| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g07860 | 1:31,440,630-31,442,187 | - | C2H1g10533 | CX1g007244 | LOC_Os01g61200 | Os01g0827700 | - | Detail |
| C1H1g02301 | 1:31,445,166-31,445,786 | + | C2H1g13011 | CX1g001942 | LOC_Os01g61210 | Os01g0827800 | - | Detail |
| C1H1g04351 | 1:31,454,306-31,456,284 | + | C2H1g00363 | CX1g000526 | LOC_Os01g61230 | Os01g0828100 | - | Detail |
| C1H1g01848 | 1:31,457,199-31,459,135 | + | C2H1g02486 | CX1g005049 | LOC_Os01g61240 | Os01g0828200 | - | Detail |
| C1H1g21043 | 1:31,460,075-31,465,026 | + | C2H1g25148 | CX1g002338 | LOC_Os01g61250 | Os01g0828300 | - | Detail |
| C1H1g18673 | 1:31,478,230-31,478,871 | - | - | CX1g002334 | LOC_Os01g61310 | Os01g0828900 | OsG1L7 | Detail |
| C1H1g24363 | 1:31,482,271-31,482,981 | + | C2H1g26560 | CX1g002824 | LOC_Os01g61320 | Os01g0829000 | - | Detail |
| C1H1g13356 | 1:31,487,038-31,488,449 | + | C2H1g27474 | CX1g002824 | LOC_Os01g61320 | Os01g0829000 | - | Detail |
| C1H1g28117 | 1:31,489,782-31,491,817 | - | C2H1g01343 | CX1g006348 | LOC_Os01g61330 | Os01g0829100 | - | Detail |
| C1H1g21582 | 1:31,500,979-31,501,749 | + | C2H1g16640 | CX1g002184 | LOC_Os01g61350 | Os01g0829400 | - | Detail |
| C1H1g12640 | 1:31,508,290-31,509,450 | - | - | CX1g006950 | LOC_Os01g61370 | Os01g0829600 | - | Detail |
| C1H1g09215 | 1:31,512,823-31,514,013 | + | C2H1g05562 | CX1g006650 | LOC_Os01g61380 | Os01g0829800 | - | Detail |
| C1H1g13226 | 1:31,514,666-31,517,240 | - | C2H1g10105 | CX1g004731 | LOC_Os01g61390 | Os01g0829900 | YSL18, OsYSL18, OsYs2 | Detail |
| C1H1g03596 | 1:31,518,009-31,521,001 | - | C2H1g20100 | CX1g005073 | LOC_Os01g61400 | Os01g0830000 | - | Detail |
| C1H1g18571 | 1:31,521,487-31,525,420 | + | C2H1g21734 | CX1g003481 | LOC_Os01g61410 | Os01g0830100 | - | Detail |
| C1H1g15455 | 1:31,527,896-31,529,581 | - | C2H1g01891 | CX1g002466 | LOC_Os01g61420 | Os01g0830200 | - | Detail |
| C1H1g21385 | 1:31,531,178-31,532,506 | - | C2H1g12646 | - | LOC_Os01g61430 | Os01g0830300 | - | Detail |
| C1H1g09065 | 1:31,533,214-31,535,703 | - | C2H1g17929 | - | LOC_Os01g61430 | Os01g0830300 | - | Detail |
| C1H1g27297 | 1:31,536,445-31,538,474 | - | C2H1g16914 | CX1g003057 | LOC_Os01g61440 | Os01g0830500 | - | Detail |
| C1H1g26608 | 1:31,548,453-31,553,969 | + | C2H1g20160 | CX1g005544 | LOC_Os01g61460 | Os01g0830700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g03998 | 1:2,164,077-2,165,131 | - | C1H1g29078 | CX1g003888 | LOC_Os01g05370 | Os01g0144800 | - | Detail |
| C2H1g05408 | 1:2,174,818-2,178,246 | + | C1H1g29078 | CX1g003888 | LOC_Os01g05410 | Os01g0147001 | - | Detail |
| C2H1g08018 | 1:2,185,334-2,189,822 | + | C1H1g18605 | CX1g000323 | LOC_Os01g05420 | Os01g0147200 | - | Detail |
| C2H1g25573 | 1:2,191,220-2,194,402 | + | C1H1g08705 | CX1g001325 | LOC_Os01g05430 | Os01g0147300 | - | Detail |
| C2H1g12465 | 1:2,194,554-2,196,403 | - | C1H1g07217 | CX1g003030 | LOC_Os01g05440 | Os01g0147400 | - | Detail |
| C2H1g27793 | 1:2,197,356-2,199,409 | - | C1H1g03816 | - | LOC_Os01g05450 | Os01g0147600 | - | Detail |
| C2H1g00931 | 1:2,200,826-2,203,456 | - | C1H1g25686 | - | LOC_Os01g05460 | Os01g0147600 | - | Detail |
| C2H1g02244 | 1:2,205,153-2,207,498 | - | C1H1g30607 | CX1g003030 | LOC_Os01g05470 | Os01g0147700 | - | Detail |
| C2H1g25353 | 1:2,210,513-2,219,278 | - | C1H1g11928 | CX1g003030 | LOC_Os01g05470 | Os01g0147700 | - | Detail |
| C2H1g29480 | 1:2,221,494-2,225,565 | - | C1H1g17304 | CX1g005120 | LOC_Os01g05480 | Os01g0147800 | - | Detail |
| C2H1g30066 | 1:2,226,864-2,230,987 | - | C1H1g08404 | CX1g006525 | LOC_Os01g05490 | Os01g0147900 | OsTPI1, OsTPI1.1 | Detail |
| C2H1g25150 | 1:2,236,272-2,249,202 | + | C1H1g03903 | CX1g001423 | LOC_Os01g05500 | Os01g0148000 | - | Detail |
| C2H1g10498 | 1:2,256,405-2,259,371 | - | C1H1g24472 | CX1g005368 | LOC_Os01g05620 | Os01g0149500 | PIT, Pit, Pit(K59), Pit(Npb), Pi-t, PitNpb, PitK59 | Detail |
| C2H1g18971 | 1:2,261,730-2,262,191 | + | C1H1g09766 | CX1g005739 | LOC_Os01g05630 | Os01g0149600 | H2B | Detail |
| C2H1g06791 | 1:2,263,340-2,266,739 | - | C1H1g22469 | CX1g006643 | LOC_Os01g05640 | Os01g0149700 | KINt1 | Detail |
| C2H1g28846 | 1:2,268,550-2,269,982 | - | C1H1g18521 | - | LOC_Os01g05650 | Os01g0149800 | - | Detail |
| C2H1g25044 | 1:2,274,627-2,278,471 | - | C1H1g17924 | CX1g006502 | LOC_Os01g05660 | Os01g0149900 | - | Detail |
| C2H1g00511 | 1:2,283,854-2,287,505 | - | C1H1g30008 | CX1g002286 | LOC_Os01g05670 | Os01g0150000 | - | Detail |
| C2H1g17834 | 1:2,289,627-2,293,258 | + | C1H1g15806 | CX1g000079 | LOC_Os01g05680 | Os01g0150100 | OsPGGT I-β | Detail |
| C2H1g21300 | 1:2,294,207-2,296,973 | + | C1H1g24721 | CX4g035052 | LOC_Os01g05694 | Os01g0150200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |