| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g16516 | 9:18,781,081-18,784,060 | - | C2H9g11187 | CX9g056989 | LOC_Os09g38750 | Os09g0560400 | - | Detail |
| C1H9g03926 | 9:18,784,309-18,787,769 | + | C2H9g11268 | CX9g056436 | LOC_Os09g38755 | Os09g0560450 | - | Detail |
| C1H9g25922 | 9:18,788,830-18,789,888 | + | C2H9g20950 | CX9g057721 | LOC_Os09g38759 | Os09g0560500 | - | Detail |
| C1H9g27653 | 9:18,790,640-18,792,824 | + | C2H9g17838 | CX9g054913 | LOC_Os09g38768 | Os09g0560600 | - | Detail |
| C1H9g00606 | 9:18,793,614-18,796,090 | + | C2H9g22121 | CX9g055954 | LOC_Os09g38772 | Os09g0560700 | - | Detail |
| C1H9g04369 | 9:18,795,128-18,802,136 | - | C2H9g18757 | CX9g055464 | LOC_Os09g38784 | Os09g0560850 | - | Detail |
| C1H9g02125 | 9:18,797,080-18,799,775 | + | C2H9g11291 | CX9g055954 | LOC_Os09g38777 | Os09g0560800 | - | Detail |
| C1H9g29491 | 9:18,802,790-18,807,223 | - | C2H9g18757 | CX9g056926 | LOC_Os09g38790 | Os09g0560900 | SIP1 | Detail |
| C1H9g03389 | 9:18,807,938-18,810,000 | + | C2H9g00048 | - | LOC_Os09g38800 | Os09g0561000 | - | Detail |
| C1H9g11670 | 9:18,824,298-18,828,071 | + | C2H9g28628 | CX9g057226 | LOC_Os09g38834 | Os09g0561450 | - | Detail |
| C1H9g10532 | 9:18,828,559-18,831,491 | + | C2H9g07673 | CX9g057226 | LOC_Os09g38840 | Os09g0561500 | WAK90, OsWAK90 | Detail |
| C1H9g28362 | 9:18,832,308-18,835,407 | + | C2H9g04667 | - | LOC_Os09g38850 | Os09g0561600 | DEES1, WAK91, OsWAK91, OsDEES1 | Detail |
| C1H9g04110 | 9:18,843,619-18,847,509 | + | C2H9g09243 | - | LOC_Os09g38900 | Os09g0562400 | - | Detail |
| C1H9g19363 | 9:18,851,650-18,854,226 | + | C2H9g11141 | CX9g057226 | LOC_Os09g38910 | Os09g0562600 | WAK92, OsWAK92, OsDEES1-L4 | Detail |
| C1H9g18815 | 9:18,854,692-18,856,575 | - | C2H9g27162 | CX9g057033 | LOC_Os09g38920 | Os09g0497500 | - | Detail |
| C1H9g04134 | 9:18,857,654-18,864,956 | - | C2H9g03456 | CX9g057411 | LOC_Os09g38930 | Os09g0562750 | - | Detail |
| C1H9g07046 | 9:18,876,099-18,876,873 | + | C2H9g09986 | CX9g055362 | LOC_Os09g38670 | Os09g0559600 | - | Detail |
| C1H9g06523 | 9:18,878,851-18,884,646 | - | C2H9g06709 | CX9g055046 | LOC_Os09g38960 | Os09g0563200 | OsHAK18 | Detail |
| C1H9g19754 | 9:18,888,055-18,893,651 | + | C2H9g01538 | CX9g057500 | LOC_Os09g38970 | Os09g0563250 | - | Detail |
| C1H9g21219 | 9:18,894,185-18,898,267 | + | C2H9g16021 | CX9g054934 | LOC_Os09g38980 | Os09g0563300 | TCD9, OsCPn60alpha3, OsCPn60α3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g27679 | 5:21,446,809-21,448,424 | + | C1H5g21636 | CX5g038171 | LOC_Os05g43930 | Os05g0515500 | OsASMT3 | Detail |
| C2H5g07980 | 5:21,459,705-21,461,313 | - | C1H5g21636 | CX5g038512 | LOC_Os05g43940 | Os05g0515600 | OsCOMT9 | Detail |
| C2H5g04015 | 5:21,465,959-21,469,788 | + | C1H5g00839 | CX5g037498 | LOC_Os05g43950 | Os05g0515700 | OsVOZ2 | Detail |
| C2H5g16276 | 5:21,470,543-21,472,216 | - | C1H5g13776 | CX5g039793 | LOC_Os05g43960 | Os05g0415400 | OsNAC24 | Detail |
| C2H5g17758 | 5:21,472,580-21,476,442 | + | C1H5g03749 | CX5g038707 | LOC_Os05g43970 | Os05g0515900 | - | Detail |
| C2H5g19371 | 5:21,479,854-21,480,213 | - | C1H5g20589 | CX5g039772 | LOC_Os01g54800 | Os05g0516100 | - | Detail |
| C2H5g04233 | 5:21,484,053-21,486,164 | + | C1H5g26916 | CX5g039979 | LOC_Os05g44020 | Os05g0516300 | - | Detail |
| C2H5g24477 | 5:21,488,412-21,490,154 | + | - | - | - | - | - | Detail |
| C2H5g15773 | 5:21,488,859-21,489,953 | - | C1H5g24467 | CX5g039876 | - | Os05g0516475 | - | Detail |
| C2H5g13797 | 5:21,491,603-21,493,790 | + | C1H5g19283 | CX5g038417 | LOC_Os05g44030 | Os05g0516400 | - | Detail |
| C2H5g04641 | 5:21,495,897-21,498,588 | + | C1H5g14981 | CX5g039493 | LOC_Os05g44050 | Os05g0516600 | OsRab7, OsRab7B3 | Detail |
| C2H5g05743 | 5:21,499,514-21,500,047 | + | C1H5g10610 | CX5g041146 | LOC_Os05g44060 | Os05g0516700 | - | Detail |
| C2H5g24588 | 5:21,500,787-21,502,519 | - | C1H5g21266 | CX5g039048 | LOC_Os05g44070 | Os05g0516800 | - | Detail |
| C2H5g20039 | 5:21,504,562-21,510,450 | + | C1H5g05035 | CX5g039615 | LOC_Os05g44080 | Os05g0516900 | OsMac3 | Detail |
| C2H5g04869 | 5:21,511,527-21,512,471 | - | C1H5g21400 | CX5g038718 | LOC_Os05g44090 | Os05g0517100 | - | Detail |
| C2H5g18358 | 5:21,517,765-21,522,525 | + | C1H5g00428 | CX5g040204 | LOC_Os05g44100 | Os05g0517200 | - | Detail |
| C2H5g21345 | 5:21,525,685-21,526,736 | + | C1H5g00439 | CX5g037887 | LOC_Os05g44120 | Os05g0517400 | - | Detail |
| C2H5g27310 | 5:21,528,516-21,532,703 | - | C1H5g15240 | CX5g040072 | LOC_Os05g44130 | Os05g0517500 | - | Detail |
| C2H5g03251 | 5:21,533,871-21,537,153 | - | C1H5g27527 | CX5g039695 | LOC_Os05g44140 | Os05g0517600 | Hb5 | Detail |
| C2H5g27370 | 5:21,538,256-21,540,460 | + | C1H5g21769 | CX5g040040 | LOC_Os05g44160 | Os05g0517800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |