| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g03816 | 1:2,178,074-2,180,248 | - | C2H1g27793 | - | LOC_Os01g05450 | Os01g0147600 | - | Detail |
| C1H1g25686 | 1:2,181,635-2,184,291 | - | C2H1g00931 | - | LOC_Os01g05460 | Os01g0147600 | - | Detail |
| C1H1g30607 | 1:2,185,987-2,188,332 | - | C2H1g02244 | CX1g003030 | LOC_Os01g05470 | Os01g0147700 | - | Detail |
| C1H1g11928 | 1:2,191,347-2,200,110 | - | C2H1g25353 | CX1g003030 | LOC_Os01g05470 | Os01g0147700 | - | Detail |
| C1H1g17304 | 1:2,202,348-2,206,420 | - | C2H1g29480 | CX1g005120 | LOC_Os01g05480 | Os01g0147800 | - | Detail |
| C1H1g08404 | 1:2,207,371-2,211,040 | - | C2H1g30066 | CX1g006525 | LOC_Os01g05490 | Os01g0147900 | OsTPI1, OsTPI1.1 | Detail |
| C1H1g03903 | 1:2,216,879-2,229,802 | + | C2H1g25150 | CX1g001423 | LOC_Os01g05500 | Os01g0148000 | - | Detail |
| C1H1g22469 | 1:2,245,294-2,248,834 | - | C2H1g06791 | CX1g006643 | LOC_Os01g05640 | Os01g0149700 | KINt1 | Detail |
| C1H1g18521 | 1:2,250,673-2,252,104 | - | C2H1g28846 | - | LOC_Os01g05650 | Os01g0149800 | - | Detail |
| C1H1g17924 | 1:2,256,667-2,260,515 | - | C2H1g25044 | CX1g006502 | LOC_Os01g05660 | Os01g0149900 | - | Detail |
| C1H1g30008 | 1:2,265,914-2,269,572 | - | C2H1g00511 | CX1g002286 | LOC_Os01g05670 | Os01g0150000 | - | Detail |
| C1H1g15806 | 1:2,272,333-2,275,964 | + | C2H1g17834 | CX1g000079 | LOC_Os01g05680 | Os01g0150100 | OsPGGT I-β | Detail |
| C1H1g16095 | 1:2,276,915-2,277,206 | + | C2H1g21300 | CX4g035052 | LOC_Os01g05720 | Os01g0150200 | - | Detail |
| C1H1g24721 | 1:2,278,047-2,279,684 | + | C2H1g21300 | CX4g035052 | LOC_Os01g05694 | Os01g0150200 | - | Detail |
| C1H1g12773 | 1:2,281,434-2,284,860 | + | C2H1g19488 | - | LOC_Os01g05760 | Os01g0150400 | - | Detail |
| C1H1g02086 | 1:2,286,429-2,289,397 | + | C2H1g06641 | - | LOC_Os01g05720 | Os01g0150800 | - | Detail |
| C1H1g24478 | 1:2,294,882-2,297,822 | + | C2H1g05176 | - | LOC_Os01g05760 | Os01g0150800 | - | Detail |
| C1H1g14864 | 1:2,300,295-2,301,415 | + | C2H1g05176 | - | LOC_Os01g05744 | Os01g0150800 | - | Detail |
| C1H1g31823 | 1:2,309,978-2,313,212 | + | C2H1g04685 | CX1g006444 | LOC_Os01g05800 | Os01g0151200 | OsALB3 | Detail |
| C1H1g06017 | 1:2,316,041-2,320,870 | + | C2H1g05574 | CX1g002082 | LOC_Os01g05810 | Os01g0151400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g02733 | 1:884,535-889,937 | + | C1H1g26055 | - | LOC_Os01g02890 | Os01g0118300 | SUI1, OsSUI1, OsPSS-1, PSS-1, OsPSS1, PSS1 | Detail |
| C2H1g25728 | 1:894,155-897,038 | - | C1H1g13587 | - | LOC_Os01g02900 | Os01g0118400 | - | Detail |
| C2H1g24887 | 1:905,925-909,298 | - | C1H1g19340 | - | LOC_Os01g02910 | Os01g0118600 | - | Detail |
| C2H1g16133 | 1:911,678-914,437 | - | C1H1g28376 | - | LOC_Os01g02920 | Os01g0118700 | - | Detail |
| C2H1g28060 | 1:918,001-920,692 | - | C1H1g06299 | - | LOC_Os01g02930 | Os01g0119000 | - | Detail |
| C2H1g09306 | 1:929,892-933,650 | - | C1H1g29708 | - | LOC_Os01g02940 | Os01g0119100 | - | Detail |
| C2H1g08550 | 1:940,072-940,593 | + | C1H1g13986 | - | - | - | - | Detail |
| C2H1g16398 | 1:943,043-943,377 | - | - | - | - | - | - | Detail |
| C2H1g12790 | 1:949,262-951,056 | - | C1H1g01366 | - | LOC_Os01g02900 | Os01g0118400 | - | Detail |
| C2H1g11248 | 1:951,971-959,371 | - | C1H1g03260 | CX1g005069 | LOC_Os01g03020 | Os01g0120300 | - | Detail |
| C2H1g00360 | 1:959,862-962,390 | - | C1H1g11508 | CX1g001161 | LOC_Os01g03030 | Os01g0120400 | - | Detail |
| C2H1g23693 | 1:963,663-965,148 | - | C1H1g03575 | CX1g002228 | LOC_Os01g03040 | Os01g0120500 | - | Detail |
| C2H1g04453 | 1:966,291-968,290 | + | C1H1g25620 | CX1g000645 | LOC_Os01g03050 | Os01g0120600 | - | Detail |
| C2H1g02238 | 1:969,438-970,298 | - | - | CX1g004156 | LOC_Os01g03060 | Os01g0120700 | OsHRC | Detail |
| C2H1g07428 | 1:972,581-979,601 | - | C1H1g21397 | CX1g002673 | LOC_Os01g03070 | Os01g0120800 | - | Detail |
| C2H1g00585 | 1:982,117-982,722 | + | - | CX1g000024 | LOC_Os01g03080 | Os01g0121000 | - | Detail |
| C2H1g24271 | 1:984,465-987,582 | + | C1H1g11884 | CX1g003419 | LOC_Os01g03090 | Os01g0121100 | - | Detail |
| C2H1g00075 | 1:988,256-990,528 | - | C1H1g21163 | CX1g006351 | LOC_Os01g03100 | Os01g0121200 | - | Detail |
| C2H1g03352 | 1:998,181-1,003,121 | - | C1H1g02205 | CX1g000986 | LOC_Os01g03110 | Os01g0121300 | - | Detail |
| C2H1g22579 | 1:1,018,666-1,019,160 | - | C1H1g30654 | CX1g006139 | LOC_Os01g03130 | Os01g0121500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |