| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g04890 | 9:19,069,124-19,073,047 | + | C2H9g17992 | CX9g056849 | LOC_Os09g39380 | Os09g0567300 | MDHAR, OsMDHAR, OsMDAR3, OsMDHAR3 | Detail |
| C1H9g13266 | 9:19,073,094-19,076,233 | + | C2H9g25680 | CX9g058049 | LOC_Os09g39390 | Os09g0567366 | - | Detail |
| C1H9g16090 | 9:19,078,531-19,081,006 | + | C2H9g00653 | CX9g056022 | LOC_Os09g39400 | Os09g0567400 | - | Detail |
| C1H9g25909 | 9:19,085,026-19,090,786 | + | C2H9g10548 | CX9g057497 | LOC_Os09g39410 | Os09g0567500 | - | Detail |
| C1H9g01897 | 9:19,091,906-19,096,902 | + | C2H9g15634 | CX9g055257 | LOC_Os09g39420 | Os09g0567700 | - | Detail |
| C1H9g27590 | 9:19,096,960-19,100,398 | - | C2H9g07527 | CX9g058075 | LOC_Os09g39430 | Os09g0567800 | - | Detail |
| C1H9g04610 | 9:19,103,896-19,106,558 | - | C2H9g28844 | CX9g058045 | LOC_Os09g39440 | Os09g0567900 | - | Detail |
| C1H9g06631 | 9:19,108,871-19,113,014 | + | C2H9g14034 | CX9g055030 | LOC_Os09g39462 | Os09g0568000 | - | Detail |
| C1H9g15019 | 9:19,113,667-19,113,891 | + | - | CX9g058185 | - | - | - | Detail |
| C1H9g18800 | 9:19,114,406-19,115,801 | + | C2H9g07303 | CX9g055723 | LOC_Os09g39474 | Os09g0568100 | - | Detail |
| C1H9g25533 | 9:19,116,932-19,117,909 | - | C2H9g14146 | CX9g055477 | LOC_Os09g39490 | Os09g0568200 | - | Detail |
| C1H9g00933 | 9:19,121,436-19,122,161 | - | - | CX9g056373 | LOC_Os09g39510 | Os09g0568500 | - | Detail |
| C1H9g05388 | 9:19,125,266-19,125,907 | - | - | CX9g056956 | LOC_Os09g39520 | Os09g0568600 | - | Detail |
| C1H9g08565 | 9:19,127,695-19,128,339 | - | - | CX9g057185 | LOC_Os09g39530 | Os09g0568700 | - | Detail |
| C1H9g27100 | 9:19,129,439-19,130,916 | - | C2H9g28333 | CX9g057377 | LOC_Os09g39540 | Os09g0568800 | - | Detail |
| C1H9g30656 | 9:19,131,188-19,133,085 | + | C2H9g03364 | CX9g055404 | LOC_Os09g39550 | Os09g0568900 | IF1-2, IF<sub>1</sub>-2 | Detail |
| C1H9g22287 | 9:19,134,907-19,136,848 | + | C2H9g03868 | CX9g057720 | LOC_Os09g39560 | Os09g0569100 | - | Detail |
| C1H9g23985 | 9:19,140,226-19,140,612 | + | C2H9g00291 | CX9g057873 | - | - | - | Detail |
| C1H9g14979 | 9:19,141,650-19,145,064 | + | C2H9g00291 | CX9g057873 | LOC_Os09g39570 | Os09g0569200 | - | Detail |
| C1H9g21337 | 9:19,145,011-19,148,481 | - | C2H9g21708 | CX9g056948 | LOC_Os09g39580 | Os09g0569300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g09262 | 12:18,800,418-18,803,937 | + | C1H12g03891 | CX12g018147 | LOC_Os12g36920 | Os12g0556300 | - | Detail |
| C2H12g11150 | 12:18,805,035-18,806,337 | + | C1H12g06829 | CX8g052356 | LOC_Os12g36930 | Os12g0556400 | - | Detail |
| C2H12g23361 | 12:18,813,061-18,813,861 | + | C1H12g14972 | - | LOC_Os12g36940 | Os12g0556500 | - | Detail |
| C2H12g12821 | 12:18,816,047-18,819,009 | + | C1H12g14972 | CX12g015253 | LOC_Os12g36940 | Os12g0556500 | - | Detail |
| C2H12g18748 | 12:18,819,368-18,826,057 | - | C1H12g05821 | CX12g015590 | LOC_Os12g36950 | Os12g0556600 | - | Detail |
| C2H12g11931 | 12:18,833,368-18,835,313 | - | - | - | LOC_Os12g36980 | - | - | Detail |
| C2H12g25705 | 12:18,833,408-18,834,322 | + | C1H12g07787 | CX12g015612 | - | Os12g0556900 | - | Detail |
| C2H12g25247 | 12:18,843,635-18,846,092 | - | C1H12g18268 | CX12g015582 | LOC_Os12g37060 | Os12g0557400 | - | Detail |
| C2H12g23419 | 12:18,856,190-18,861,166 | - | C1H12g31144 | - | LOC_Os12g37090 | - | - | Detail |
| C2H12g21316 | 12:18,862,049-18,862,264 | + | C1H12g06447 | CX12g018720 | - | - | - | Detail |
| C2H12g19817 | 12:18,866,222-18,867,846 | + | C1H12g07707 | CX12g017897 | LOC_Os12g37110 | Os12g0557900 | - | Detail |
| C2H12g04617 | 12:18,886,050-18,887,832 | + | C1H12g04518 | CX12g018225 | LOC_Os12g37150 | Os12g0558366 | - | Detail |
| C2H12g16245 | 12:18,896,098-18,898,799 | - | C1H12g07707 | CX12g016402 | LOC_Os12g37110 | Os12g0558400 | - | Detail |
| C2H12g29720 | 12:18,919,493-18,927,226 | - | C1H12g26566 | CX12g016947 | LOC_Os12g37350 | Os12g0559934 | - | Detail |
| C2H12g24459 | 12:18,993,414-18,994,699 | - | C1H12g24308 | CX12g015274 | LOC_Os12g37200 | - | - | Detail |
| C2H12g19876 | 12:18,994,976-18,996,033 | - | C1H12g01299 | CX12g016280 | LOC_Os12g37200 | - | - | Detail |
| C2H12g28804 | 12:18,996,789-18,999,197 | - | C1H12g00340 | CX12g015274 | LOC_Os12g37200 | - | - | Detail |
| C2H12g29902 | 12:19,032,743-19,033,059 | - | C1H8g04458 | CX12g015710 | - | - | - | Detail |
| C2H12g13956 | 12:19,034,873-19,035,231 | - | - | CX12g018381 | - | Os12g0108200 | - | Detail |
| C2H12g24488 | 12:19,035,599-19,044,611 | - | C1H12g26566 | CX12g015065 | LOC_Os12g37260 | Os12g0559934 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |