| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g00926 | 9:19,148,887-19,155,873 | - | C2H9g03901 | CX9g054868 | LOC_Os09g39590 | Os09g0569400 | - | Detail |
| C1H9g13772 | 9:19,156,172-19,157,219 | + | C2H9g04048 | CX9g055933 | LOC_Os09g39594 | Os09g0569450 | - | Detail |
| C1H9g28953 | 9:19,165,128-19,169,883 | + | C2H9g14401 | CX9g055966 | LOC_Os09g39620 | Os09g0569800 | - | Detail |
| C1H9g10272 | 9:19,177,893-19,182,818 | + | C2H9g02081 | CX9g055596 | LOC_Os09g39640 | Os09g0570000 | - | Detail |
| C1H9g00135 | 9:19,183,975-19,187,878 | + | C2H9g26603 | CX9g055372 | LOC_Os09g39650 | Os09g0570100 | - | Detail |
| C1H9g20201 | 9:19,189,374-19,192,982 | + | C2H9g05032 | CX9g055018 | LOC_Os09g39660 | Os09g0570200 | - | Detail |
| C1H9g00132 | 9:19,193,342-19,197,124 | + | C2H9g16473 | CX9g057426 | LOC_Os09g39670 | Os09g0570300 | - | Detail |
| C1H9g11225 | 9:19,197,602-19,202,167 | + | C2H9g16630 | CX9g055288 | LOC_Os09g39680 | Os09g0570400 | OsPHT4;4 | Detail |
| C1H9g00104 | 9:19,203,703-19,207,743 | + | C2H9g09981 | CX9g056911 | LOC_Os09g39690 | Os09g0570500 | - | Detail |
| C1H9g21911 | 9:19,208,703-19,212,989 | + | C2H9g17141 | CX9g055103 | LOC_Os09g39700 | Os09g0570600 | - | Detail |
| C1H9g14809 | 9:19,217,994-19,219,136 | + | C2H9g08714 | CX9g055729 | LOC_Os09g39720 | Os09g0570800 | SLC2 | Detail |
| C1H9g10742 | 9:19,219,575-19,220,147 | - | - | CX9g057519 | LOC_Os09g39730 | Os09g0570850 | - | Detail |
| C1H9g27323 | 9:19,220,574-19,225,131 | - | C2H9g29494 | CX9g057522 | LOC_Os09g39740 | Os09g0570900 | - | Detail |
| C1H9g16876 | 9:19,227,668-19,229,219 | - | C2H9g25303 | CX9g057568 | LOC_Os09g39750 | Os09g0571000 | - | Detail |
| C1H9g12880 | 9:19,230,802-19,232,769 | + | C2H9g13805 | CX9g055506 | LOC_Os09g39760 | Os09g0571100 | - | Detail |
| C1H9g04184 | 9:19,232,943-19,233,821 | - | C2H9g19104 | CX9g057734 | LOC_Os09g39770 | Os09g0571200 | OsC2DP | Detail |
| C1H9g28799 | 9:19,235,703-19,236,242 | + | C2H9g02330 | CX9g056767 | LOC_Os09g39780 | Os09g0571400 | OsCYP-25 | Detail |
| C1H9g20893 | 9:19,236,622-19,239,446 | - | C2H9g29216 | CX9g055064 | LOC_Os09g39790 | Os09g0571500 | - | Detail |
| C1H9g01571 | 9:19,244,452-19,244,850 | - | C2H9g20787 | CX9g056331 | LOC_Os09g39810 | Os09g0571700 | - | Detail |
| C1H9g27887 | 9:19,256,171-19,256,884 | + | C2H9g15745 | CX9g056331 | LOC_Os09g39850 | Os09g0572000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g05951 | 2:28,575,920-28,584,186 | + | C1H2g30195 | CX2g023148 | LOC_Os02g50970 | Os02g0743500 | DSM1 | Detail |
| C2H2g06723 | 2:28,585,666-28,586,568 | + | C1H2g30021 | CX2g020133 | LOC_Os02g50980 | Os02g0743600 | - | Detail |
| C2H2g09821 | 2:28,597,939-28,600,115 | + | C1H2g25365 | CX2g022084 | LOC_Os02g50990 | Os02g0743700 | - | Detail |
| C2H2g07616 | 2:28,601,564-28,604,792 | - | C1H2g26688 | CX2g021744 | LOC_Os02g51000 | Os02g0743800 | - | Detail |
| C2H2g25853 | 2:28,606,085-28,606,940 | - | C1H2g19131 | CX2g020534 | LOC_Os02g51010 | Os02g0743900 | CASP4, OsCASP4 | Detail |
| C2H2g21289 | 2:28,607,773-28,608,851 | + | C1H2g30910 | CX2g022263 | LOC_Os02g51020 | Os02g0744000 | - | Detail |
| C2H2g00809 | 2:28,617,908-28,620,323 | + | C1H2g05493 | CX2g019710 | LOC_Os02g51030 | Os02g0744100 | - | Detail |
| C2H2g22842 | 2:28,629,829-28,630,897 | + | C1H2g28698 | CX2g024332 | LOC_Os02g51040 | Os02g0744200 | - | Detail |
| C2H2g01303 | 2:28,635,470-28,639,402 | - | C1H2g29538 | CX2g024594 | LOC_Os02g51060 | Os02g0744600 | OsCSLA6 | Detail |
| C2H2g07487 | 2:28,640,951-28,645,897 | - | C1H2g23191 | CX2g022323 | LOC_Os02g51070 | Os02g0744700 | OsSSII-2 | Detail |
| C2H2g08168 | 2:28,653,125-28,655,257 | + | C1H2g05032 | CX2g022360 | LOC_Os02g51080 | Os02g0744900 | LYL1, OsChl P, OsGGRI, OsGGR1 | Detail |
| C2H2g17927 | 2:28,660,430-28,663,324 | - | C1H2g28990 | CX2g022714 | LOC_Os02g51100 | Os02g0745000 | - | Detail |
| C2H2g17969 | 2:28,671,089-28,674,189 | + | C1H2g29361 | CX2g021804 | LOC_Os02g51110 | Os02g0745100 | LSI1, lsi1, NIP2-1, OsNIP2;1, NIP2;1, OsLsi1 | Detail |
| C2H2g17512 | 2:28,681,902-28,687,738 | - | C1H2g10044 | - | - | - | - | Detail |
| C2H2g06955 | 2:28,685,325-28,687,481 | + | C1H2g22873 | CX2g024809 | LOC_Os02g42970 | Os02g0745300 | - | Detail |
| C2H2g19332 | 2:28,694,298-28,696,257 | + | C1H2g26267 | CX2g024083 | LOC_Os02g51130 | Os02g0745400 | - | Detail |
| C2H2g29488 | 2:28,697,677-28,698,186 | + | C1H2g29615 | CX2g019686 | LOC_Os02g51140 | Os02g0745600 | OsNRP3 | Detail |
| C2H2g06018 | 2:28,698,248-28,704,122 | + | C1H2g29615 | CX2g019686 | LOC_Os02g51140 | Os02g0745600 | OsNRP3 | Detail |
| C2H2g18017 | 2:28,705,109-28,707,292 | + | C1H2g00830 | CX2g024841 | LOC_Os02g51150 | Os02g0745700 | - | Detail |
| C2H2g26607 | 2:28,709,067-28,712,633 | + | C1H2g30172 | CX2g020073 | LOC_Os02g51160 | Os02g0745800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |