| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g09840 | 9:18,366,642-18,367,800 | - | C2H9g28554 | CX9g056393 | LOC_Os09g37976 | Os09g0552600 | - | Detail |
| C1H9g15676 | 9:18,371,536-18,373,702 | + | C2H9g14226 | CX9g054872 | LOC_Os09g38000 | Os09g0552800 | OsNAC109, YL3 | Detail |
| C1H9g26813 | 9:18,376,273-18,378,404 | + | C2H9g12533 | CX9g057788 | LOC_Os09g38010 | Os09g0552900 | - | Detail |
| C1H9g21147 | 9:18,380,724-18,381,035 | - | C2H2g23208 | CX9g057780 | LOC_Os09g38020 | Os09g0553100 | - | Detail |
| C1H9g17635 | 9:18,385,462-18,390,603 | + | C2H9g10941 | CX9g055376 | LOC_Os09g38030 | Os09g0553200 | UGP1, Ugp1, OsUgp1, UGP2, UGP3 | Detail |
| C1H9g26934 | 9:18,391,442-18,394,187 | - | C2H9g21953 | CX9g058064 | LOC_Os09g38040 | Os09g0553300 | - | Detail |
| C1H9g10869 | 9:18,398,653-18,402,515 | + | C2H9g19006 | CX9g056104 | LOC_Os09g38060 | Os09g0553600 | - | Detail |
| C1H9g05696 | 9:18,405,039-18,405,896 | - | C2H9g11910 | - | LOC_Os09g38070 | Os09g0553700 | - | Detail |
| C1H9g00595 | 9:18,408,908-18,410,734 | + | C2H9g05592 | CX9g057943 | LOC_Os09g38080 | Os09g0553800 | - | Detail |
| C1H9g10302 | 9:18,411,472-18,414,138 | + | - | CX9g057138 | LOC_Os09g38090 | Os09g0553900 | - | Detail |
| C1H9g31011 | 9:18,415,061-18,417,614 | - | C2H9g14746 | CX9g057604 | LOC_Os09g38100 | Os09g0554000 | - | Detail |
| C1H9g27301 | 9:18,421,254-18,421,862 | - | C2H9g14838 | CX9g055725 | LOC_Os09g38110 | Os09g0554200 | - | Detail |
| C1H9g27672 | 9:18,429,105-18,433,133 | + | C2H9g06100 | CX9g057048 | LOC_Os09g38130 | Os09g0554300 | OsPILS7a | Detail |
| C1H9g18495 | 9:18,439,341-18,441,965 | + | C2H9g06100 | CX9g057828 | LOC_Os09g38210 | Os09g0555100 | - | Detail |
| C1H9g05514 | 9:18,444,982-18,446,160 | + | C2H9g22067 | CX9g057828 | LOC_Os09g38239 | Os09g0555150 | - | Detail |
| C1H9g12988 | 9:18,449,968-18,464,984 | + | C2H9g17283 | CX9g057564 | LOC_Os09g38268 | Os09g0555200 | OsNRPD1b, OsNRPD1 | Detail |
| C1H9g08888 | 9:18,466,459-18,468,222 | + | - | CX9g057692 | LOC_Os09g38300 | Os09g0555300 | - | Detail |
| C1H9g16951 | 9:18,470,967-18,472,877 | - | C2H9g07064 | CX9g057467 | LOC_Os09g38310 | Os09g0555400 | - | Detail |
| C1H9g00138 | 9:18,474,359-18,477,136 | - | C2H9g08531 | CX9g056693 | LOC_Os09g38320 | Os09g0555500 | OsPSY3 | Detail |
| C1H9g26155 | 9:18,480,718-18,489,628 | - | C2H9g15848 | CX9g056039 | LOC_Os09g38330 | Os09g0555600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g26387 | 1:25,195,472-25,196,890 | + | C1H1g14493 | CX1g002143 | LOC_Os01g49240 | Os01g0686300 | - | Detail |
| C2H1g21728 | 1:25,200,204-25,204,999 | + | C1H1g17022 | CX1g000503 | LOC_Os01g49250 | Os01g0686400 | - | Detail |
| C2H1g16101 | 1:25,206,806-25,209,096 | + | C1H1g13243 | CX1g000245 | LOC_Os01g49260 | Os01g0686500 | - | Detail |
| C2H1g11919 | 1:25,212,502-25,214,823 | + | C1H1g17217 | CX1g005008 | LOC_Os01g49270 | Os01g0686600 | - | Detail |
| C2H1g06792 | 1:25,215,476-25,218,922 | - | C1H1g23518 | CX1g006716 | LOC_Os01g49280 | Os01g0686700 | - | Detail |
| C2H1g20895 | 1:25,220,603-25,221,278 | + | - | CX4g034487 | LOC_Os10g40770 | - | - | Detail |
| C2H1g18988 | 1:25,221,868-25,224,216 | + | C1H1g28000 | CX1g000667 | LOC_Os01g49290 | Os01g0686800 | - | Detail |
| C2H1g26696 | 1:25,228,015-25,233,196 | + | C1H1g24973 | CX1g006327 | LOC_Os01g49310 | Os01g0687300 | - | Detail |
| C2H1g29685 | 1:25,237,574-25,238,509 | - | C1H1g17002 | CX1g004166 | LOC_Os01g49320 | Os01g0687400 | - | Detail |
| C2H1g15847 | 1:25,241,628-25,242,539 | - | C1H1g24886 | CX1g002308 | LOC_Os01g49320 | Os01g0687400 | - | Detail |
| C2H1g12257 | 1:25,247,888-25,251,844 | + | C1H1g25078 | CX1g002582 | LOC_Os01g49330 | Os01g0687500 | - | Detail |
| C2H1g24499 | 1:25,254,307-25,256,526 | - | C1H1g30547 | CX1g004001 | LOC_Os01g49340 | Os01g0687600 | - | Detail |
| C2H1g11352 | 1:25,257,220-25,259,981 | - | C1H1g13249 | CX1g004559 | LOC_Os01g49350 | Os01g0687700 | - | Detail |
| C2H1g17351 | 1:25,261,872-25,265,161 | - | C1H1g18645 | CX1g000658 | LOC_Os01g49360 | Os01g0687800 | - | Detail |
| C2H1g02129 | 1:25,266,763-25,267,314 | - | C1H1g03295 | CX1g006320 | - | - | - | Detail |
| C2H1g03797 | 1:25,269,248-25,272,232 | - | C1H1g06737 | CX1g000285 | LOC_Os01g49380 | Os01g0688200 | - | Detail |
| C2H1g16538 | 1:25,302,082-25,302,885 | - | C1H1g05158 | CX1g004118 | LOC_Os01g49410 | Os01g0688600 | - | Detail |
| C2H1g05242 | 1:25,304,888-25,305,991 | - | C1H1g14442 | CX1g004763 | LOC_Os01g49430 | Os01g0688900 | - | Detail |
| C2H1g07708 | 1:25,306,527-25,306,829 | - | C1H1g14442 | CX1g000114 | LOC_Os01g49430 | Os01g0688900 | - | Detail |
| C2H1g18382 | 1:25,310,852-25,311,793 | + | C1H1g07960 | CX1g005316 | LOC_Os01g49440 | Os01g0689000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |