1H1g07793 | 1:32,103,798-32,106,521 | - | C2H1g08845 | CX1g005658 | LOC_Os01g62490 | Os01g0842500 | - | Detail |
| C1H1g12370 | 1:32,108,857-32,114,415 | - | C2H1g06756 | CX1g000259 | LOC_Os01g62500 | Os01g0842600 | - | Detail |
| C1H1g05990 | 1:32,115,188-32,115,835 | - | C2H1g03150 | CX1g006004 | LOC_Os01g62510 | Os01g0972800 | - | Detail |
| C1H1g15936 | 1:32,119,622-32,120,266 | - | C2H1g11458 | CX1g006004 | LOC_Os01g62514 | Os01g0842801 | - | Detail |
| C1H1g02981 | 1:32,129,185-32,132,691 | - | C2H6g28684 | CX1g006531 | LOC_Os03g62810 | - | - | Detail |
| C1H1g19031 | 1:32,132,893-32,134,636 | - | C2H1g15515 | CX1g006003 | LOC_Os01g62530 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g11754 | 1:31,664,071-31,668,463 | + | C1H1g15578 | CX1g001115 | LOC_Os01g61830 | Os01g0834700 | - | Detail |
| C2H1g04024 | 1:31,671,750-31,672,915 | - | C1H1g28438 | CX1g005583 | LOC_Os01g61840 | Os01g0834800 | - | Detail |
| C2H1g07677 | 1:31,680,907-31,690,138 | - | C1H1g29053 | CX1g004964 | LOC_Os01g61860 | Os01g0835000 | - | Detail |
| C2H1g02343 | 1:31,705,293-31,709,691 | + | C1H1g14368 | CX1g001158 | LOC_Os01g61880 | Os01g0835500 | - | Detail |
| C2H1g27745 | 1:31,720,413-31,721,614 | - | C1H1g23056 | CX1g000977 | LOC_Os01g61900 | Os01g0835700 | OsCCT01 | Detail |
| C2H1g21602 | 1:31,725,912-31,729,228 | - | C1H1g04133 | CX1g007240 | LOC_Os01g61910 | Os01g0835800 | - | Detail |
| C2H1g23810 | 1:31,737,549-31,737,794 | + | - | - | - | - | - | Detail |
| C2H1g29300 | 1:31,738,786-31,748,396 | + | C1H1g12123 | CX1g000993 | LOC_Os01g61930 | - | - | Detail |
| C2H1g15144 | 1:31,763,529-31,764,278 | - | C1H1g04982 | - | LOC_Os01g61950 | - | - | Detail |
| C2H1g29885 | 1:31,765,649-31,766,863 | - | C1H1g15863 | CX1g001966 | LOC_Os01g61960 | Os01g0836700 | - | Detail |
| C2H1g06537 | 1:31,783,539-31,786,652 | - | C1H1g22081 | CX1g004745 | LOC_Os01g61990 | Os01g0837000 | - | Detail |
| C2H1g25983 | 1:31,788,385-31,789,795 | + | C1H1g08351 | CX1g000248 | LOC_Os01g62000 | Os01g0837100 | OsPLL2 | Detail |
| C2H1g10234 | 1:31,789,909-31,792,207 | + | C1H1g29335 | CX1g003679 | LOC_Os01g62010 | Os01g0837200 | - | Detail |
| C2H1g23741 | 1:31,793,893-31,797,615 | + | C1H1g10810 | CX1g003883 | LOC_Os01g62020 | Os01g0837300 | OsUXS4 | Detail |
| C2H1g07218 | 1:31,799,152-31,804,468 | + | C1H1g12894 | CX1g001070 | LOC_Os01g62040 | Os01g0837500 | - | Detail |
| C2H1g26587 | 1:31,808,511-31,809,296 | + | C1H1g00961 | CX1g002011 | LOC_Os01g62060 | Os01g0837600 | DGP1 | Detail |
| C2H1g28819 | 1:31,818,681-31,823,341 | - | C1H1g29125 | CX1g002419 | LOC_Os01g62070 | Os01g0837800 | - | Detail |
| C2H1g16663 | 1:31,827,220-31,830,953 | - | C1H1g06942 | CX1g006172 | LOC_Os01g62080 | Os01g0837900 | - | Detail |
| C2H1g02384 | 1:31,851,338-31,854,908 | + | C1H1g29226 | CX1g002865 | LOC_Os05g38610 | Os01g0838800 | - | Detail |
| C2H1g20151 | 1:31,855,352-31,858,418 | - | C1H1g17733 | CX1g005211 | LOC_Os01g62160 | Os01g0838900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |