| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g20143 | 1:31,987,794-31,990,960 | + | C2H1g09224 | CX1g000114 | LOC_Os01g62290 | Os01g0840100 | cHsp70-1 | Detail |
| C1H1g19514 | 1:31,992,421-31,993,980 | - | C2H1g21773 | CX1g000325 | LOC_Os01g62300 | Os01g0840200 | - | Detail |
| C1H1g29893 | 1:32,007,669-32,008,127 | - | C2H1g18215 | CX1g001065 | LOC_Os01g62310 | - | - | Detail |
| C1H1g00377 | 1:32,008,788-32,009,901 | - | C2H1g27558 | CX1g001065 | LOC_Os01g62310 | Os01g0840300 | - | Detail |
| C1H1g17139 | 1:32,017,474-32,019,413 | - | C2H1g18392 | CX1g004150 | LOC_Os01g62350 | Os01g0840700 | - | Detail |
| C1H1g12130 | 1:32,025,615-32,026,759 | + | C2H1g21625 | CX1g003133 | LOC_Os01g62370 | Os01g0841000 | - | Detail |
| C1H1g21585 | 1:32,032,310-32,033,584 | - | C2H1g05303 | CX1g001868 | LOC_Os01g62380 | Os01g0841100 | - | Detail |
| C1H1g08278 | 1:32,036,050-32,040,980 | - | C2H1g18206 | CX1g005410 | LOC_Os01g62390 | Os01g0841200 | - | Detail |
| C1H1g27442 | 1:32,048,806-32,054,280 | + | C2H1g01645 | CX1g006283 | LOC_Os01g62410 | Os01g0841500 | OsMYB3R-2, OsMYB3R2, MYB3R2 | Detail |
| C1H1g29013 | 1:32,054,965-32,057,733 | + | C2H1g14112 | CX1g001946 | LOC_Os01g62420 | Os01g0841600 | OscTPI | Detail |
| C1H1g20425 | 1:32,062,521-32,063,627 | + | C2H1g22797 | CX1g000812 | LOC_Os01g62430 | Os01g0841700 | OsERG1, OsERG1a, Rpp17-1 | Detail |
| C1H1g09787 | 1:32,064,224-32,071,896 | - | C2H1g16312 | CX1g005408 | LOC_Os01g62440 | Os01g0841800 | - | Detail |
| C1H1g04968 | 1:32,084,495-32,087,400 | + | C2H1g22514 | CX1g003735 | LOC_Os01g62460 | Os01g0842200 | - | Detail |
| C1H1g14751 | 1:32,092,309-32,095,261 | - | C2H1g04788 | CX1g004737 | LOC_Os01g62480 | Os01g0842400 | - | Detail |
| C1H1g07793 | 1:32,103,798-32,106,521 | - | C2H1g08845 | CX1g005658 | LOC_Os01g62490 | Os01g0842500 | - | Detail |
| C1H1g12370 | 1:32,108,857-32,114,415 | - | C2H1g06756 | CX1g000259 | LOC_Os01g62500 | Os01g0842600 | - | Detail |
| C1H1g05990 | 1:32,115,188-32,115,835 | - | C2H1g03150 | CX1g006004 | LOC_Os01g62510 | Os01g0972800 | - | Detail |
| C1H1g15936 | 1:32,119,622-32,120,266 | - | C2H1g11458 | CX1g006004 | LOC_Os01g62514 | Os01g0842801 | - | Detail |
| C1H1g02981 | 1:32,129,185-32,132,691 | - | C2H6g28684 | CX1g006531 | LOC_Os03g62810 | - | - | Detail |
| C1H1g19031 | 1:32,132,893-32,134,636 | - | C2H1g15515 | CX1g006003 | LOC_Os01g62530 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g15408 | 6:26,627,966-26,630,985 | + | C1H6g24270 | CX6g045220 | LOC_Os06g49970 | Os06g0713800 | Amy2A | Detail |
| C2H6g18009 | 6:26,632,936-26,635,330 | - | C1H6g10061 | CX6g043803 | LOC_Os06g49980 | Os06g0713900 | - | Detail |
| C2H6g23408 | 6:26,636,327-26,640,833 | - | C1H6g23571 | CX6g043515 | LOC_Os06g49990 | Os06g0714000 | - | Detail |
| C2H6g06674 | 6:26,641,564-26,643,579 | - | C1H6g04457 | CX6g042982 | LOC_Os06g50000 | Os06g0714100 | - | Detail |
| C2H6g13072 | 6:26,652,287-26,659,034 | + | C1H6g20892 | CX6g044128 | LOC_Os06g50030 | Os06g0714200 | - | Detail |
| C2H6g05445 | 6:26,687,371-26,690,956 | + | C1H6g16010 | CX6g042358 | LOC_Os06g50050 | Os06g0714500 | - | Detail |
| C2H6g21497 | 6:26,695,644-26,696,153 | + | C1H6g19044 | CX6g044692 | LOC_Os06g50080 | Os06g0714800 | - | Detail |
| C2H6g14966 | 6:26,701,154-26,701,466 | - | C1H6g17004 | CX6g041883 | LOC_Os06g50090 | - | - | Detail |
| C2H6g13472 | 6:26,701,912-26,705,190 | - | C1H6g14885 | CX6g045381 | LOC_Os06g50100 | Os06g0714900 | - | Detail |
| C2H6g19684 | 6:26,708,559-26,712,190 | + | C1H6g12343 | CX6g045152 | LOC_Os06g50110 | Os06g0715000 | - | Detail |
| C2H6g13051 | 6:26,713,076-26,716,547 | - | C1H6g17214 | CX6g045632 | LOC_Os06g50120 | Os06g0715100 | OsNPSN11 | Detail |
| C2H6g30614 | 6:26,720,282-26,722,360 | - | C1H6g24910 | CX6g042488 | LOC_Os06g50140 | Os06g0715300 | - | Detail |
| C2H6g23697 | 6:26,723,450-26,726,498 | + | C1H6g19558 | CX6g043292 | LOC_Os06g50146 | Os06g0715400 | - | Detail |
| C2H6g22072 | 6:26,726,917-26,730,411 | + | C1H6g22509 | CX6g043745 | LOC_Os06g50154 | Os06g0715500 | - | Detail |
| C2H6g12480 | 6:26,732,372-26,737,334 | - | C1H6g28252 | CX6g044107 | LOC_Os06g50170 | Os06g0715600 | - | Detail |
| C2H6g11669 | 6:26,739,488-26,742,792 | - | C1H6g25941 | CX6g041175 | LOC_Os06g50180 | Os06g0715700 | - | Detail |
| C2H6g30186 | 6:26,750,897-26,756,759 | + | C1H6g13735 | CX6g043052 | LOC_Os06g50220 | Os06g0716000 | - | Detail |
| C2H6g03613 | 6:26,761,158-26,763,450 | + | C1H6g24116 | CX6g043265 | LOC_Os06g50240 | Os06g0716200 | - | Detail |
| C2H6g24995 | 6:26,763,701-26,766,008 | - | C1H6g20858 | CX6g041622 | LOC_Os06g50250 | Os06g0716467 | - | Detail |
| C2H6g07088 | 6:26,767,149-26,772,937 | - | C1H6g22907 | CX6g042424 | LOC_Os06g50300 | Os06g0716700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |