| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g21016 | 9:18,501,047-18,504,974 | + | C2H7g00302 | CX9g055465 | - | - | - | Detail |
| C1H9g28461 | 9:18,510,295-18,511,647 | - | C2H9g23507 | CX9g056277 | LOC_Os09g38340 | Os09g0555700 | - | Detail |
| C1H9g30322 | 9:18,514,651-18,515,383 | - | C2H9g03686 | CX9g056277 | LOC_Os09g38340 | Os09g0555700 | - | Detail |
| C1H9g19146 | 9:18,530,432-18,532,450 | - | C2H9g16440 | CX9g056374 | LOC_Os09g38350 | Os09g0555800 | OsCNL2 | Detail |
| C1H9g02315 | 9:18,540,182-18,542,801 | - | C2H9g26103 | CX9g056720 | LOC_Os09g38370 | Os09g0556000 | - | Detail |
| C1H9g14465 | 9:18,546,031-18,550,126 | + | C2H9g08303 | CX9g056177 | LOC_Os09g38390 | Os09g0556200 | - | Detail |
| C1H9g23531 | 9:18,552,505-18,554,904 | + | C2H9g24654 | CX9g056439 | LOC_Os09g38400 | - | - | Detail |
| C1H9g23011 | 9:18,554,370-18,554,663 | - | - | - | - | - | - | Detail |
| C1H9g07170 | 9:18,555,845-18,561,822 | - | C2H9g15218 | CX9g057830 | LOC_Os09g38410 | Os09g0556400 | OsPHT4;5 | Detail |
| C1H9g24737 | 9:18,562,789-18,568,502 | - | C2H9g15403 | CX9g056846 | LOC_Os09g38420 | Os09g0556500 | - | Detail |
| C1H9g30681 | 9:18,571,412-18,582,066 | + | C2H9g02251 | CX9g057664 | LOC_Os09g38440 | Os09g0556700 | - | Detail |
| C1H9g19768 | 9:18,582,183-18,584,363 | - | C2H9g19914 | CX9g058159 | LOC_Os09g38450 | Os09g0556800 | - | Detail |
| C1H9g29064 | 9:18,588,477-18,590,267 | + | C2H9g21049 | CX9g054863 | LOC_Os09g38470 | Os09g0558600 | - | Detail |
| C1H9g16942 | 9:18,592,560-18,594,685 | + | C2H9g08319 | CX9g057682 | LOC_Os09g38490 | Os09g0558600 | - | Detail |
| C1H9g30179 | 9:18,597,586-18,598,436 | - | C2H9g11110 | CX9g057136 | LOC_Os09g38500 | Os09g0557400 | - | Detail |
| C1H9g28316 | 9:18,599,282-18,601,400 | - | C2H9g27079 | CX9g055644 | LOC_Os09g38510 | Os09g0557500 | - | Detail |
| C1H9g26334 | 9:18,602,760-18,605,432 | - | C2H9g25699 | CX9g055537 | LOC_Os09g38520 | Os09g0557700 | OsCYBDOMG1 | Detail |
| C1H9g29950 | 9:18,609,729-18,613,628 | + | C2H9g21071 | CX9g056733 | LOC_Os09g38530 | Os09g0557800 | - | Detail |
| C1H9g31843 | 9:18,614,152-18,614,752 | + | C2H9g22541 | CX9g056091 | LOC_Os09g38540 | Os09g0557900 | - | Detail |
| C1H9g10993 | 9:18,615,313-18,619,048 | - | C2H9g09128 | CX9g055672 | LOC_Os09g38550 | Os09g0558000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g17731 | 1:11,049,940-11,051,270 | - | C1H1g15186 | CX1g006057 | LOC_Os01g22540 | Os01g0328300 | - | Detail |
| C2H1g07485 | 1:11,052,721-11,061,583 | - | C1H1g04469 | CX1g003742 | LOC_Os01g22550 | Os01g0328900 | - | Detail |
| C2H1g09100 | 1:11,075,824-11,086,816 | - | C1H1g05350 | CX1g005773 | LOC_Os01g22570 | Os01g0329000 | - | Detail |
| C2H1g11900 | 1:11,081,351-11,081,761 | + | C1H1g04414 | - | - | - | - | Detail |
| C2H1g09369 | 1:11,081,817-11,082,890 | + | C1H1g04414 | - | - | - | - | Detail |
| C2H1g05958 | 1:11,105,700-11,108,293 | + | C1H1g22940 | CX1g001596 | LOC_Os01g22590 | Os01g0329300 | - | Detail |
| C2H1g26866 | 1:11,108,646-11,114,727 | - | C1H1g12319 | CX1g000240 | LOC_Os01g22600 | Os01g0329400 | - | Detail |
| C2H1g27428 | 1:11,120,485-11,126,202 | + | C1H1g03998 | CX1g004633 | LOC_Os01g22630 | Os01g0329800 | - | Detail |
| C2H1g01944 | 1:11,129,768-11,133,185 | + | C1H1g12639 | CX1g006655 | LOC_Os01g22640 | Os01g0329900 | - | Detail |
| C2H1g06794 | 1:11,142,259-11,145,557 | + | C1H1g19397 | CX1g007268 | LOC_Os01g22660 | Os01g0330100 | - | Detail |
| C2H1g22823 | 1:11,145,602-11,147,126 | - | C1H1g03743 | CX1g006180 | LOC_Os01g22670 | Os01g0330200 | - | Detail |
| C2H1g15539 | 1:11,150,665-11,151,861 | + | C1H1g15782 | CX1g005713 | LOC_Os01g22680 | Os01g0347500 | - | Detail |
| C2H1g24217 | 1:11,187,471-11,187,848 | + | C1H1g14705 | CX1g004068 | LOC_Os01g22780 | Os01g0331100 | - | Detail |
| C2H1g06111 | 1:11,191,186-11,192,642 | + | C1H1g09878 | CX1g004068 | LOC_Os01g22780 | Os01g0331100 | - | Detail |
| C2H1g00150 | 1:11,200,601-11,204,950 | + | C1H1g18229 | CX1g001443 | LOC_Os01g22870 | Os01g0331900 | - | Detail |
| C2H1g27905 | 1:11,215,583-11,219,624 | + | C1H1g29292 | CX1g005311 | LOC_Os01g22900 | Os01g0332100 | - | Detail |
| C2H1g02015 | 1:11,222,778-11,224,949 | - | C1H1g15812 | CX1g005606 | LOC_Os01g22910 | Os01g0332200 | GA2OX2, OsGA2ox2, ga2ox 2, OsGA2ox-2 | Detail |
| C2H1g12678 | 1:11,230,603-11,231,681 | - | C1H1g31043 | CX1g005606 | LOC_Os01g22920 | Os01g0332200 | GA2OX2, OsGA2ox2, ga2ox 2, OsGA2ox-2 | Detail |
| C2H1g25435 | 1:11,240,638-11,243,293 | + | C1H1g25028 | CX1g006261 | LOC_Os01g22954 | Os01g0332500 | - | Detail |
| C2H1g11384 | 1:11,248,919-11,254,259 | + | C1H1g00421 | CX1g005436 | LOC_Os01g22954 | Os01g0332500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |