| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g29335 | 1:31,872,138-31,873,792 | + | C2H1g10234 | CX1g003679 | LOC_Os01g62010 | Os01g0837200 | - | Detail |
| C1H1g10810 | 1:31,875,534-31,879,239 | + | C2H1g23741 | CX1g003883 | LOC_Os01g62020 | Os01g0837300 | OsUXS4 | Detail |
| C1H1g12894 | 1:31,880,496-31,885,845 | + | C2H1g07218 | CX1g001070 | LOC_Os01g62040 | Os01g0837500 | - | Detail |
| C1H1g00961 | 1:31,891,635-31,892,414 | + | C2H1g26587 | CX1g002011 | LOC_Os01g62060 | Os01g0837600 | DGP1 | Detail |
| C1H1g17576 | 1:31,896,488-31,896,748 | - | - | CX1g005449 | - | Os01g0837700 | - | Detail |
| C1H1g29125 | 1:31,897,160-31,901,682 | - | C2H1g28819 | CX1g002419 | LOC_Os01g62070 | Os01g0837800 | - | Detail |
| C1H1g06942 | 1:31,905,964-31,909,673 | - | C2H1g16663 | CX1g006172 | LOC_Os01g62080 | Os01g0837900 | - | Detail |
| C1H1g02866 | 1:31,913,861-31,914,142 | - | - | CX1g005503 | LOC_Os01g62110 | Os01g0838200 | - | Detail |
| C1H1g31822 | 1:31,917,634-31,918,939 | - | - | - | - | Os01g0838350 | - | Detail |
| C1H1g06334 | 1:31,921,791-31,922,438 | - | C2H5g00940 | CX1g002459 | LOC_Os01g62130 | Os01g0838600 | - | Detail |
| C1H1g29226 | 1:31,928,732-31,932,201 | + | C2H1g02384 | CX1g002865 | LOC_Os05g38610 | Os01g0838800 | - | Detail |
| C1H1g17733 | 1:31,932,734-31,935,801 | - | C2H1g20151 | CX1g005211 | LOC_Os01g62160 | Os01g0838900 | - | Detail |
| C1H1g09133 | 1:31,958,484-31,959,032 | + | C2H5g12287 | CX1g002459 | LOC_Os01g62190 | Os01g0839100 | ZFP179 | Detail |
| C1H1g26731 | 1:31,959,909-31,960,129 | - | C2H1g08125 | CX1g003395 | LOC_Os01g62200 | Os01g0839200 | OsDSR2 | Detail |
| C1H1g10232 | 1:31,960,858-31,962,212 | - | C2H1g16708 | CX1g003395 | LOC_Os01g62200 | Os01g0839200 | OsDSR2 | Detail |
| C1H1g15957 | 1:31,964,741-31,966,881 | + | C2H1g22109 | CX1g004020 | LOC_Os01g62210 | Os01g0839300 | - | Detail |
| C1H1g05756 | 1:31,968,329-31,969,699 | + | C2H1g29778 | CX1g004020 | LOC_Os01g62220 | Os01g0839400 | - | Detail |
| C1H1g25854 | 1:31,970,603-31,971,022 | - | C2H1g27325 | CX1g002747 | LOC_Os01g62230 | Os01g0839500 | - | Detail |
| C1H1g17963 | 1:31,973,996-31,977,554 | - | C2H1g11723 | CX1g000448 | LOC_Os01g62244 | Os01g0839700 | - | Detail |
| C1H1g24415 | 1:31,983,398-31,984,141 | - | C2H1g28281 | - | LOC_Os01g62260 | Os01g0839900 | OsOLP1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g24206 | 3:8,667,771-8,672,718 | + | C1H3g05382 | CX3g025186 | LOC_Os03g17730 | Os03g0286200 | - | Detail |
| C2H3g05135 | 3:8,677,799-8,682,189 | + | C1H3g30819 | CX3g029393 | LOC_Os03g17740 | Os03g0286300 | - | Detail |
| C2H3g11924 | 3:8,683,738-8,686,415 | - | C1H3g23357 | CX3g028814 | LOC_Os03g17760 | Os03g0286500 | - | Detail |
| C2H3g28874 | 3:8,695,021-8,697,752 | + | C1H3g16747 | CX3g028365 | LOC_Os03g17780 | Os03g0286800 | - | Detail |
| C2H3g08715 | 3:8,699,607-8,699,900 | - | C1H3g27086 | CX3g026690 | LOC_Os03g17790 | Os03g0286900 | OsRCI2-5 | Detail |
| C2H3g22847 | 3:8,712,856-8,714,795 | - | C1H3g29184 | CX3g030677 | LOC_Os03g17800 | Os03g0287100 | OsPITPα, OsPITPalpha | Detail |
| C2H3g20359 | 3:8,722,326-8,723,144 | - | C1H3g05095 | CX3g026247 | LOC_Os03g17810 | Os03g0287400 | - | Detail |
| C2H3g27675 | 3:8,735,429-8,742,014 | + | C1H3g02097 | CX3g029968 | LOC_Os03g17840 | Os03g0287700 | - | Detail |
| C2H3g09757 | 3:8,747,148-8,751,931 | + | C1H3g16177 | CX3g025194 | LOC_Os03g17850 | Os03g0287800 | OsGT43B | Detail |
| C2H3g14774 | 3:8,753,869-8,755,869 | - | C1H3g12393 | CX3g027864 | LOC_Os03g17860 | Os03g0287900 | - | Detail |
| C2H3g27564 | 3:8,755,868-8,758,577 | + | C1H3g31312 | CX3g028664 | LOC_Os03g17870 | Os03g0288000 | - | Detail |
| C2H3g22831 | 3:8,759,496-8,765,252 | + | - | - | - | Os02g0151600 | - | Detail |
| C2H3g23362 | 3:8,774,283-8,779,488 | + | C1H3g00118 | CX3g028015 | LOC_Os03g17900 | Os03g0288300 | - | Detail |
| C2H3g17267 | 3:8,780,761-8,782,793 | + | C1H3g25481 | CX3g026722 | LOC_Os03g17910 | Os03g0288400 | - | Detail |
| C2H3g21876 | 3:8,783,154-8,787,793 | + | C1H3g14781 | CX3g027011 | LOC_Os03g17920 | Os03g0288500 | - | Detail |
| C2H3g27997 | 3:8,789,437-8,792,622 | + | C1H3g27293 | CX3g030831 | LOC_Os03g17930 | Os03g0288600 | - | Detail |
| C2H3g11409 | 3:8,793,554-8,795,466 | - | C1H3g19930 | CX3g027560 | LOC_Os03g17940 | Os03g0288700 | - | Detail |
| C2H3g03519 | 3:8,799,470-8,803,591 | + | C1H3g10814 | CX3g029037 | LOC_Os03g17950 | Os03g0288800 | - | Detail |
| C2H3g04708 | 3:8,803,959-8,806,458 | + | C1H3g03942 | CX3g026332 | LOC_Os03g17960 | Os03g0288900 | - | Detail |
| C2H3g30489 | 3:8,811,026-8,816,343 | + | C1H3g28173 | CX3g025870 | LOC_Os03g17980 | Os03g0289100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |