| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g20143 | 1:31,987,794-31,990,960 | + | C2H1g09224 | CX1g000114 | LOC_Os01g62290 | Os01g0840100 | cHsp70-1 | Detail |
| C1H1g19514 | 1:31,992,421-31,993,980 | - | C2H1g21773 | CX1g000325 | LOC_Os01g62300 | Os01g0840200 | - | Detail |
| C1H1g29893 | 1:32,007,669-32,008,127 | - | C2H1g18215 | CX1g001065 | LOC_Os01g62310 | - | - | Detail |
| C1H1g00377 | 1:32,008,788-32,009,901 | - | C2H1g27558 | CX1g001065 | LOC_Os01g62310 | Os01g0840300 | - | Detail |
| C1H1g17139 | 1:32,017,474-32,019,413 | - | C2H1g18392 | CX1g004150 | LOC_Os01g62350 | Os01g0840700 | - | Detail |
| C1H1g12130 | 1:32,025,615-32,026,759 | + | C2H1g21625 | CX1g003133 | LOC_Os01g62370 | Os01g0841000 | - | Detail |
| C1H1g21585 | 1:32,032,310-32,033,584 | - | C2H1g05303 | CX1g001868 | LOC_Os01g62380 | Os01g0841100 | - | Detail |
| C1H1g08278 | 1:32,036,050-32,040,980 | - | C2H1g18206 | CX1g005410 | LOC_Os01g62390 | Os01g0841200 | - | Detail |
| C1H1g27442 | 1:32,048,806-32,054,280 | + | C2H1g01645 | CX1g006283 | LOC_Os01g62410 | Os01g0841500 | OsMYB3R-2, OsMYB3R2, MYB3R2 | Detail |
| C1H1g29013 | 1:32,054,965-32,057,733 | + | C2H1g14112 | CX1g001946 | LOC_Os01g62420 | Os01g0841600 | OscTPI | Detail |
| C1H1g20425 | 1:32,062,521-32,063,627 | + | C2H1g22797 | CX1g000812 | LOC_Os01g62430 | Os01g0841700 | OsERG1, OsERG1a, Rpp17-1 | Detail |
| C1H1g09787 | 1:32,064,224-32,071,896 | - | C2H1g16312 | CX1g005408 | LOC_Os01g62440 | Os01g0841800 | - | Detail |
| C1H1g04968 | 1:32,084,495-32,087,400 | + | C2H1g22514 | CX1g003735 | LOC_Os01g62460 | Os01g0842200 | - | Detail |
| C1H1g14751 | 1:32,092,309-32,095,261 | - | C2H1g04788 | CX1g004737 | LOC_Os01g62480 | Os01g0842400 | - | Detail |
| C1H1g07793 | 1:32,103,798-32,106,521 | - | C2H1g08845 | CX1g005658 | LOC_Os01g62490 | Os01g0842500 | - | Detail |
| C1H1g12370 | 1:32,108,857-32,114,415 | - | C2H1g06756 | CX1g000259 | LOC_Os01g62500 | Os01g0842600 | - | Detail |
| C1H1g05990 | 1:32,115,188-32,115,835 | - | C2H1g03150 | CX1g006004 | LOC_Os01g62510 | Os01g0972800 | - | Detail |
| C1H1g15936 | 1:32,119,622-32,120,266 | - | C2H1g11458 | CX1g006004 | LOC_Os01g62514 | Os01g0842801 | - | Detail |
| C1H1g02981 | 1:32,129,185-32,132,691 | - | C2H6g28684 | CX1g006531 | LOC_Os03g62810 | - | - | Detail |
| C1H1g19031 | 1:32,132,893-32,134,636 | - | C2H1g15515 | CX1g006003 | LOC_Os01g62530 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g08537 | 1:24,645,168-24,654,570 | - | C1H1g16435 | CX1g002269 | LOC_Os01g48330 | Os01g0674100 | - | Detail |
| C2H1g25308 | 1:24,656,210-24,656,871 | + | - | CX6g042280 | LOC_Os01g48339 | Os01g0372100 | - | Detail |
| C2H1g09956 | 1:24,665,832-24,666,220 | + | C1H1g18336 | CX1g002853 | LOC_Os01g48360 | Os01g0674400 | - | Detail |
| C2H1g02713 | 1:24,667,701-24,672,177 | - | C1H1g27753 | CX1g000620 | LOC_Os01g48370 | Os01g0674500 | - | Detail |
| C2H1g18985 | 1:24,677,358-24,683,617 | + | C1H1g00871 | CX1g004696 | LOC_Os01g48380 | Os01g0674700 | ASL3 | Detail |
| C2H1g24321 | 1:24,685,104-24,691,892 | + | C1H1g21765 | CX1g004277 | LOC_Os01g48390 | Os01g0674800 | - | Detail |
| C2H1g20771 | 1:24,694,684-24,697,004 | + | C1H1g11274 | CX1g000551 | LOC_Os01g48410 | Os01g0675000 | OsRopGEF6 | Detail |
| C2H1g09998 | 1:24,698,068-24,699,873 | - | C1H1g18154 | CX1g000957 | LOC_Os01g48420 | Os01g0675100 | - | Detail |
| C2H1g00882 | 1:24,702,234-24,703,340 | - | C1H1g15939 | CX1g000359 | LOC_Os01g48430 | Os01g0675400 | - | Detail |
| C2H1g29363 | 1:24,705,133-24,709,010 | - | C1H1g11012 | CX1g002880 | LOC_Os01g48440 | Os01g0675500 | - | Detail |
| C2H1g29748 | 1:24,717,156-24,717,726 | - | C1H2g19748 | CX2g022355 | - | - | - | Detail |
| C2H1g14959 | 1:24,724,122-24,727,869 | + | C1H1g25883 | CX1g002244 | LOC_Os01g48444 | Os01g0675700 | - | Detail |
| C2H1g06845 | 1:24,752,904-24,754,591 | + | C1H1g16861 | CX1g003850 | LOC_Os01g48530 | Os01g0676900 | - | Detail |
| C2H1g03724 | 1:24,759,601-24,760,254 | + | C1H1g30124 | CX1g000037 | LOC_Os01g48540 | Os01g0677000 | - | Detail |
| C2H1g01752 | 1:24,760,299-24,761,671 | + | C1H1g30124 | CX1g000037 | LOC_Os01g48540 | Os01g0677000 | - | Detail |
| C2H1g01495 | 1:24,774,611-24,778,283 | + | C1H1g08755 | CX1g000351 | LOC_Os01g48570 | Os11g0466300 | - | Detail |
| C2H1g13965 | 1:24,781,479-24,784,206 | + | C1H1g10109 | CX1g003581 | LOC_Os01g48580 | Os01g0677500 | - | Detail |
| C2H1g18016 | 1:24,799,418-24,801,703 | + | - | CX1g000852 | LOC_Os01g48620 | Os01g0678000 | - | Detail |
| C2H1g00029 | 1:24,808,183-24,811,092 | + | - | CX1g004827 | LOC_Os01g48640 | Os01g0678100 | - | Detail |
| C2H1g26788 | 1:24,813,151-24,816,140 | + | - | CX1g006166 | LOC_Os01g48660 | Os01g0678400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |