| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g12416 | 1:31,702,167-31,706,617 | - | C2H1g03973 | CX1g000146 | LOC_Os01g61760 | Os01g0834100 | - | Detail |
| C1H1g06212 | 1:31,710,480-31,721,299 | + | C2H1g25411 | CX1g002696 | LOC_Os01g61780 | Os01g0834200 | - | Detail |
| C1H1g30061 | 1:31,728,722-31,730,161 | - | C2H1g11057 | CX1g000392 | LOC_Os01g61810 | Os01g0834400 | HAP3A, OsHAP3A, OsNF-YB-2, NFYB2 | Detail |
| C1H1g07712 | 1:31,731,952-31,736,728 | - | C2H1g10042 | CX1g001710 | LOC_Os01g61814 | Os01g0834600 | - | Detail |
| C1H1g15578 | 1:31,739,248-31,743,641 | + | C2H1g11754 | CX1g001115 | LOC_Os01g61830 | Os01g0834700 | - | Detail |
| C1H1g28438 | 1:31,746,927-31,747,166 | - | C2H1g04024 | CX1g005583 | LOC_Os01g61840 | Os01g0834800 | - | Detail |
| C1H1g29053 | 1:31,755,807-31,765,030 | - | C2H1g07677 | CX1g004964 | LOC_Os01g61860 | Os01g0835000 | - | Detail |
| C1H1g14368 | 1:31,780,490-31,785,814 | + | C2H1g02343 | CX1g001158 | LOC_Os01g61880 | Os01g0835500 | - | Detail |
| C1H1g23056 | 1:31,796,546-31,797,747 | - | C2H1g27745 | CX1g000977 | LOC_Os01g61900 | Os01g0835700 | OsCCT01 | Detail |
| C1H1g04133 | 1:31,802,050-31,805,363 | - | C2H1g21602 | CX1g007240 | LOC_Os01g61910 | Os01g0835800 | - | Detail |
| C1H1g21523 | 1:31,809,401-31,809,712 | + | C2H5g09767 | CX5g040997 | LOC_Os01g61920 | Os01g0835900 | - | Detail |
| C1H1g12123 | 1:31,814,530-31,824,148 | + | C2H1g29300 | CX1g000993 | LOC_Os01g61930 | Os05g0462600 | - | Detail |
| C1H1g13267 | 1:31,831,536-31,833,788 | + | C2H1g27556 | CX1g006810 | LOC_Os01g61940 | Os01g0836600 | OsABCG3 | Detail |
| C1H1g04982 | 1:31,839,610-31,840,164 | - | C2H1g15144 | - | LOC_Os01g61950 | - | - | Detail |
| C1H1g15863 | 1:31,841,733-31,842,944 | - | C2H1g29885 | CX1g001966 | LOC_Os01g61960 | Os01g0836700 | - | Detail |
| C1H1g03833 | 1:31,844,908-31,846,257 | - | C2H1g29885 | CX1g004021 | LOC_Os01g61970 | Os01g0836800 | - | Detail |
| C1H1g17938 | 1:31,849,282-31,849,788 | + | - | - | - | - | - | Detail |
| C1H1g23659 | 1:31,855,439-31,856,533 | + | - | CX1g000026 | LOC_Os01g61980 | Os01g0836900 | - | Detail |
| C1H1g22081 | 1:31,859,405-31,862,509 | - | C2H1g06537 | CX1g004745 | LOC_Os01g61990 | Os01g0837000 | - | Detail |
| C1H1g08351 | 1:31,864,744-31,866,551 | + | C2H1g25983 | CX1g000248 | LOC_Os01g62000 | Os01g0837100 | OsPLL2 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g00179 | 1:21,598,278-21,606,176 | - | C1H1g16733 | CX1g006178 | LOC_Os01g42410 | Os01g0609900 | - | Detail |
| C2H1g12978 | 1:21,620,497-21,622,985 | + | C1H1g07824 | CX1g000446 | LOC_Os01g42430 | Os01g0610100 | - | Detail |
| C2H1g15549 | 1:21,628,765-21,633,829 | + | C1H1g31299 | CX1g000122 | LOC_Os01g42460 | Os01g0610300 | OsASI1, OsIBM2 | Detail |
| C2H1g30233 | 1:21,636,451-21,639,228 | + | C1H1g17082 | CX1g001787 | LOC_Os01g42470 | Os01g0610400 | - | Detail |
| C2H1g01156 | 1:21,641,894-21,644,853 | - | C1H1g00950 | CX1g004113 | LOC_Os01g42480 | Os01g0610500 | - | Detail |
| C2H1g27976 | 1:21,648,205-21,655,957 | - | C1H1g10040 | CX1g006192 | LOC_Os01g42490 | Os01g0610600 | - | Detail |
| C2H1g11351 | 1:21,656,864-21,659,838 | - | C1H1g07937 | CX1g001957 | LOC_Os01g42500 | Os01g0610700 | - | Detail |
| C2H1g18697 | 1:21,662,265-21,665,341 | - | C1H1g20514 | CX1g001059 | LOC_Os01g42510 | Os01g0610800 | - | Detail |
| C2H1g27995 | 1:21,677,207-21,680,781 | + | C1H1g18308 | CX1g003691 | LOC_Os01g42520 | Os01g0611000 | - | Detail |
| C2H1g28850 | 1:21,683,507-21,685,671 | + | C1H1g31223 | CX1g007042 | LOC_Os01g47730 | Os01g0611100 | OsRAN1 | Detail |
| C2H1g16163 | 1:21,687,431-21,688,806 | - | C1H1g01107 | CX1g000611 | LOC_Os01g42540 | - | - | Detail |
| C2H1g18921 | 1:21,697,889-21,698,371 | + | - | CX1g002511 | LOC_Os01g42610 | - | - | Detail |
| C2H1g24169 | 1:21,701,206-21,702,308 | + | C1H1g13509 | CX1g002511 | LOC_Os01g42610 | Os01g0337100 | OsTPS1 | Detail |
| C2H1g29383 | 1:21,706,090-21,708,507 | - | C1H1g26944 | CX1g003287 | LOC_Os01g42620 | Os01g0611900 | - | Detail |
| C2H1g14636 | 1:21,709,333-21,712,785 | - | C1H1g21989 | CX1g005532 | LOC_Os01g42630 | Os01g0612000 | - | Detail |
| C2H1g23201 | 1:21,717,259-21,721,261 | + | C1H1g24195 | CX1g005764 | LOC_Os01g42650 | Os01g0612200 | - | Detail |
| C2H1g08682 | 1:21,739,093-21,743,240 | + | C1H1g12693 | CX1g006516 | LOC_Os01g42690 | Os01g0612500 | - | Detail |
| C2H1g14970 | 1:21,746,861-21,748,749 | - | - | CX1g005996 | LOC_Os01g42700 | Os01g0612600 | SIDP361 | Detail |
| C2H1g20504 | 1:21,754,606-21,761,660 | + | C1H1g19005 | CX1g005902 | LOC_Os01g42710 | Os01g0612700 | LOL2, OsLOL2, OsLOL5 | Detail |
| C2H1g10217 | 1:21,762,667-21,763,179 | + | C1H1g28272 | CX1g003214 | LOC_Os01g42720 | Os01g0612800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |