| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g04890 | 9:19,069,124-19,073,047 | + | C2H9g17992 | CX9g056849 | LOC_Os09g39380 | Os09g0567300 | MDHAR, OsMDHAR, OsMDAR3, OsMDHAR3 | Detail |
| C1H9g13266 | 9:19,073,094-19,076,233 | + | C2H9g25680 | CX9g058049 | LOC_Os09g39390 | Os09g0567366 | - | Detail |
| C1H9g16090 | 9:19,078,531-19,081,006 | + | C2H9g00653 | CX9g056022 | LOC_Os09g39400 | Os09g0567400 | - | Detail |
| C1H9g25909 | 9:19,085,026-19,090,786 | + | C2H9g10548 | CX9g057497 | LOC_Os09g39410 | Os09g0567500 | - | Detail |
| C1H9g01897 | 9:19,091,906-19,096,902 | + | C2H9g15634 | CX9g055257 | LOC_Os09g39420 | Os09g0567700 | - | Detail |
| C1H9g27590 | 9:19,096,960-19,100,398 | - | C2H9g07527 | CX9g058075 | LOC_Os09g39430 | Os09g0567800 | - | Detail |
| C1H9g04610 | 9:19,103,896-19,106,558 | - | C2H9g28844 | CX9g058045 | LOC_Os09g39440 | Os09g0567900 | - | Detail |
| C1H9g06631 | 9:19,108,871-19,113,014 | + | C2H9g14034 | CX9g055030 | LOC_Os09g39462 | Os09g0568000 | - | Detail |
| C1H9g15019 | 9:19,113,667-19,113,891 | + | - | CX9g058185 | - | - | - | Detail |
| C1H9g18800 | 9:19,114,406-19,115,801 | + | C2H9g07303 | CX9g055723 | LOC_Os09g39474 | Os09g0568100 | - | Detail |
| C1H9g25533 | 9:19,116,932-19,117,909 | - | C2H9g14146 | CX9g055477 | LOC_Os09g39490 | Os09g0568200 | - | Detail |
| C1H9g00933 | 9:19,121,436-19,122,161 | - | - | CX9g056373 | LOC_Os09g39510 | Os09g0568500 | - | Detail |
| C1H9g05388 | 9:19,125,266-19,125,907 | - | - | CX9g056956 | LOC_Os09g39520 | Os09g0568600 | - | Detail |
| C1H9g08565 | 9:19,127,695-19,128,339 | - | - | CX9g057185 | LOC_Os09g39530 | Os09g0568700 | - | Detail |
| C1H9g27100 | 9:19,129,439-19,130,916 | - | C2H9g28333 | CX9g057377 | LOC_Os09g39540 | Os09g0568800 | - | Detail |
| C1H9g30656 | 9:19,131,188-19,133,085 | + | C2H9g03364 | CX9g055404 | LOC_Os09g39550 | Os09g0568900 | IF1-2, IF<sub>1</sub>-2 | Detail |
| C1H9g22287 | 9:19,134,907-19,136,848 | + | C2H9g03868 | CX9g057720 | LOC_Os09g39560 | Os09g0569100 | - | Detail |
| C1H9g23985 | 9:19,140,226-19,140,612 | + | C2H9g00291 | CX9g057873 | - | - | - | Detail |
| C1H9g14979 | 9:19,141,650-19,145,064 | + | C2H9g00291 | CX9g057873 | LOC_Os09g39570 | Os09g0569200 | - | Detail |
| C1H9g21337 | 9:19,145,011-19,148,481 | - | C2H9g21708 | CX9g056948 | LOC_Os09g39580 | Os09g0569300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g12105 | 12:22,017,185-22,017,754 | + | C1H12g08247 | CX12g017642 | LOC_Os12g42040 | Os12g0614851 | - | Detail |
| C2H12g16999 | 12:22,018,577-22,022,608 | + | C1H12g00787 | CX12g017528 | LOC_Os12g42070 | Os12g0615300 | - | Detail |
| C2H12g17332 | 12:22,026,154-22,028,498 | - | C1H12g10003 | CX12g017746 | LOC_Os12g42090 | Os12g0615400 | - | Detail |
| C2H12g09885 | 12:22,028,747-22,040,621 | - | C1H12g19189 | CX12g016225 | LOC_Os12g42100 | Os12g0615500 | - | Detail |
| C2H12g25758 | 12:22,042,472-22,047,614 | + | C1H12g24790 | CX12g016120 | LOC_Os12g42130 | Os12g0615700 | - | Detail |
| C2H12g14277 | 12:22,049,626-22,052,160 | - | C1H12g13396 | CX12g017685 | LOC_Os12g42140 | Os12g0615800 | - | Detail |
| C2H12g05828 | 12:22,053,798-22,055,649 | + | C1H12g23697 | CX12g018419 | LOC_Os12g42150 | Os12g0615900 | - | Detail |
| C2H12g19654 | 12:22,057,315-22,061,983 | - | C1H12g23784 | CX12g017773 | LOC_Os12g42160 | Os12g0616000 | - | Detail |
| C2H12g20626 | 12:22,064,101-22,064,715 | - | C1H12g24997 | CX12g018174 | LOC_Os12g42170 | - | - | Detail |
| C2H12g13831 | 12:22,065,267-22,067,467 | - | C1H12g24509 | CX12g017357 | LOC_Os12g42180 | Os12g0616200 | - | Detail |
| C2H12g02043 | 12:22,075,438-22,077,537 | + | C1H12g24812 | CX12g018766 | LOC_Os12g42190 | Os12g0616400 | OsPCF8, PCF8 | Detail |
| C2H12g13575 | 12:22,094,643-22,101,507 | + | C1H12g09845 | CX12g017815 | LOC_Os12g42200 | Os12g0616500 | - | Detail |
| C2H12g18339 | 12:22,102,092-22,106,683 | + | C1H12g18036 | CX12g016627 | LOC_Os12g42210 | Os12g0616600 | - | Detail |
| C2H12g14540 | 12:22,115,480-22,116,283 | - | C1H12g28752 | CX12g017462 | LOC_Os12g42220 | Os12g0616800 | - | Detail |
| C2H12g22956 | 12:22,122,876-22,125,898 | + | C1H12g11680 | CX12g015655 | LOC_Os12g42230 | Os12g0616900 | - | Detail |
| C2H12g27369 | 12:22,131,884-22,132,495 | - | C1H12g16058 | CX12g018652 | LOC_Os12g42250 | Os12g0617000 | PINE1, DEC1 | Detail |
| C2H12g18617 | 12:22,141,795-22,147,737 | - | C1H12g09207 | CX12g017918 | LOC_Os12g42260 | Os12g0617100 | - | Detail |
| C2H12g17972 | 12:22,177,782-22,179,620 | + | C1H12g12970 | CX12g015404 | LOC_Os12g42280 | Os12g0617400 | OsNCED5 | Detail |
| C2H12g07294 | 12:22,212,858-22,218,896 | - | C1H12g01907 | CX12g018530 | LOC_Os12g42300 | Os12g0617800 | - | Detail |
| C2H12g05116 | 12:22,219,591-22,228,543 | - | C1H12g22694 | CX12g018388 | LOC_Os12g42310 | Os12g0617900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |