| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g09840 | 9:18,366,642-18,367,800 | - | C2H9g28554 | CX9g056393 | LOC_Os09g37976 | Os09g0552600 | - | Detail |
| C1H9g15676 | 9:18,371,536-18,373,702 | + | C2H9g14226 | CX9g054872 | LOC_Os09g38000 | Os09g0552800 | OsNAC109, YL3 | Detail |
| C1H9g26813 | 9:18,376,273-18,378,404 | + | C2H9g12533 | CX9g057788 | LOC_Os09g38010 | Os09g0552900 | - | Detail |
| C1H9g21147 | 9:18,380,724-18,381,035 | - | C2H2g23208 | CX9g057780 | LOC_Os09g38020 | Os09g0553100 | - | Detail |
| C1H9g17635 | 9:18,385,462-18,390,603 | + | C2H9g10941 | CX9g055376 | LOC_Os09g38030 | Os09g0553200 | UGP1, Ugp1, OsUgp1, UGP2, UGP3 | Detail |
| C1H9g26934 | 9:18,391,442-18,394,187 | - | C2H9g21953 | CX9g058064 | LOC_Os09g38040 | Os09g0553300 | - | Detail |
| C1H9g10869 | 9:18,398,653-18,402,515 | + | C2H9g19006 | CX9g056104 | LOC_Os09g38060 | Os09g0553600 | - | Detail |
| C1H9g05696 | 9:18,405,039-18,405,896 | - | C2H9g11910 | - | LOC_Os09g38070 | Os09g0553700 | - | Detail |
| C1H9g00595 | 9:18,408,908-18,410,734 | + | C2H9g05592 | CX9g057943 | LOC_Os09g38080 | Os09g0553800 | - | Detail |
| C1H9g10302 | 9:18,411,472-18,414,138 | + | - | CX9g057138 | LOC_Os09g38090 | Os09g0553900 | - | Detail |
| C1H9g31011 | 9:18,415,061-18,417,614 | - | C2H9g14746 | CX9g057604 | LOC_Os09g38100 | Os09g0554000 | - | Detail |
| C1H9g27301 | 9:18,421,254-18,421,862 | - | C2H9g14838 | CX9g055725 | LOC_Os09g38110 | Os09g0554200 | - | Detail |
| C1H9g27672 | 9:18,429,105-18,433,133 | + | C2H9g06100 | CX9g057048 | LOC_Os09g38130 | Os09g0554300 | OsPILS7a | Detail |
| C1H9g18495 | 9:18,439,341-18,441,965 | + | C2H9g06100 | CX9g057828 | LOC_Os09g38210 | Os09g0555100 | - | Detail |
| C1H9g05514 | 9:18,444,982-18,446,160 | + | C2H9g22067 | CX9g057828 | LOC_Os09g38239 | Os09g0555150 | - | Detail |
| C1H9g12988 | 9:18,449,968-18,464,984 | + | C2H9g17283 | CX9g057564 | LOC_Os09g38268 | Os09g0555200 | OsNRPD1b, OsNRPD1 | Detail |
| C1H9g08888 | 9:18,466,459-18,468,222 | + | - | CX9g057692 | LOC_Os09g38300 | Os09g0555300 | - | Detail |
| C1H9g16951 | 9:18,470,967-18,472,877 | - | C2H9g07064 | CX9g057467 | LOC_Os09g38310 | Os09g0555400 | - | Detail |
| C1H9g00138 | 9:18,474,359-18,477,136 | - | C2H9g08531 | CX9g056693 | LOC_Os09g38320 | Os09g0555500 | OsPSY3 | Detail |
| C1H9g26155 | 9:18,480,718-18,489,628 | - | C2H9g15848 | CX9g056039 | LOC_Os09g38330 | Os09g0555600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g21051 | 2:4,892,634-4,895,733 | + | C1H2g30983 | CX2g020405 | LOC_Os02g10220 | Os02g0195800 | - | Detail |
| C2H2g18731 | 2:4,898,142-4,902,553 | + | C1H2g23532 | CX2g022453 | LOC_Os02g10230 | Os02g0196000 | - | Detail |
| C2H2g03179 | 2:4,905,683-4,907,478 | - | C1H2g09272 | CX2g023159 | - | Os02g0196100 | - | Detail |
| C2H2g21839 | 2:4,917,204-4,922,201 | - | C1H2g08478 | CX2g020960 | LOC_Os02g10260 | Os02g0196300 | - | Detail |
| C2H2g01825 | 2:4,927,133-4,933,338 | + | C1H2g15637 | CX2g024536 | LOC_Os02g10290 | Os02g0196600 | HMA4, OsHMA4 | Detail |
| C2H2g08200 | 2:4,934,143-4,936,515 | + | C1H2g31527 | CX2g019347 | LOC_Os02g10300 | Os02g0196700 | - | Detail |
| C2H2g29621 | 2:4,937,790-4,941,516 | - | C1H2g04707 | CX2g023163 | LOC_Os02g10310 | Os02g0196800 | - | Detail |
| C2H2g18849 | 2:4,945,694-4,949,532 | - | C1H2g20778 | CX2g019769 | LOC_Os02g10320 | Os02g0196900 | - | Detail |
| C2H2g03835 | 2:4,952,741-4,957,551 | + | C1H2g28814 | CX2g021812 | LOC_Os02g10350 | Os02g0197200 | - | Detail |
| C2H2g28704 | 2:4,974,909-4,975,199 | - | C1H2g29849 | CX2g019476 | LOC_Os02g10370 | Os02g0197400 | - | Detail |
| C2H2g03738 | 2:4,975,912-4,980,679 | - | C1H2g26101 | CX2g021613 | LOC_Os02g10380 | Os02g0197500 | - | Detail |
| C2H2g30082 | 2:4,981,187-4,983,217 | - | C1H2g09204 | CX2g024239 | LOC_Os02g10390 | Os02g0197600 | - | Detail |
| C2H2g23572 | 2:4,984,451-4,986,300 | - | C1H2g08703 | CX2g024372 | LOC_Os02g10400 | Os02g0197700 | - | Detail |
| C2H2g10563 | 2:4,990,335-4,991,237 | - | C1H2g03287 | CX2g019447 | LOC_Os02g10420 | Os02g0197750 | - | Detail |
| C2H2g12374 | 2:4,994,222-4,995,965 | - | C1H2g22400 | CX2g021268 | LOC_Os02g10430 | Os02g0197800 | - | Detail |
| C2H2g15896 | 2:4,998,551-5,005,501 | + | C1H2g26517 | CX2g021244 | LOC_Os02g10440 | Os02g0197900 | - | Detail |
| C2H2g26412 | 2:5,006,704-5,007,916 | - | C1H2g08367 | CX2g022220 | LOC_Os02g10450 | Os02g0198000 | - | Detail |
| C2H2g19596 | 2:5,023,346-5,025,490 | + | C1H2g01859 | CX2g023181 | LOC_Os02g10470 | Os02g0198200 | - | Detail |
| C2H2g27317 | 2:5,026,758-5,030,112 | + | C1H2g30719 | CX2g019285 | LOC_Os02g10480 | Os02g0198300 | OsAGAP | Detail |
| C2H2g04941 | 2:5,034,251-5,041,086 | - | C1H2g00925 | CX2g024056 | LOC_Os02g10490 | Os02g0198400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |