| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g24767 | 1:31,286,368-31,288,410 | - | C2H1g26804 | CX1g004254 | LOC_Os01g60860 | Os01g0823900 | OsPUB3 | Detail |
| C1H1g23645 | 1:31,311,540-31,312,747 | + | C2H1g17727 | CX1g003469 | LOC_Os01g60900 | Os01g0824500 | OsEPFL9 | Detail |
| C1H1g13975 | 1:31,314,041-31,316,857 | + | C2H1g23198 | - | - | - | - | Detail |
| C1H1g18869 | 1:31,316,975-31,321,221 | + | C2H1g04173 | CX1g002737 | LOC_Os01g60910 | Os01g0824600 | - | Detail |
| C1H1g11676 | 1:31,325,052-31,326,511 | + | C2H1g16723 | CX1g003180 | LOC_Os01g60920 | Os01g0824700 | - | Detail |
| C1H1g20864 | 1:31,329,181-31,331,565 | + | C2H1g02718 | CX1g006995 | LOC_Os01g60930 | Os01g0824800 | - | Detail |
| C1H1g01275 | 1:31,333,008-31,333,688 | + | C2H1g05149 | CX1g005075 | LOC_Os01g60940 | Os01g0824900 | - | Detail |
| C1H1g30844 | 1:31,338,832-31,339,973 | + | C2H1g11166 | CX1g007134 | LOC_Os01g60960 | Os01g0825000 | LBD1-8 | Detail |
| C1H1g30975 | 1:31,357,035-31,359,303 | - | C2H1g11491 | CX1g003391 | LOC_Os01g61010 | Os01g0825500 | - | Detail |
| C1H1g04795 | 1:31,368,102-31,372,421 | - | C2H1g13725 | CX1g004445 | LOC_Os01g61030 | Os01g0825700 | - | Detail |
| C1H1g30003 | 1:31,374,374-31,380,144 | - | C2H1g15106 | CX1g002793 | LOC_Os01g61044 | Os01g0825800 | - | Detail |
| C1H1g26464 | 1:31,382,208-31,383,731 | + | C2H1g08505 | CX1g003706 | LOC_Os01g61060 | Os01g0825900 | - | Detail |
| C1H1g18090 | 1:31,384,234-31,384,675 | + | C2H1g08505 | CX1g003706 | LOC_Os01g61070 | Os01g0826000 | OsATX | Detail |
| C1H1g02547 | 1:31,402,255-31,404,413 | + | C2H1g27828 | CX1g004814 | LOC_Os01g61080 | Os01g0826400 | OsWRKY24 | Detail |
| C1H1g25773 | 1:31,408,290-31,408,805 | - | C2H1g30286 | CX1g003105 | LOC_Os05g39710 | Os01g0826800 | - | Detail |
| C1H1g20253 | 1:31,416,064-31,421,141 | - | C2H1g22369 | CX1g004110 | LOC_Os01g61120 | Os01g0826900 | - | Detail |
| C1H1g11730 | 1:31,422,389-31,426,099 | - | C2H1g22962 | CX1g005102 | LOC_Os01g61150 | Os01g0827200 | - | Detail |
| C1H1g13234 | 1:31,428,490-31,431,015 | + | C2H1g11237 | CX1g005055 | LOC_Os01g61160 | Os01g0827300 | OsChI1 | Detail |
| C1H1g28329 | 1:31,432,857-31,433,525 | - | C2H1g22870 | CX1g000110 | LOC_Os01g61170 | Os01g0827400 | - | Detail |
| C1H1g29263 | 1:31,434,440-31,438,149 | + | C2H1g27943 | CX1g001550 | LOC_Os01g61180 | Os01g0827500 | OsExo70B1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g26145 | 1:17,380,958-17,391,445 | + | C1H1g30357 | CX1g001131 | LOC_Os01g33800 | Os01g0521500 | - | Detail |
| C2H1g21205 | 1:17,411,129-17,412,480 | + | C1H1g25202 | CX1g005107 | LOC_Os01g33910 | Os01g0522100 | - | Detail |
| C2H1g18568 | 1:17,430,070-17,433,767 | + | C1H1g08450 | CX1g005107 | LOC_Os01g33930 | Os01g0522950 | - | Detail |
| C2H1g11782 | 1:17,436,425-17,439,737 | + | C1H1g10941 | CX1g006523 | LOC_Os01g33950 | Os01g0523100 | - | Detail |
| C2H1g13197 | 1:17,448,535-17,456,498 | + | C1H1g09014 | CX1g005107 | LOC_Os01g34000 | Os01g0524100 | ESA1 | Detail |
| C2H1g22021 | 1:17,484,938-17,486,550 | + | C1H1g03031 | CX1g000293 | LOC_Os01g34060 | Os01g0863300 | - | Detail |
| C2H1g01344 | 1:17,499,948-17,510,518 | + | C1H1g05337 | CX1g003083 | LOC_Os01g34080 | Os01g0524700 | - | Detail |
| C2H1g28979 | 1:17,563,858-17,564,544 | + | C1H1g08661 | - | - | - | - | Detail |
| C2H1g17057 | 1:17,566,324-17,569,069 | + | C1H1g01010 | CX1g002923 | LOC_Os01g34190 | Os01g0526100 | - | Detail |
| C2H1g19688 | 1:17,570,292-17,573,584 | + | C1H1g10979 | CX1g003716 | LOC_Os01g34200 | Os01g0526200 | - | Detail |
| C2H1g06550 | 1:17,610,748-17,626,534 | + | C1H1g28687 | CX1g006793 | LOC_Os01g34330 | Os01g0527400 | - | Detail |
| C2H1g06422 | 1:17,627,454-17,632,664 | - | C1H1g03628 | CX1g000241 | LOC_Os01g34350 | Os01g0527600 | SHL2, shl2, SHL2, sh2, OsRDR6 | Detail |
| C2H1g29503 | 1:17,637,195-17,642,074 | - | C1H1g18093 | CX1g004192 | LOC_Os01g34390 | Os01g0527700 | - | Detail |
| C2H1g02847 | 1:17,644,764-17,656,610 | + | C1H1g30321 | CX1g007113 | LOC_Os01g34430 | Os01g0528000 | - | Detail |
| C2H1g18148 | 1:17,670,542-17,674,451 | + | C1H1g07483 | CX1g005291 | LOC_Os01g34480 | Os01g0528800 | - | Detail |
| C2H1g18703 | 1:17,680,683-17,681,510 | + | C1H1g28876 | CX1g001971 | LOC_Os10g41640 | Os01g0882200 | - | Detail |
| C2H1g14328 | 1:17,743,444-17,747,974 | + | C1H1g30939 | CX1g007129 | LOC_Os01g34610 | Os01g0530300 | - | Detail |
| C2H1g24993 | 1:17,749,795-17,750,411 | + | C1H1g00833 | - | - | Os01g0530341 | - | Detail |
| C2H1g24220 | 1:17,750,861-17,753,176 | + | C1H1g19948 | CX5g040030 | LOC_Os01g34614 | Os01g0530366 | - | Detail |
| C2H1g14488 | 1:17,756,204-17,758,500 | + | C1H1g13045 | CX1g002051 | LOC_Os01g34620 | Os01g0530400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |